RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 FTOQ9C0B1 505 aaKnown RBP eCLIP8.22□□□□□ -1.09
LINC-ROR-201ENST00000553704 SPTLC3Q9NUV7 552 aa8.22□□□□□ -1.09
LINC-ROR-201ENST00000553704 NWD2Q9ULI1 1742 aa8.21□□□□□ -1.09
LINC-ROR-201ENST00000553704 A0A087WZG4 1122 aa8.21□□□□□ -1.09
LINC-ROR-201ENST00000553704 NR1I2O75469 434 aa8.21□□□□□ -1.09
LINC-ROR-201ENST00000553704 PDCP20941 246 aa8.21□□□□□ -1.09
LINC-ROR-201ENST00000553704 ANO6Q4KMQ2 910 aa8.21□□□□□ -1.09
LINC-ROR-201ENST00000553704 FAM200AQ8TCP9 573 aa8.21□□□□□ -1.09
LINC-ROR-201ENST00000553704 NEK1Q96PY6 1258 aa8.21□□□□□ -1.09
LINC-ROR-201ENST00000553704 RFX7Q2KHR2 1363 aa8.21□□□□□ -1.1
LINC-ROR-201ENST00000553704 PPFIA3O75145 1194 aa8.21□□□□□ -1.1
LINC-ROR-201ENST00000553704 SNRPA1P09661 255 aaKnown RBP8.21□□□□□ -1.1
LINC-ROR-201ENST00000553704 HSP90B1P14625 803 aaKnown RBP8.21□□□□□ -1.1
LINC-ROR-201ENST00000553704 SCRN1Q12765 414 aa8.21□□□□□ -1.1
LINC-ROR-201ENST00000553704 IFNL2Q8IZJ0 200 aa8.21□□□□□ -1.1
LINC-ROR-201ENST00000553704 MYRIPQ8NFW9 859 aa8.21□□□□□ -1.1
LINC-ROR-201ENST00000553704 HAUS7Q99871 368 aa8.21□□□□□ -1.1
LINC-ROR-201ENST00000553704 CBX8Q9HC52 389 aa8.21□□□□□ -1.1
LINC-ROR-201ENST00000553704 NBPF26B4DH59 902 aa8.2□□□□□ -1.1
LINC-ROR-201ENST00000553704 PTGS1P23219 599 aa8.2□□□□□ -1.1
LINC-ROR-201ENST00000553704 NBPF14Q5TI25 921 aa8.2□□□□□ -1.1
LINC-ROR-201ENST00000553704 NBPF10Q6P3W6 841 aaKnown RBP8.2□□□□□ -1.1
LINC-ROR-201ENST00000553704 LMBR1LQ6UX01 489 aa8.2□□□□□ -1.1
LINC-ROR-201ENST00000553704 PROSER2Q86WR7 435 aaPredicted RBP8.2□□□□□ -1.1
LINC-ROR-201ENST00000553704 TTC5Q8N0Z6 440 aa8.2□□□□□ -1.1
LINC-ROR-201ENST00000553704 ZNF710Q8N1W2 664 aa8.2□□□□□ -1.1
LINC-ROR-201ENST00000553704 NBPF15Q8N660 670 aa8.2□□□□□ -1.1
LINC-ROR-201ENST00000553704 KIAA1524Q8TCG1 905 aa8.2□□□□□ -1.1
LINC-ROR-201ENST00000553704 TNMDQ9H2S6 317 aa8.2□□□□□ -1.1
LINC-ROR-201ENST00000553704 DNAJC5Q9H3Z4 198 aa8.2□□□□□ -1.1
LINC-ROR-201ENST00000553704 CLSTN2Q9H4D0 955 aa8.2□□□□□ -1.1
LINC-ROR-201ENST00000553704 PAPPAQ13219 1627 aa8.2□□□□□ -1.1
LINC-ROR-201ENST00000553704 CTDNEP1O95476 244 aa8.2□□□□□ -1.1
LINC-ROR-201ENST00000553704 CSB-PGBD3P0DP91 1061 aa8.2□□□□□ -1.1
LINC-ROR-201ENST00000553704 FOXO4P98177 505 aa8.2□□□□□ -1.1
LINC-ROR-201ENST00000553704 GLIPR1L2Q4G1C9 344 aa8.2□□□□□ -1.1
LINC-ROR-201ENST00000553704 RBM43Q6ZSC3 357 aaKnown RBP8.2□□□□□ -1.1
LINC-ROR-201ENST00000553704 ATG9AQ7Z3C6 839 aa8.2□□□□□ -1.1
LINC-ROR-201ENST00000553704 FMNL2Q96PY5 1086 aa8.2□□□□□ -1.1
LINC-ROR-201ENST00000553704 PALLDQ8WX93 1383 aa8.2□□□□□ -1.1
LINC-ROR-201ENST00000553704 DDX60Q8IY21 1712 aaKnown RBP8.2□□□□□ -1.1
LINC-ROR-201ENST00000553704 A0A087WWV3 80 aa8.19□□□□□ -1.1
LINC-ROR-201ENST00000553704 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.19□□□□□ -1.1
LINC-ROR-201ENST00000553704 GOLIM4O00461 696 aa8.19□□□□□ -1.1
LINC-ROR-201ENST00000553704 TRHP20396 242 aaPredicted RBP8.19□□□□□ -1.1
LINC-ROR-201ENST00000553704 CEBPZQ03701 1054 aaKnown RBP8.19□□□□□ -1.1
LINC-ROR-201ENST00000553704 MCMDC2Q4G0Z9 681 aa8.19□□□□□ -1.1
LINC-ROR-201ENST00000553704 TTLL7Q6ZT98 887 aa8.19□□□□□ -1.1
LINC-ROR-201ENST00000553704 KBTBD3Q8NAB2 608 aa8.19□□□□□ -1.1
LINC-ROR-201ENST00000553704 BICD2Q8TD16 824 aa8.19□□□□□ -1.1
LINC-ROR-201ENST00000553704 SCAND2PQ9GZW5 306 aaPredicted RBP8.19□□□□□ -1.1
LINC-ROR-201ENST00000553704 U3KPZ7 1027 aaPredicted RBP8.19□□□□□ -1.1
LINC-ROR-201ENST00000553704 SH3TC1Q8TE82 1336 aa8.19□□□□□ -1.1
LINC-ROR-201ENST00000553704 SHANK3Q9BYB0 1731 aa8.19□□□□□ -1.1
LINC-ROR-201ENST00000553704 KCPQ6ZWJ8 1503 aa8.19□□□□□ -1.1
LINC-ROR-201ENST00000553704 APOBRQ0VD83 1088 aa8.19□□□□□ -1.1
LINC-ROR-201ENST00000553704 LRMPQ12912 555 aa8.19□□□□□ -1.1
LINC-ROR-201ENST00000553704 KRT32Q14532 448 aa8.19□□□□□ -1.1
LINC-ROR-201ENST00000553704 NSUN7Q8NE18 718 aaKnown RBP8.19□□□□□ -1.1
LINC-ROR-201ENST00000553704 SMARCC2Q8TAQ2 1214 aa8.19□□□□□ -1.1
LINC-ROR-201ENST00000553704 ZNF594Q96JF6 807 aaPredicted RBP8.19□□□□□ -1.1
LINC-ROR-201ENST00000553704 DCAF5Q96JK2 942 aa8.19□□□□□ -1.1
LINC-ROR-201ENST00000553704 DNAJC25Q9H1X3 360 aa8.19□□□□□ -1.1
LINC-ROR-201ENST00000553704 NCOA5Q9HCD5 579 aaKnown RBP8.19□□□□□ -1.1
LINC-ROR-201ENST00000553704 NRBP1Q9UHY1 535 aa8.19□□□□□ -1.1
LINC-ROR-201ENST00000553704 ADD1P35611 737 aaKnown RBP8.18□□□□□ -1.1
LINC-ROR-201ENST00000553704 TIMM10P62072 90 aa8.18□□□□□ -1.1
LINC-ROR-201ENST00000553704 LRRC24Q50LG9 513 aa8.18□□□□□ -1.1
LINC-ROR-201ENST00000553704 CHST3Q7LGC8 479 aa8.18□□□□□ -1.1
LINC-ROR-201ENST00000553704 PLBD2Q8NHP8 589 aa8.18□□□□□ -1.1
LINC-ROR-201ENST00000553704 GOLPH3LQ9H4A5 285 aa8.18□□□□□ -1.1
LINC-ROR-201ENST00000553704 MAST3O60307 1309 aa8.18□□□□□ -1.1
LINC-ROR-201ENST00000553704 PTPDC1A2A3K4 754 aa8.18□□□□□ -1.1
LINC-ROR-201ENST00000553704 GOLGA6L4A6NEF3 574 aa8.18□□□□□ -1.1
LINC-ROR-201ENST00000553704 CCT2P78371 535 aaKnown RBP8.18□□□□□ -1.1
LINC-ROR-201ENST00000553704 NEUROD6Q96NK8 337 aa8.18□□□□□ -1.1
LINC-ROR-201ENST00000553704 DDX19AQ9NUU7 478 aaKnown RBP8.18□□□□□ -1.1
LINC-ROR-201ENST00000553704 PAG1Q9NWQ8 432 aa8.18□□□□□ -1.1
LINC-ROR-201ENST00000553704 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.18□□□□□ -1.1
LINC-ROR-201ENST00000553704 TNS3Q68CZ2 1445 aa8.18□□□□□ -1.1
LINC-ROR-201ENST00000553704 H3BQV1 296 aa8.17□□□□□ -1.1
LINC-ROR-201ENST00000553704 M0R2C6 588 aa8.17□□□□□ -1.1
LINC-ROR-201ENST00000553704 PFKFB2O60825 505 aa8.17□□□□□ -1.1
LINC-ROR-201ENST00000553704 CABP4P57796 275 aa8.17□□□□□ -1.1
LINC-ROR-201ENST00000553704 IFFO2Q5TF58 517 aa8.17□□□□□ -1.1
LINC-ROR-201ENST00000553704 TTLL5Q6EMB2 1281 aa8.17□□□□□ -1.1
LINC-ROR-201ENST00000553704 C11orf57Q6ZUT1 292 aaPredicted RBP8.17□□□□□ -1.1
LINC-ROR-201ENST00000553704 ILDR1Q86SU0 546 aaPredicted RBP8.17□□□□□ -1.1
LINC-ROR-201ENST00000553704 PLA2G4DQ86XP0 818 aa8.17□□□□□ -1.1
LINC-ROR-201ENST00000553704 TDRD7Q8NHU6 1098 aaKnown RBP8.17□□□□□ -1.1
LINC-ROR-201ENST00000553704 PRIMPOLQ96LW4 560 aa8.17□□□□□ -1.1
LINC-ROR-201ENST00000553704 ZMYND15Q9H091 742 aa8.17□□□□□ -1.1
LINC-ROR-201ENST00000553704 ZBTB3Q9H5J0 574 aa8.17□□□□□ -1.1
LINC-ROR-201ENST00000553704 GPHNQ9NQX3 736 aaPredicted RBP8.17□□□□□ -1.1
LINC-ROR-201ENST00000553704 TOGARAM1Q9Y4F4 1720 aa8.17□□□□□ -1.1
LINC-ROR-201ENST00000553704 SPEF2Q9C093 1822 aa8.17□□□□□ -1.1
LINC-ROR-201ENST00000553704 SALL1Q9NSC2 1324 aa8.17□□□□□ -1.1
LINC-ROR-201ENST00000553704 H7C1W4 665 aa8.17□□□□□ -1.1
LINC-ROR-201ENST00000553704 GTF2F1P35269 517 aaKnown RBP eCLIP8.17□□□□□ -1.1
LINC-ROR-201ENST00000553704 ZNF75DP51815 510 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms