RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 CNTN3Q9P232 1028 aa12.4□□□□□ -0.42
PCNX1-205ENST00000553508 SOX18P35713 384 aa12.39□□□□□ -0.43
PCNX1-205ENST00000553508 ECM1Q16610 540 aa12.39□□□□□ -0.43
PCNX1-205ENST00000553508 COL13A1Q5TAT6 717 aaPredicted RBP12.39□□□□□ -0.43
PCNX1-205ENST00000553508 NOP53Q9NZM5 478 aaKnown RBP12.39□□□□□ -0.43
PCNX1-205ENST00000553508 AFF1P51825 1210 aaKnown RBP12.38□□□□□ -0.43
PCNX1-205ENST00000553508 TRAPPC3LQ5T215 181 aa12.38□□□□□ -0.43
PCNX1-205ENST00000553508 KCTD17Q8N5Z5 321 aa12.38□□□□□ -0.43
PCNX1-205ENST00000553508 PRDM6Q9NQX0 595 aa12.38□□□□□ -0.43
PCNX1-205ENST00000553508 KANSL3Q9P2N6 904 aa12.38□□□□□ -0.43
PCNX1-205ENST00000553508 FAM229AH3BQW9 127 aa12.37□□□□□ -0.43
PCNX1-205ENST00000553508 NID1P14543 1247 aa12.37□□□□□ -0.43
PCNX1-205ENST00000553508 HYAL2Q12891 473 aa12.37□□□□□ -0.43
PCNX1-205ENST00000553508 C1orf127Q8N9H9 656 aa12.37□□□□□ -0.43
PCNX1-205ENST00000553508 PLD4Q96BZ4 506 aa12.37□□□□□ -0.43
PCNX1-205ENST00000553508 RBSNQ9H1K0 784 aa12.37□□□□□ -0.43
PCNX1-205ENST00000553508 BRPF3Q9ULD4 1205 aa12.37□□□□□ -0.43
PCNX1-205ENST00000553508 USP5P45974 858 aa12.36□□□□□ -0.43
PCNX1-205ENST00000553508 ARHGAP4P98171 946 aa12.36□□□□□ -0.43
PCNX1-205ENST00000553508 XKR5Q6UX68 686 aa12.36□□□□□ -0.43
PCNX1-205ENST00000553508 FRRS1LQ9P0K9 344 aa12.36□□□□□ -0.43
PCNX1-205ENST00000553508 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.36□□□□□ -0.43
PCNX1-205ENST00000553508 SPACA7Q96KW9 195 aa12.35□□□□□ -0.43
PCNX1-205ENST00000553508 CES1P23141 567 aa12.34□□□□□ -0.43
PCNX1-205ENST00000553508 GDF6Q6KF10 455 aaPredicted RBP12.34□□□□□ -0.43
PCNX1-205ENST00000553508 NCAPG2Q86XI2 1143 aa12.34□□□□□ -0.43
PCNX1-205ENST00000553508 DMRTC2Q8IXT2 367 aaPredicted RBP12.34□□□□□ -0.43
PCNX1-205ENST00000553508 TRAIPQ9BWF2 469 aa12.34□□□□□ -0.43
PCNX1-205ENST00000553508 BIN2Q9UBW5 565 aaPredicted RBP12.34□□□□□ -0.43
PCNX1-205ENST00000553508 GNEQ9Y223 722 aaKnown RBP12.34□□□□□ -0.43
PCNX1-205ENST00000553508 SOWAHDA6NJG2 315 aa12.33□□□□□ -0.44
PCNX1-205ENST00000553508 HOXD8P13378 290 aaPredicted RBP12.33□□□□□ -0.44
PCNX1-205ENST00000553508 FOXD3Q9UJU5 478 aaPredicted RBP12.33□□□□□ -0.44
PCNX1-205ENST00000553508 IVNS1ABPQ9Y6Y0 642 aa12.33□□□□□ -0.44
PCNX1-205ENST00000553508 KRBA1A5PL33 1030 aa12.32□□□□□ -0.44
PCNX1-205ENST00000553508 SPDYE3A6NKU9 549 aa12.32□□□□□ -0.44
PCNX1-205ENST00000553508 NDUFB5O43674 189 aa12.32□□□□□ -0.44
PCNX1-205ENST00000553508 ATP11AP98196 1134 aa12.32□□□□□ -0.44
PCNX1-205ENST00000553508 EHHADHQ08426 723 aa12.32□□□□□ -0.44
PCNX1-205ENST00000553508 TRIM28Q13263 835 aaKnown RBP12.32□□□□□ -0.44
PCNX1-205ENST00000553508 GRIK5Q16478 980 aa12.32□□□□□ -0.44
PCNX1-205ENST00000553508 GJD3Q8N144 294 aa12.32□□□□□ -0.44
PCNX1-205ENST00000553508 TNFRSF21O75509 655 aa12.31□□□□□ -0.44
PCNX1-205ENST00000553508 PRRT3Q5FWE3 981 aa12.31□□□□□ -0.44
PCNX1-205ENST00000553508 PHACTR2O75167 634 aa12.3□□□□□ -0.44
PCNX1-205ENST00000553508 CEP135Q66GS9 1140 aa12.3□□□□□ -0.44
PCNX1-205ENST00000553508 MSL1Q68DK7 614 aa12.3□□□□□ -0.44
PCNX1-205ENST00000553508 TMC1Q8TDI8 760 aa12.3□□□□□ -0.44
PCNX1-205ENST00000553508 CHRDQ9H2X0 955 aa12.3□□□□□ -0.44
PCNX1-205ENST00000553508 TRIM33Q9UPN9 1127 aa12.3□□□□□ -0.44
PCNX1-205ENST00000553508 PDIA4P13667 645 aaKnown RBP12.29□□□□□ -0.44
PCNX1-205ENST00000553508 PLA2G4EQ3MJ16 856 aa12.29□□□□□ -0.44
PCNX1-205ENST00000553508 WFDC8Q8IUA0 241 aa12.29□□□□□ -0.44
PCNX1-205ENST00000553508 TTC9Q92623 222 aa12.29□□□□□ -0.44
PCNX1-205ENST00000553508 RASSF4Q9H2L5 321 aa12.29□□□□□ -0.44
PCNX1-205ENST00000553508 EREGO14944 169 aa12.28□□□□□ -0.44
PCNX1-205ENST00000553508 KIF4AO95239 1232 aa12.28□□□□□ -0.44
PCNX1-205ENST00000553508 ACPPP15309 386 aa12.28□□□□□ -0.44
PCNX1-205ENST00000553508 KCNA1Q09470 495 aa12.28□□□□□ -0.44
PCNX1-205ENST00000553508 GPAT2Q6NUI2 795 aa12.28□□□□□ -0.44
PCNX1-205ENST00000553508 ALYREFQ86V81 257 aaKnown RBP12.28□□□□□ -0.44
PCNX1-205ENST00000553508 SNX29Q8TEQ0 813 aa12.28□□□□□ -0.44
PCNX1-205ENST00000553508 A0A0A0MRY4 1105 aa12.27□□□□□ -0.45
PCNX1-205ENST00000553508 TRPA1O75762 1119 aa12.27□□□□□ -0.45
PCNX1-205ENST00000553508 SPATA31C1P0DKV0 1188 aa12.27□□□□□ -0.45
PCNX1-205ENST00000553508 GRIK4Q16099 956 aa12.27□□□□□ -0.45
PCNX1-205ENST00000553508 AEBP1Q8IUX7 1158 aa12.27□□□□□ -0.45
PCNX1-205ENST00000553508 IL22RA1Q8N6P7 574 aa12.27□□□□□ -0.45
PCNX1-205ENST00000553508 CEP120Q8N960 986 aa12.27□□□□□ -0.45
PCNX1-205ENST00000553508 LACRTQ9GZZ8 138 aa12.27□□□□□ -0.45
PCNX1-205ENST00000553508 SALL4Q9UJQ4 1053 aa12.27□□□□□ -0.45
PCNX1-205ENST00000553508 PMEPA1Q969W9 287 aa12.26□□□□□ -0.45
PCNX1-205ENST00000553508 SMNDC1O75940 238 aaKnown RBP eCLIP12.25□□□□□ -0.45
PCNX1-205ENST00000553508 RAC1P63000 192 aa12.25□□□□□ -0.45
PCNX1-205ENST00000553508 POLR3DP05423 398 aaPredicted RBP12.24□□□□□ -0.45
PCNX1-205ENST00000553508 PBX4Q9BYU1 374 aa12.24□□□□□ -0.45
PCNX1-205ENST00000553508 C1QTNF9BB2RNN3 333 aa12.23□□□□□ -0.45
PCNX1-205ENST00000553508 ITGB2P05107 769 aa12.23□□□□□ -0.45
PCNX1-205ENST00000553508 CDC25BP30305 580 aa12.23□□□□□ -0.45
PCNX1-205ENST00000553508 CHRNA4P43681 627 aa12.23□□□□□ -0.45
PCNX1-205ENST00000553508 BAG6P46379 1132 aa12.23□□□□□ -0.45
PCNX1-205ENST00000553508 PDE3BQ13370 1112 aa12.23□□□□□ -0.45
PCNX1-205ENST00000553508 ZFYVE28Q9HCC9 887 aa12.23□□□□□ -0.45
PCNX1-205ENST00000553508 APBA3O96018 575 aa12.22□□□□□ -0.45
PCNX1-205ENST00000553508 CD163Q86VB7 1156 aa12.22□□□□□ -0.45
PCNX1-205ENST00000553508 NIF3L1Q9GZT8 377 aa12.22□□□□□ -0.45
PCNX1-205ENST00000553508 AMOTL2Q9Y2J4 779 aa12.22□□□□□ -0.45
PCNX1-205ENST00000553508 ADAMTSL4Q6UY14 1074 aa12.21□□□□□ -0.45
PCNX1-205ENST00000553508 FMR1NBQ8N0W7 255 aaPredicted RBP12.21□□□□□ -0.45
PCNX1-205ENST00000553508 HHIPQ96QV1 700 aa12.21□□□□□ -0.45
PCNX1-205ENST00000553508 FAM129BQ96TA1 746 aa12.21□□□□□ -0.45
PCNX1-205ENST00000553508 POP1Q99575 1024 aaKnown RBP12.21□□□□□ -0.45
PCNX1-205ENST00000553508 MAPK1P28482 360 aa12.2□□□□□ -0.46
PCNX1-205ENST00000553508 ORC1Q13415 861 aa12.2□□□□□ -0.46
PCNX1-205ENST00000553508 CITED4Q96RK1 184 aa12.2□□□□□ -0.46
PCNX1-205ENST00000553508 OSMRQ99650 979 aa12.2□□□□□ -0.46
PCNX1-205ENST00000553508 LATS2Q9NRM7 1088 aa12.2□□□□□ -0.46
PCNX1-205ENST00000553508 DZANK1Q9NVP4 752 aa12.2□□□□□ -0.46
PCNX1-205ENST00000553508 USPL1Q5W0Q7 1092 aa12.19□□□□□ -0.46
PCNX1-205ENST00000553508 TXNDC11Q6PKC3 985 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms