RNA–Protein interactions for RNA: ENST00000554062.5

PABPN1-204, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 3

Gene PABPN1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-204ENST00000554062 RARAP10276 462 aa6.98□□□□□ -1.29
PABPN1-204ENST00000554062 GTF2F1P35269 517 aaKnown RBP eCLIP6.98□□□□□ -1.291e-8■■□□□ 11.4
PABPN1-204ENST00000554062 COL9A2Q14055 689 aaPredicted RBP6.98□□□□□ -1.29
PABPN1-204ENST00000554062 SV2BQ7L1I2 683 aa6.98□□□□□ -1.29
PABPN1-204ENST00000554062 FAM177A1Q8N128 213 aaPredicted RBP6.98□□□□□ -1.29
PABPN1-204ENST00000554062 SEC16BQ96JE7 1060 aa6.98□□□□□ -1.29
PABPN1-204ENST00000554062 SPACA7Q96KW9 195 aa6.98□□□□□ -1.29
PABPN1-204ENST00000554062 CNTN3Q9P232 1028 aa6.98□□□□□ -1.29
PABPN1-204ENST00000554062 STRIP2Q9ULQ0 834 aa6.98□□□□□ -1.29
PABPN1-204ENST00000554062 PHF24Q9UPV7 400 aa6.98□□□□□ -1.29
PABPN1-204ENST00000554062 PCDHGB7Q9Y5F8 929 aa6.98□□□□□ -1.29
PABPN1-204ENST00000554062 A0A1W2PP55 124 aa6.97□□□□□ -1.29
PABPN1-204ENST00000554062 STK10O94804 968 aaKnown RBP6.97□□□□□ -1.29
PABPN1-204ENST00000554062 POLR3DP05423 398 aaPredicted RBP6.97□□□□□ -1.29
PABPN1-204ENST00000554062 NCLP19338 710 aaKnown RBP6.97□□□□□ -1.29
PABPN1-204ENST00000554062 PLAURQ03405 335 aa6.97□□□□□ -1.29
PABPN1-204ENST00000554062 CCDC85BQ15834 202 aaPredicted RBP6.97□□□□□ -1.29
PABPN1-204ENST00000554062 NBPF6Q5VWK0 638 aa6.97□□□□□ -1.29
PABPN1-204ENST00000554062 DTHD1Q6ZMT9 781 aa6.97□□□□□ -1.29
PABPN1-204ENST00000554062 NCAPG2Q86XI2 1143 aa6.97□□□□□ -1.29
PABPN1-204ENST00000554062 KIAA0825Q8IV33 1275 aa6.97□□□□□ -1.29
PABPN1-204ENST00000554062 CRIPAKQ8N1N5 446 aa6.97□□□□□ -1.29
PABPN1-204ENST00000554062 RASGRP4Q8TDF6 673 aa6.97□□□□□ -1.29
PABPN1-204ENST00000554062 NBPF4Q96M43 638 aa6.97□□□□□ -1.29
PABPN1-204ENST00000554062 OXCT2Q9BYC2 517 aaPredicted RBP6.97□□□□□ -1.29
PABPN1-204ENST00000554062 ZCCHC2Q9C0B9 1178 aaKnown RBP6.97□□□□□ -1.29
PABPN1-204ENST00000554062 NUCKS1Q9H1E3 243 aaKnown RBP6.97□□□□□ -1.29
PABPN1-204ENST00000554062 TMA7Q9Y2S6 64 aaKnown RBP6.97□□□□□ -1.29
PABPN1-204ENST00000554062 FIGNL2A6NMB9 653 aa6.96□□□□□ -1.3
PABPN1-204ENST00000554062 AXIN1O15169 862 aa6.96□□□□□ -1.3
PABPN1-204ENST00000554062 KIF4AO95239 1232 aa6.96□□□□□ -1.3
PABPN1-204ENST00000554062 GRNP28799 593 aaKnown RBP6.96□□□□□ -1.3
PABPN1-204ENST00000554062 RACK1P63244 317 aaKnown RBP6.96□□□□□ -1.3
PABPN1-204ENST00000554062 PKDCCQ504Y2 493 aa6.96□□□□□ -1.3
PABPN1-204ENST00000554062 DPH6Q7L8W6 267 aa6.96□□□□□ -1.3
PABPN1-204ENST00000554062 KLRG1Q96E93 195 aa6.96□□□□□ -1.3
PABPN1-204ENST00000554062 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.96□□□□□ -1.32e-30■■■■□ 20.6
PABPN1-204ENST00000554062 SPON2Q9BUD6 331 aa6.96□□□□□ -1.3
PABPN1-204ENST00000554062 GSX2Q9BZM3 304 aa6.96□□□□□ -1.3
PABPN1-204ENST00000554062 LIN7BQ9HAP6 207 aa6.96□□□□□ -1.3
PABPN1-204ENST00000554062 TLR7Q9NYK1 1049 aaKnown RBP6.96□□□□□ -1.3
PABPN1-204ENST00000554062 MARK1Q9P0L2 795 aa6.96□□□□□ -1.3
PABPN1-204ENST00000554062 SALL4Q9UJQ4 1053 aa6.96□□□□□ -1.3
PABPN1-204ENST00000554062 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.96□□□□□ -1.3
PABPN1-204ENST00000554062 TMEM238LA0A1B0GVL6 79 aa6.95□□□□□ -1.3
PABPN1-204ENST00000554062 KHNYNO15037 678 aaKnown RBP6.95□□□□□ -1.3
PABPN1-204ENST00000554062 SASH3O75995 380 aa6.95□□□□□ -1.3
PABPN1-204ENST00000554062 TNNI2P48788 182 aa6.95□□□□□ -1.3
PABPN1-204ENST00000554062 RBL2Q08999 1139 aa6.95□□□□□ -1.3
PABPN1-204ENST00000554062 PAK2Q13177 524 aa6.95□□□□□ -1.3
PABPN1-204ENST00000554062 RIPOR1Q6ZS17 1223 aa6.95□□□□□ -1.3
PABPN1-204ENST00000554062 C3orf58Q8NDZ4 430 aa6.95□□□□□ -1.3
PABPN1-204ENST00000554062 ZFP42Q96MM3 310 aa6.95□□□□□ -1.3
PABPN1-204ENST00000554062 DNAJC2Q99543 621 aaKnown RBP6.95□□□□□ -1.3
PABPN1-204ENST00000554062 RBSNQ9H1K0 784 aa6.95□□□□□ -1.3
PABPN1-204ENST00000554062 DNMT3LQ9UJW3 386 aa6.95□□□□□ -1.3
PABPN1-204ENST00000554062 MMP20O60882 483 aa6.94□□□□□ -1.3
PABPN1-204ENST00000554062 FGRP09769 529 aa6.94□□□□□ -1.3
PABPN1-204ENST00000554062 BMP1P13497 986 aa6.94□□□□□ -1.3
PABPN1-204ENST00000554062 ATF4P18848 351 aaPredicted RBP6.94□□□□□ -1.3
PABPN1-204ENST00000554062 NRLP54845 237 aa6.94□□□□□ -1.3
PABPN1-204ENST00000554062 FCGRTP55899 365 aa6.94□□□□□ -1.3
PABPN1-204ENST00000554062 SPEM2Q0P670 501 aa6.94□□□□□ -1.3
PABPN1-204ENST00000554062 RPS26P11Q5JNZ5 115 aaPredicted RBP6.94□□□□□ -1.3
PABPN1-204ENST00000554062 FAM182BQ5T319 152 aa6.94□□□□□ -1.3
PABPN1-204ENST00000554062 TRIM46Q7Z4K8 759 aa6.94□□□□□ -1.3
PABPN1-204ENST00000554062 CCNJLQ8IV13 435 aa6.94□□□□□ -1.3
PABPN1-204ENST00000554062 CKAP2LQ8IYA6 745 aa6.94□□□□□ -1.3
PABPN1-204ENST00000554062 TMEM74Q96NL1 305 aa6.94□□□□□ -1.3
PABPN1-204ENST00000554062 KBTBD4Q9NVX7 518 aa6.94□□□□□ -1.3
PABPN1-204ENST00000554062 KANSL3Q9P2N6 904 aa6.94□□□□□ -1.3
PABPN1-204ENST00000554062 ATXN7L1Q9ULK2 861 aaPredicted RBP6.94□□□□□ -1.3
PABPN1-204ENST00000554062 SAMM50Q9Y512 469 aa6.94□□□□□ -1.3
PABPN1-204ENST00000554062 DCDC2BA2VCK2 349 aa6.93□□□□□ -1.3
PABPN1-204ENST00000554062 EIF4EBP3O60516 100 aaPredicted RBP6.93□□□□□ -1.3
PABPN1-204ENST00000554062 NFKB1P19838 968 aa6.93□□□□□ -1.3
PABPN1-204ENST00000554062 TNP2Q05952 138 aa6.93□□□□□ -1.3
PABPN1-204ENST00000554062 LAPTM4AQ15012 233 aa6.93□□□□□ -1.3
PABPN1-204ENST00000554062 NFE2L2Q16236 605 aa6.93□□□□□ -1.3
PABPN1-204ENST00000554062 PEAR1Q5VY43 1037 aaPredicted RBP6.93□□□□□ -1.3
PABPN1-204ENST00000554062 FOXR1Q6PIV2 292 aa6.93□□□□□ -1.3
PABPN1-204ENST00000554062 TRIM22Q8IYM9 498 aa6.93□□□□□ -1.3
PABPN1-204ENST00000554062 GLIS3Q8NEA6 775 aa6.93□□□□□ -1.3
PABPN1-204ENST00000554062 DHX38Q92620 1227 aaKnown RBP6.93□□□□□ -1.3
PABPN1-204ENST00000554062 KIFC2Q96AC6 838 aa6.93□□□□□ -1.3
PABPN1-204ENST00000554062 LNPKQ9C0E8 428 aa6.93□□□□□ -1.3
PABPN1-204ENST00000554062 BHLHE41Q9C0J9 482 aaPredicted RBP6.93□□□□□ -1.3
PABPN1-204ENST00000554062 ABCB6Q9NP58 842 aa6.93□□□□□ -1.3
PABPN1-204ENST00000554062 AKAP2Q9Y2D5 859 aa6.93□□□□□ -1.3
PABPN1-204ENST00000554062 SMARCA5O60264 1052 aaPredicted RBP6.92□□□□□ -1.3
PABPN1-204ENST00000554062 SSBP05455 408 aaKnown RBP eCLIP6.92□□□□□ -1.3
PABPN1-204ENST00000554062 MAPTP10636 758 aaKnown RBP6.92□□□□□ -1.3
PABPN1-204ENST00000554062 LMNB1P20700 586 aa6.92□□□□□ -1.3
PABPN1-204ENST00000554062 ITPKAP23677 461 aa6.92□□□□□ -1.3
PABPN1-204ENST00000554062 TARSP26639 723 aaKnown RBP6.92□□□□□ -1.3
PABPN1-204ENST00000554062 GBP2P32456 591 aaPredicted RBP6.92□□□□□ -1.3
PABPN1-204ENST00000554062 RPS26P62854 115 aaKnown RBP6.92□□□□□ -1.3
PABPN1-204ENST00000554062 KRT25Q7Z3Z0 450 aa6.92□□□□□ -1.3
PABPN1-204ENST00000554062 OSMRQ99650 979 aa6.92□□□□□ -1.3
PABPN1-204ENST00000554062 SENP2Q9HC62 589 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms