RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 POLIQ9UNA4 740 aa9.04□□□□□ -0.96
ATXN3-217ENST00000553287 ICMTO60725 284 aa9.03□□□□□ -0.96
ATXN3-217ENST00000553287 GHRHP01286 108 aa9.03□□□□□ -0.96
ATXN3-217ENST00000553287 PRRT3Q5FWE3 981 aa9.03□□□□□ -0.96
ATXN3-217ENST00000553287 DMRTC2Q8IXT2 367 aaPredicted RBP9.03□□□□□ -0.96
ATXN3-217ENST00000553287 TTC9Q92623 222 aa9.03□□□□□ -0.96
ATXN3-217ENST00000553287 TMEM63CQ9P1W3 806 aa9.03□□□□□ -0.96
ATXN3-217ENST00000553287 EGFL7Q9UHF1 273 aa9.03□□□□□ -0.96
ATXN3-217ENST00000553287 FAM229AH3BQW9 127 aa9.02□□□□□ -0.97
ATXN3-217ENST00000553287 HOXD8P13378 290 aaPredicted RBP9.02□□□□□ -0.97
ATXN3-217ENST00000553287 HYAL2Q12891 473 aa9.02□□□□□ -0.97
ATXN3-217ENST00000553287 XKR5Q6UX68 686 aa9.02□□□□□ -0.97
ATXN3-217ENST00000553287 TXNDC2Q86VQ3 553 aa9.02□□□□□ -0.97
ATXN3-217ENST00000553287 PLD4Q96BZ4 506 aa9.02□□□□□ -0.97
ATXN3-217ENST00000553287 RBSNQ9H1K0 784 aa9.02□□□□□ -0.97
ATXN3-217ENST00000553287 CNTN3Q9P232 1028 aa9.02□□□□□ -0.97
ATXN3-217ENST00000553287 A6NHS1 94 aa9.01□□□□□ -0.97
ATXN3-217ENST00000553287 FZD6O60353 706 aa9.01□□□□□ -0.97
ATXN3-217ENST00000553287 IGHA1P01876 353 aa9.01□□□□□ -0.97
ATXN3-217ENST00000553287 ITGB2P05107 769 aa9.01□□□□□ -0.97
ATXN3-217ENST00000553287 CYP2E1P05181 493 aaPredicted RBP9.01□□□□□ -0.97
ATXN3-217ENST00000553287 SPATA31C1P0DKV0 1188 aa9.01□□□□□ -0.97
ATXN3-217ENST00000553287 GRIK5Q16478 980 aa9.01□□□□□ -0.97
ATXN3-217ENST00000553287 COL13A1Q5TAT6 717 aaPredicted RBP9.01□□□□□ -0.97
ATXN3-217ENST00000553287 CCDC87Q9NVE4 849 aa9.01□□□□□ -0.97
ATXN3-217ENST00000553287 MSL1Q68DK7 614 aa9□□□□□ -0.97
ATXN3-217ENST00000553287 GLYCTKQ8IVS8 523 aa9□□□□□ -0.97
ATXN3-217ENST00000553287 SPACA7Q96KW9 195 aa9□□□□□ -0.97
ATXN3-217ENST00000553287 C1QTNF9BB2RNN3 333 aa8.99□□□□□ -0.97
ATXN3-217ENST00000553287 H3BRB1 525 aa8.99□□□□□ -0.97
ATXN3-217ENST00000553287 USP5P45974 858 aa8.99□□□□□ -0.97
ATXN3-217ENST00000553287 ILDR2Q71H61 639 aa8.99□□□□□ -0.97
ATXN3-217ENST00000553287 CCER1Q8TC90 406 aaPredicted RBP8.99□□□□□ -0.97
ATXN3-217ENST00000553287 TUT1Q9H6E5 874 aaKnown RBP8.99□□□□□ -0.97
ATXN3-217ENST00000553287 A0A0A0MRY4 1105 aa8.98□□□□□ -0.97
ATXN3-217ENST00000553287 MSTNO14793 375 aa8.98□□□□□ -0.97
ATXN3-217ENST00000553287 RAC1P63000 192 aa8.98□□□□□ -0.97
ATXN3-217ENST00000553287 ECM1Q16610 540 aa8.98□□□□□ -0.97
ATXN3-217ENST00000553287 GDF6Q6KF10 455 aaPredicted RBP8.98□□□□□ -0.97
ATXN3-217ENST00000553287 CD163Q86VB7 1156 aa8.98□□□□□ -0.97
ATXN3-217ENST00000553287 NCAPG2Q86XI2 1143 aa8.98□□□□□ -0.97
ATXN3-217ENST00000553287 WFDC8Q8IUA0 241 aa8.98□□□□□ -0.97
ATXN3-217ENST00000553287 C1orf127Q8N9H9 656 aa8.98□□□□□ -0.97
ATXN3-217ENST00000553287 CES1P23141 567 aa8.97□□□□□ -0.97
ATXN3-217ENST00000553287 GRIK4Q16099 956 aa8.97□□□□□ -0.97
ATXN3-217ENST00000553287 SPOCK3Q9BQ16 436 aa8.97□□□□□ -0.97
ATXN3-217ENST00000553287 BRD1O95696 1058 aa8.96□□□□□ -0.98
ATXN3-217ENST00000553287 APBA3O96018 575 aa8.96□□□□□ -0.98
ATXN3-217ENST00000553287 CHRNA4P43681 627 aa8.96□□□□□ -0.98
ATXN3-217ENST00000553287 EHHADHQ08426 723 aa8.96□□□□□ -0.98
ATXN3-217ENST00000553287 PMEPA1Q969W9 287 aa8.96□□□□□ -0.98
ATXN3-217ENST00000553287 KANSL3Q9P2N6 904 aa8.96□□□□□ -0.98
ATXN3-217ENST00000553287 BRPF3Q9ULD4 1205 aa8.96□□□□□ -0.98
ATXN3-217ENST00000553287 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.96□□□□□ -0.98
ATXN3-217ENST00000553287 KIF4AO95239 1232 aa8.95□□□□□ -0.98
ATXN3-217ENST00000553287 CEP135Q66GS9 1140 aa8.95□□□□□ -0.98
ATXN3-217ENST00000553287 IL22RA1Q8N6P7 574 aa8.95□□□□□ -0.98
ATXN3-217ENST00000553287 CEP120Q8N960 986 aa8.95□□□□□ -0.98
ATXN3-217ENST00000553287 SALL4Q9UJQ4 1053 aa8.95□□□□□ -0.98
ATXN3-217ENST00000553287 TRIM33Q9UPN9 1127 aa8.95□□□□□ -0.98
ATXN3-217ENST00000553287 TNFRSF21O75509 655 aa8.94□□□□□ -0.98
ATXN3-217ENST00000553287 BAG6P46379 1132 aa8.94□□□□□ -0.98
ATXN3-217ENST00000553287 ARHGAP4P98171 946 aa8.94□□□□□ -0.98
ATXN3-217ENST00000553287 ATP11AP98196 1134 aa8.94□□□□□ -0.98
ATXN3-217ENST00000553287 GJD3Q8N144 294 aa8.94□□□□□ -0.98
ATXN3-217ENST00000553287 RASSF4Q9H2L5 321 aa8.94□□□□□ -0.98
ATXN3-217ENST00000553287 PHACTR2O75167 634 aa8.93□□□□□ -0.98
ATXN3-217ENST00000553287 SMNDC1O75940 238 aaKnown RBP eCLIP8.93□□□□□ -0.98
ATXN3-217ENST00000553287 ELNP15502 786 aa8.93□□□□□ -0.98
ATXN3-217ENST00000553287 FMR1NBQ8N0W7 255 aaPredicted RBP8.93□□□□□ -0.98
ATXN3-217ENST00000553287 DTWD1Q8N5C7 304 aa8.93□□□□□ -0.98
ATXN3-217ENST00000553287 NACC1Q96RE7 527 aa8.93□□□□□ -0.98
ATXN3-217ENST00000553287 PBX4Q9BYU1 374 aa8.93□□□□□ -0.98
ATXN3-217ENST00000553287 CHRDQ9H2X0 955 aa8.93□□□□□ -0.98
ATXN3-217ENST00000553287 PROCP04070 461 aa8.92□□□□□ -0.98
ATXN3-217ENST00000553287 FBXO11Q86XK2 927 aa8.92□□□□□ -0.98
ATXN3-217ENST00000553287 CACTIN-AS1Q8N1I8 211 aa8.92□□□□□ -0.98
ATXN3-217ENST00000553287 FOXD3Q9UJU5 478 aaPredicted RBP8.92□□□□□ -0.98
ATXN3-217ENST00000553287 C9orf172C9J069 976 aa8.91□□□□□ -0.98
ATXN3-217ENST00000553287 SELPP16109 830 aa8.91□□□□□ -0.98
ATXN3-217ENST00000553287 POP1Q99575 1024 aaKnown RBP8.91□□□□□ -0.98
ATXN3-217ENST00000553287 LACRTQ9GZZ8 138 aa8.91□□□□□ -0.98
ATXN3-217ENST00000553287 EREGO14944 169 aa8.9□□□□□ -0.98
ATXN3-217ENST00000553287 NDUFB5O43674 189 aa8.9□□□□□ -0.98
ATXN3-217ENST00000553287 GATA4P43694 442 aa8.9□□□□□ -0.98
ATXN3-217ENST00000553287 SHISA2Q6UWI4 295 aa8.9□□□□□ -0.98
ATXN3-217ENST00000553287 SNX29Q8TEQ0 813 aa8.9□□□□□ -0.98
ATXN3-217ENST00000553287 ZFYVE28Q9HCC9 887 aa8.9□□□□□ -0.98
ATXN3-217ENST00000553287 GNEQ9Y223 722 aaKnown RBP8.9□□□□□ -0.98
ATXN3-217ENST00000553287 PPME1Q9Y570 386 aa8.9□□□□□ -0.98
ATXN3-217ENST00000553287 SOWAHDA6NJG2 315 aa8.89□□□□□ -0.99
ATXN3-217ENST00000553287 DEAF1O75398 565 aaPredicted RBP8.89□□□□□ -0.99
ATXN3-217ENST00000553287 TRPA1O75762 1119 aa8.89□□□□□ -0.99
ATXN3-217ENST00000553287 LENG1Q96BZ8 264 aaPredicted RBP8.89□□□□□ -0.99
ATXN3-217ENST00000553287 MUC3BQ9H195 1237 aa8.89□□□□□ -0.99
ATXN3-217ENST00000553287 DZANK1Q9NVP4 752 aa8.89□□□□□ -0.99
ATXN3-217ENST00000553287 ACPPP15309 386 aa8.88□□□□□ -0.99
ATXN3-217ENST00000553287 CDC27P30260 824 aa8.88□□□□□ -0.99
ATXN3-217ENST00000553287 PDE3BQ13370 1112 aa8.88□□□□□ -0.99
ATXN3-217ENST00000553287 TMC1Q8TDI8 760 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms