RNA–Protein interactions for RNA: ENST00000553778.6

CFAP54-204, Transcript of cilia and flagella associated protein 54, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene CFAP54, Length 1,967 nt, Biotype non stop decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-204ENST00000553778 KDM3BQ7LBC6 1761 aa11.86□□□□□ -0.51
CFAP54-204ENST00000553778 TNNT1P13805 278 aa11.85□□□□□ -0.51
CFAP54-204ENST00000553778 HCLS1P14317 486 aaPredicted RBP11.85□□□□□ -0.51
CFAP54-204ENST00000553778 GSPT1P15170 499 aaKnown RBP11.85□□□□□ -0.51
CFAP54-204ENST00000553778 RFC4P35249 363 aa11.85□□□□□ -0.51
CFAP54-204ENST00000553778 TNNT3P45378 269 aaPredicted RBP11.85□□□□□ -0.51
CFAP54-204ENST00000553778 TTC22Q5TAA0 569 aa11.85□□□□□ -0.51
CFAP54-204ENST00000553778 SLC16A10Q8TF71 515 aa11.85□□□□□ -0.51
CFAP54-204ENST00000553778 TSR2Q969E8 191 aaKnown RBP11.85□□□□□ -0.51
CFAP54-204ENST00000553778 ZNF622Q969S3 477 aaKnown RBP eCLIP11.85□□□□□ -0.51
CFAP54-204ENST00000553778 ZBTB7BO15156 539 aaPredicted RBP11.85□□□□□ -0.51
CFAP54-204ENST00000553778 UBE2HP62256 183 aa11.85□□□□□ -0.51
CFAP54-204ENST00000553778 SMIM5Q71RC9 77 aa11.85□□□□□ -0.51
CFAP54-204ENST00000553778 ARHGEF1Q92888 912 aaKnown RBP11.85□□□□□ -0.51
CFAP54-204ENST00000553778 PDGFDQ9GZP0 370 aaPredicted RBP11.85□□□□□ -0.51
CFAP54-204ENST00000553778 TJP1Q07157 1748 aa11.84□□□□□ -0.51
CFAP54-204ENST00000553778 RPAP1Q9BWH6 1393 aaPredicted RBP11.84□□□□□ -0.51
CFAP54-204ENST00000553778 CCDC171Q6TFL3 1326 aa11.84□□□□□ -0.51
CFAP54-204ENST00000553778 ELL2O00472 640 aaPredicted RBP11.84□□□□□ -0.51
CFAP54-204ENST00000553778 HOXB7P09629 217 aa11.84□□□□□ -0.51
CFAP54-204ENST00000553778 IL6STP40189 918 aaPredicted RBP11.84□□□□□ -0.51
CFAP54-204ENST00000553778 EXOSC9Q06265 439 aaKnown RBP11.84□□□□□ -0.51
CFAP54-204ENST00000553778 KRT24Q2M2I5 525 aa11.84□□□□□ -0.51
CFAP54-204ENST00000553778 TEX35Q5T0J7 233 aa11.84□□□□□ -0.51
CFAP54-204ENST00000553778 AMIGO3Q86WK7 504 aa11.84□□□□□ -0.51
CFAP54-204ENST00000553778 TMX3Q96JJ7 454 aa11.84□□□□□ -0.51
CFAP54-204ENST00000553778 BCCIPQ9P287 314 aaKnown RBP eCLIP11.84□□□□□ -0.51
CFAP54-204ENST00000553778 ZNF330Q9Y3S2 320 aaPredicted RBP11.84□□□□□ -0.51
CFAP54-204ENST00000553778 COL5A3P25940 1745 aaPredicted RBP11.83□□□□□ -0.52
CFAP54-204ENST00000553778 A0A087WZG4 1122 aa11.83□□□□□ -0.52
CFAP54-204ENST00000553778 ERICH4A6NGS2 130 aa11.83□□□□□ -0.52
CFAP54-204ENST00000553778 USP48Q86UV5 1035 aa11.83□□□□□ -0.52
CFAP54-204ENST00000553778 PLEKHM2Q8IWE5 1019 aa11.83□□□□□ -0.52
CFAP54-204ENST00000553778 CICQ96RK0 1608 aaPredicted RBP11.83□□□□□ -0.52
CFAP54-204ENST00000553778 SOS1Q07889 1333 aaPredicted RBP11.83□□□□□ -0.52
CFAP54-204ENST00000553778 ZPR1O75312 459 aa11.83□□□□□ -0.52
CFAP54-204ENST00000553778 ZBTB7AO95365 584 aa11.83□□□□□ -0.52
CFAP54-204ENST00000553778 EIF5P55010 431 aaKnown RBP11.83□□□□□ -0.52
CFAP54-204ENST00000553778 ANAPC15P60006 121 aa11.83□□□□□ -0.52
CFAP54-204ENST00000553778 ICE2Q659A1 982 aa11.83□□□□□ -0.52
CFAP54-204ENST00000553778 C8orf58Q8NAV2 365 aa11.83□□□□□ -0.52
CFAP54-204ENST00000553778 KCND1Q9NSA2 647 aa11.83□□□□□ -0.52
CFAP54-204ENST00000553778 KIF2AO00139 706 aaPredicted RBP11.82□□□□□ -0.52
CFAP54-204ENST00000553778 ATP8B1O43520 1251 aa11.82□□□□□ -0.52
CFAP54-204ENST00000553778 DHX16O60231 1041 aaKnown RBP11.82□□□□□ -0.52
CFAP54-204ENST00000553778 PIP4K2AP48426 406 aaPredicted RBP11.82□□□□□ -0.52
CFAP54-204ENST00000553778 HDGFL1Q5TGJ6 251 aa11.82□□□□□ -0.52
CFAP54-204ENST00000553778 NECTIN2Q92692 538 aa11.82□□□□□ -0.52
CFAP54-204ENST00000553778 MYCBPQ99417 103 aaPredicted RBP11.82□□□□□ -0.52
CFAP54-204ENST00000553778 NCAPGQ9BPX3 1015 aa11.82□□□□□ -0.52
CFAP54-204ENST00000553778 MTFR1LQ9H019 292 aa11.82□□□□□ -0.52
CFAP54-204ENST00000553778 HDAC5Q9UQL6 1122 aa11.82□□□□□ -0.52
CFAP54-204ENST00000553778 V9GYY5 206 aaPredicted RBP11.82□□□□□ -0.52
CFAP54-204ENST00000553778 NEMFO60524 1076 aa11.81□□□□□ -0.52
CFAP54-204ENST00000553778 GADD45BO75293 160 aaPredicted RBP11.81□□□□□ -0.52
CFAP54-204ENST00000553778 MYL6BP14649 208 aa11.81□□□□□ -0.52
CFAP54-204ENST00000553778 H2AFXP16104 143 aaPredicted RBP11.81□□□□□ -0.52
CFAP54-204ENST00000553778 TPM4P67936 248 aa11.81□□□□□ -0.52
CFAP54-204ENST00000553778 TWISTNBQ3B726 338 aaPredicted RBP11.81□□□□□ -0.52
CFAP54-204ENST00000553778 FBXO38Q6PIJ6 1188 aa11.81□□□□□ -0.52
CFAP54-204ENST00000553778 SPON1Q9HCB6 807 aa11.81□□□□□ -0.52
CFAP54-204ENST00000553778 CWC15Q9P013 229 aaKnown RBP11.81□□□□□ -0.52
CFAP54-204ENST00000553778 RSPH14Q9UHP6 348 aa11.81□□□□□ -0.52
CFAP54-204ENST00000553778 MYH14Q7Z406 1995 aaKnown RBP11.81□□□□□ -0.52
CFAP54-204ENST00000553778 NBPF26B4DH59 902 aa11.81□□□□□ -0.52
CFAP54-204ENST00000553778 CASQ1P31415 396 aa11.81□□□□□ -0.52
CFAP54-204ENST00000553778 MAPK8IP2Q13387 824 aaPredicted RBP11.81□□□□□ -0.52
CFAP54-204ENST00000553778 CEP135Q66GS9 1140 aa11.81□□□□□ -0.52
CFAP54-204ENST00000553778 NBPF10Q6P3W6 841 aaKnown RBP11.81□□□□□ -0.52
CFAP54-204ENST00000553778 MPNDQ8N594 471 aa11.81□□□□□ -0.52
CFAP54-204ENST00000553778 NBPF15Q8N660 670 aa11.81□□□□□ -0.52
CFAP54-204ENST00000553778 ATF5Q9Y2D1 282 aaPredicted RBP11.81□□□□□ -0.52
CFAP54-204ENST00000553778 COL15A1P39059 1388 aa11.8□□□□□ -0.52
CFAP54-204ENST00000553778 ELP1O95163 1332 aa11.8□□□□□ -0.52
CFAP54-204ENST00000553778 AP5Z1O43299 807 aa11.8□□□□□ -0.52
CFAP54-204ENST00000553778 EPB41L2O43491 1005 aaKnown RBP11.8□□□□□ -0.52
CFAP54-204ENST00000553778 GTF2A1P52655 376 aaPredicted RBP11.8□□□□□ -0.52
CFAP54-204ENST00000553778 NLGN1Q8N2Q7 840 aa11.8□□□□□ -0.52
CFAP54-204ENST00000553778 TSPYL6Q8N831 410 aa11.8□□□□□ -0.52
CFAP54-204ENST00000553778 FAM200AQ8TCP9 573 aa11.8□□□□□ -0.52
CFAP54-204ENST00000553778 C16orf45Q96MC5 204 aaPredicted RBP11.8□□□□□ -0.52
CFAP54-204ENST00000553778 DBF4Q9UBU7 674 aaPredicted RBP11.8□□□□□ -0.52
CFAP54-204ENST00000553778 NARFQ9UHQ1 456 aa11.8□□□□□ -0.52
CFAP54-204ENST00000553778 UBR3Q6ZT12 1888 aa11.8□□□□□ -0.52
CFAP54-204ENST00000553778 PTPRCP08575 1304 aa11.8□□□□□ -0.52
CFAP54-204ENST00000553778 QSER1Q2KHR3 1735 aa11.8□□□□□ -0.52
CFAP54-204ENST00000553778 ERC2O15083 957 aa11.79□□□□□ -0.52
CFAP54-204ENST00000553778 CCDC192P0DO97 292 aa11.79□□□□□ -0.52
CFAP54-204ENST00000553778 GUCY2CP25092 1073 aa11.79□□□□□ -0.52
CFAP54-204ENST00000553778 CDC25BP30305 580 aa11.79□□□□□ -0.52
CFAP54-204ENST00000553778 GPS2Q13227 327 aa11.79□□□□□ -0.52
CFAP54-204ENST00000553778 CCDC30Q5VVM6 783 aa11.79□□□□□ -0.52
CFAP54-204ENST00000553778 DZIP3Q86Y13 1208 aaKnown RBP11.79□□□□□ -0.52
CFAP54-204ENST00000553778 TBC1D2BQ9UPU7 963 aa11.79□□□□□ -0.52
CFAP54-204ENST00000553778 ATP6V1DQ9Y5K8 247 aa11.79□□□□□ -0.52
CFAP54-204ENST00000553778 TUBGCP6Q96RT7 1819 aa11.79□□□□□ -0.52
CFAP54-204ENST00000553778 TUBB4AP04350 444 aa11.79□□□□□ -0.52
CFAP54-204ENST00000553778 PTGS1P23219 599 aa11.79□□□□□ -0.52
CFAP54-204ENST00000553778 POLD1P28340 1107 aa11.79□□□□□ -0.52
CFAP54-204ENST00000553778 PDIA6Q15084 440 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms