RNA–Protein interactions for RNA: ENST00000553615.5

FCF1-203, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 3 BASIC

Gene FCF1, Length 954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-203ENST00000553615 USP17L21D6R901 530 aa8.41□□□□□ -1.06
FCF1-203ENST00000553615 USP17L18D6R9N7 530 aa8.41□□□□□ -1.06
FCF1-203ENST00000553615 USP17L22D6RA61 530 aa8.41□□□□□ -1.06
FCF1-203ENST00000553615 USP17L17D6RBQ6 530 aa8.41□□□□□ -1.06
FCF1-203ENST00000553615 USP17L19D6RCP7 530 aa8.41□□□□□ -1.06
FCF1-203ENST00000553615 USP17L20D6RJB6 530 aa8.41□□□□□ -1.06
FCF1-203ENST00000553615 LIG1P18858 919 aa8.41□□□□□ -1.06
FCF1-203ENST00000553615 TDO2P48775 406 aa8.41□□□□□ -1.06
FCF1-203ENST00000553615 USP17L24Q0WX57 530 aa8.41□□□□□ -1.06
FCF1-203ENST00000553615 PTK7Q13308 1070 aa8.41□□□□□ -1.06
FCF1-203ENST00000553615 TLR1Q15399 786 aa8.41□□□□□ -1.06
FCF1-203ENST00000553615 ZSCAN23Q3MJ62 389 aa8.41□□□□□ -1.06
FCF1-203ENST00000553615 CRTC2Q53ET0 693 aaPredicted RBP8.41□□□□□ -1.06
FCF1-203ENST00000553615 TEX35Q5T0J7 233 aa8.41□□□□□ -1.06
FCF1-203ENST00000553615 CASC1Q6TDU7 716 aa8.41□□□□□ -1.06
FCF1-203ENST00000553615 LRSAM1Q6UWE0 723 aa8.41□□□□□ -1.06
FCF1-203ENST00000553615 ZNF397Q8NF99 534 aaPredicted RBP8.41□□□□□ -1.06
FCF1-203ENST00000553615 FAM210AQ96ND0 272 aa8.41□□□□□ -1.06
FCF1-203ENST00000553615 C22orf23Q9BZE7 217 aa8.41□□□□□ -1.06
FCF1-203ENST00000553615 DEF6Q9H4E7 631 aa8.41□□□□□ -1.06
FCF1-203ENST00000553615 ZNF358Q9NW07 568 aa8.41□□□□□ -1.06
FCF1-203ENST00000553615 SERTAD1Q9UHV2 236 aa8.41□□□□□ -1.06
FCF1-203ENST00000553615 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.41□□□□□ -1.06
FCF1-203ENST00000553615 SUPT6HQ7KZ85 1726 aaKnown RBP8.4□□□□□ -1.06
FCF1-203ENST00000553615 FHOD3Q2V2M9 1422 aa8.4□□□□□ -1.06
FCF1-203ENST00000553615 A0A1B0GUL7 405 aa8.4□□□□□ -1.06
FCF1-203ENST00000553615 PPP1R12AO14974 1030 aaPredicted RBP8.4□□□□□ -1.06
FCF1-203ENST00000553615 MBD3O95983 291 aa8.4□□□□□ -1.06
FCF1-203ENST00000553615 NUCB2P80303 420 aa8.4□□□□□ -1.06
FCF1-203ENST00000553615 PDE3AQ14432 1141 aa8.4□□□□□ -1.06
FCF1-203ENST00000553615 LYSMD3Q7Z3D4 306 aa8.4□□□□□ -1.06
FCF1-203ENST00000553615 SUGP1Q8IWZ8 645 aaKnown RBP8.4□□□□□ -1.06
FCF1-203ENST00000553615 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.4□□□□□ -1.06
FCF1-203ENST00000553615 KIF18AQ8NI77 898 aa8.4□□□□□ -1.06
FCF1-203ENST00000553615 ZSCAN10Q96SZ4 725 aaPredicted RBP8.4□□□□□ -1.06
FCF1-203ENST00000553615 HRH3Q9Y5N1 445 aa8.4□□□□□ -1.06
FCF1-203ENST00000553615 ABCC2Q92887 1545 aa8.39□□□□□ -1.07
FCF1-203ENST00000553615 ZNF608Q9ULD9 1512 aaPredicted RBP8.39□□□□□ -1.07
FCF1-203ENST00000553615 RALGAPBQ86X10 1494 aa8.39□□□□□ -1.07
FCF1-203ENST00000553615 SOBPA7XYQ1 873 aa8.39□□□□□ -1.07
FCF1-203ENST00000553615 SMTNL1A8MU46 457 aa8.39□□□□□ -1.07
FCF1-203ENST00000553615 NEFHP12036 1026 aa8.39□□□□□ -1.07
FCF1-203ENST00000553615 SMTNP53814 917 aa8.39□□□□□ -1.07
FCF1-203ENST00000553615 SEC13P55735 322 aa8.39□□□□□ -1.07
FCF1-203ENST00000553615 SRPK2P78362 688 aaKnown RBP8.39□□□□□ -1.07
FCF1-203ENST00000553615 GPS2Q13227 327 aa8.39□□□□□ -1.07
FCF1-203ENST00000553615 FAM50AQ14320 339 aaKnown RBP8.39□□□□□ -1.07
FCF1-203ENST00000553615 TMEM214Q6NUQ4 689 aaKnown RBP8.39□□□□□ -1.07
FCF1-203ENST00000553615 ANKMY2Q8IV38 441 aa8.39□□□□□ -1.07
FCF1-203ENST00000553615 OTUD6BQ8N6M0 293 aa8.39□□□□□ -1.07
FCF1-203ENST00000553615 SYAP1Q96A49 352 aaPredicted RBP8.39□□□□□ -1.07
FCF1-203ENST00000553615 SLC4A9Q96Q91 983 aa8.39□□□□□ -1.07
FCF1-203ENST00000553615 GRIP2Q9C0E4 1043 aa8.39□□□□□ -1.07
FCF1-203ENST00000553615 V9GYY5 206 aaPredicted RBP8.39□□□□□ -1.07
FCF1-203ENST00000553615 SYNMO15061 1565 aa8.39□□□□□ -1.07
FCF1-203ENST00000553615 ARHGEF12Q9NZN5 1544 aa8.39□□□□□ -1.07
FCF1-203ENST00000553615 NKTRP30414 1462 aaKnown RBP8.38□□□□□ -1.07
FCF1-203ENST00000553615 ANKRD36BQ8N2N9 1353 aa8.38□□□□□ -1.07
FCF1-203ENST00000553615 CCDC196A0A1B0GTZ2 297 aa8.38□□□□□ -1.07
FCF1-203ENST00000553615 ATP2B1P20020 1258 aa8.38□□□□□ -1.07
FCF1-203ENST00000553615 GSCP56915 257 aaPredicted RBP8.38□□□□□ -1.07
FCF1-203ENST00000553615 NCBP1Q09161 790 aaKnown RBP8.38□□□□□ -1.07
FCF1-203ENST00000553615 FAM43BQ6ZT52 329 aaPredicted RBP8.38□□□□□ -1.07
FCF1-203ENST00000553615 PRICKLE2Q7Z3G6 844 aa8.38□□□□□ -1.07
FCF1-203ENST00000553615 JMYQ8N9B5 988 aa8.38□□□□□ -1.07
FCF1-203ENST00000553615 FHDC1Q9C0D6 1143 aaPredicted RBP8.38□□□□□ -1.07
FCF1-203ENST00000553615 RBSNQ9H1K0 784 aa8.38□□□□□ -1.07
FCF1-203ENST00000553615 FAM135AQ9P2D6 1515 aa8.38□□□□□ -1.07
FCF1-203ENST00000553615 LAMC1P11047 1609 aa8.37□□□□□ -1.07
FCF1-203ENST00000553615 A6NJY4 79 aa8.37□□□□□ -1.07
FCF1-203ENST00000553615 SFI1A8K8P3 1242 aa8.37□□□□□ -1.07
FCF1-203ENST00000553615 M0R2N6 131 aa8.37□□□□□ -1.07
FCF1-203ENST00000553615 MAFGO15525 162 aa8.37□□□□□ -1.07
FCF1-203ENST00000553615 HTATSF1O43719 755 aaKnown RBP8.37□□□□□ -1.07
FCF1-203ENST00000553615 ATG7O95352 703 aa8.37□□□□□ -1.07
FCF1-203ENST00000553615 TPM4P67936 248 aa8.37□□□□□ -1.07
FCF1-203ENST00000553615 DPYDQ12882 1025 aa8.37□□□□□ -1.07
FCF1-203ENST00000553615 GNASQ5JWF2 1037 aa8.37□□□□□ -1.07
FCF1-203ENST00000553615 SKAP1Q86WV1 359 aa8.37□□□□□ -1.07
FCF1-203ENST00000553615 FAM200AQ8TCP9 573 aa8.37□□□□□ -1.07
FCF1-203ENST00000553615 KIF1BPQ96EK5 621 aa8.37□□□□□ -1.07
FCF1-203ENST00000553615 CEP89Q96ST8 783 aa8.37□□□□□ -1.07
FCF1-203ENST00000553615 NOL10Q9BSC4 688 aaKnown RBP8.37□□□□□ -1.07
FCF1-203ENST00000553615 CXorf56Q9H5V9 222 aa8.37□□□□□ -1.07
FCF1-203ENST00000553615 NOVA2Q9UNW9 492 aaKnown RBP8.37□□□□□ -1.07
FCF1-203ENST00000553615 SH3BP1Q9Y3L3 701 aa8.37□□□□□ -1.07
FCF1-203ENST00000553615 JRKLQ9Y4A0 524 aa8.37□□□□□ -1.07
FCF1-203ENST00000553615 PAXBP1Q9Y5B6 917 aa8.37□□□□□ -1.07
FCF1-203ENST00000553615 DENND4BO75064 1496 aaPredicted RBP8.37□□□□□ -1.07
FCF1-203ENST00000553615 USP47Q96K76 1375 aa8.36□□□□□ -1.07
FCF1-203ENST00000553615 PLIN1O60240 522 aa8.36□□□□□ -1.07
FCF1-203ENST00000553615 DKK1O94907 266 aa8.36□□□□□ -1.07
FCF1-203ENST00000553615 BAG4O95429 457 aaKnown RBP8.36□□□□□ -1.07
FCF1-203ENST00000553615 HNRNPH2P55795 449 aaKnown RBP8.36□□□□□ -1.07
FCF1-203ENST00000553615 ELOAQ14241 798 aaKnown RBP8.36□□□□□ -1.07
FCF1-203ENST00000553615 TTC31Q49AM3 519 aaPredicted RBP8.36□□□□□ -1.07
FCF1-203ENST00000553615 C20orf194Q5TEA3 1177 aa8.36□□□□□ -1.07
FCF1-203ENST00000553615 NBPF15Q8N660 670 aa8.36□□□□□ -1.07
FCF1-203ENST00000553615 GPATCH11Q8N954 259 aa8.36□□□□□ -1.07
FCF1-203ENST00000553615 IQUBQ8NA54 791 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms