RNA–Protein interactions for RNA: ENST00000553192.5

SNRPF-205, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 4 BASIC

Gene SNRPF, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-205ENST00000553192 RSPH6AQ9H0K4 717 aa15.76■□□□□ 0.11
SNRPF-205ENST00000553192 NSFL1CQ9UNZ2 370 aaKnown RBP15.76■□□□□ 0.11
SNRPF-205ENST00000553192 LRRC37AA6NMS7 1700 aa15.76■□□□□ 0.11
SNRPF-205ENST00000553192 LAMB4A4D0S4 1761 aa15.75■□□□□ 0.11
SNRPF-205ENST00000553192 PITPNM2Q9BZ72 1349 aa15.75■□□□□ 0.11
SNRPF-205ENST00000553192 GPSM2P81274 684 aa15.74■□□□□ 0.11
SNRPF-205ENST00000553192 PTPN12Q05209 780 aaKnown RBP15.74■□□□□ 0.11
SNRPF-205ENST00000553192 LRP10Q7Z4F1 713 aa15.74■□□□□ 0.11
SNRPF-205ENST00000553192 ZNF609O15014 1411 aa15.74■□□□□ 0.11
SNRPF-205ENST00000553192 LAMB2P55268 1798 aa15.74■□□□□ 0.11
SNRPF-205ENST00000553192 TAF1P21675 1872 aa15.74■□□□□ 0.11
SNRPF-205ENST00000553192 SCN9AQ15858 1988 aa15.73■□□□□ 0.11
SNRPF-205ENST00000553192 C6orf229H3BNL8 230 aa15.73■□□□□ 0.11
SNRPF-205ENST00000553192 TAF7Q15545 349 aaPredicted RBP15.73■□□□□ 0.11
SNRPF-205ENST00000553192 SPRYD7Q5W111 196 aa15.73■□□□□ 0.11
SNRPF-205ENST00000553192 TMC4Q7Z404 712 aa15.73■□□□□ 0.11
SNRPF-205ENST00000553192 CD99L2Q8TCZ2 262 aa15.73■□□□□ 0.11
SNRPF-205ENST00000553192 RTF1Q92541 710 aaKnown RBP15.73■□□□□ 0.11
SNRPF-205ENST00000553192 ZNF333Q96JL9 665 aa15.73■□□□□ 0.11
SNRPF-205ENST00000553192 GMLQ99445 158 aa15.73■□□□□ 0.11
SNRPF-205ENST00000553192 PRO3102Q9H379 93 aa15.73■□□□□ 0.11
SNRPF-205ENST00000553192 COL4A1P02462 1669 aa15.73■□□□□ 0.11
SNRPF-205ENST00000553192 ANKRD36CQ5JPF3 1778 aa15.72■□□□□ 0.11
SNRPF-205ENST00000553192 ALDH1A1P00352 501 aa15.72■□□□□ 0.11
SNRPF-205ENST00000553192 HSPA5P11021 654 aaKnown RBP15.72■□□□□ 0.11
SNRPF-205ENST00000553192 MNX1P50219 401 aaPredicted RBP15.72■□□□□ 0.11
SNRPF-205ENST00000553192 TTLL12Q14166 644 aaPredicted RBP15.72■□□□□ 0.11
SNRPF-205ENST00000553192 CELF1Q92879 486 aaKnown RBP15.72■□□□□ 0.11
SNRPF-205ENST00000553192 MYOZ2Q9NPC6 264 aa15.72■□□□□ 0.11
SNRPF-205ENST00000553192 IGF2BP3O00425 579 aaKnown RBP eCLIP15.71■□□□□ 0.11
SNRPF-205ENST00000553192 RSBN1LQ6PCB5 846 aaPredicted RBP15.71■□□□□ 0.11
SNRPF-205ENST00000553192 IFNL1Q8IU54 200 aa15.71■□□□□ 0.11
SNRPF-205ENST00000553192 AGBL3Q8NEM8 1001 aa15.71■□□□□ 0.11
SNRPF-205ENST00000553192 TBC1D16Q8TBP0 767 aa15.71■□□□□ 0.11
SNRPF-205ENST00000553192 ERO1AQ96HE7 468 aa15.71■□□□□ 0.11
SNRPF-205ENST00000553192 TMEM106CQ9BVX2 250 aa15.71■□□□□ 0.11
SNRPF-205ENST00000553192 EIF4A1P60842 406 aaKnown RBP15.7■□□□□ 0.1
SNRPF-205ENST00000553192 CC2D1BQ5T0F9 858 aaKnown RBP15.7■□□□□ 0.1
SNRPF-205ENST00000553192 LDLRAD1Q5T700 205 aa15.7■□□□□ 0.1
SNRPF-205ENST00000553192 NLRP10Q86W26 655 aa15.7■□□□□ 0.1
SNRPF-205ENST00000553192 THUMPD2Q9BTF0 503 aaKnown RBP15.7■□□□□ 0.1
SNRPF-205ENST00000553192 PER1O15534 1290 aaPredicted RBP15.69■□□□□ 0.1
SNRPF-205ENST00000553192 PDIA6Q15084 440 aa15.69■□□□□ 0.1
SNRPF-205ENST00000553192 NBPF9Q3BBW0 867 aa15.69■□□□□ 0.1
SNRPF-205ENST00000553192 EYA3Q99504 573 aa15.69■□□□□ 0.1
SNRPF-205ENST00000553192 EFCC1Q9HA90 598 aa15.69■□□□□ 0.1
SNRPF-205ENST00000553192 USP17L8P0C7I0 530 aa15.68■□□□□ 0.1
SNRPF-205ENST00000553192 TCIRG1Q13488 830 aa15.68■□□□□ 0.1
SNRPF-205ENST00000553192 PRKG1Q13976 671 aa15.68■□□□□ 0.1
SNRPF-205ENST00000553192 NECTIN2Q92692 538 aa15.68■□□□□ 0.1
SNRPF-205ENST00000553192 SH3TC1Q8TE82 1336 aa15.68■□□□□ 0.1
SNRPF-205ENST00000553192 MANSC4A6NHS7 340 aaPredicted RBP15.67■□□□□ 0.1
SNRPF-205ENST00000553192 HTATSF1O43719 755 aaKnown RBP15.67■□□□□ 0.1
SNRPF-205ENST00000553192 EIF4G2P78344 907 aaKnown RBP eCLIP15.67■□□□□ 0.1
SNRPF-205ENST00000553192 FZD1Q9UP38 647 aa15.67■□□□□ 0.1
SNRPF-205ENST00000553192 ERBB4Q15303 1308 aa15.67■□□□□ 0.1
SNRPF-205ENST00000553192 DDX60Q8IY21 1712 aaKnown RBP15.66■□□□□ 0.1
SNRPF-205ENST00000553192 SOX1O00570 391 aaPredicted RBP15.66■□□□□ 0.1
SNRPF-205ENST00000553192 INHBEP58166 350 aa15.66■□□□□ 0.1
SNRPF-205ENST00000553192 CRHR2Q13324 411 aa15.66■□□□□ 0.1
SNRPF-205ENST00000553192 PROSER3Q2NL68 480 aa15.66■□□□□ 0.1
SNRPF-205ENST00000553192 ZNF428Q96B54 188 aa15.66■□□□□ 0.1
SNRPF-205ENST00000553192 ZC3H12CQ9C0D7 883 aaKnown RBP15.66■□□□□ 0.1
SNRPF-205ENST00000553192 TRMT112Q9UI30 125 aaKnown RBP15.66■□□□□ 0.1
SNRPF-205ENST00000553192 WTIPA6NIX2 430 aaPredicted RBP15.65■□□□□ 0.1
SNRPF-205ENST00000553192 ANXA1P04083 346 aa15.65■□□□□ 0.1
SNRPF-205ENST00000553192 SF3B3Q15393 1217 aaKnown RBP15.65■□□□□ 0.1
SNRPF-205ENST00000553192 SLC4A8Q2Y0W8 1093 aa15.65■□□□□ 0.1
SNRPF-205ENST00000553192 ARMC9Q7Z3E5 817 aa15.65■□□□□ 0.1
SNRPF-205ENST00000553192 PTCH2Q9Y6C5 1203 aa15.65■□□□□ 0.1
SNRPF-205ENST00000553192 LAMA3Q16787 3333 aa15.64■□□□□ 0.09
SNRPF-205ENST00000553192 MYCP01106 439 aaPredicted RBP15.64■□□□□ 0.09
SNRPF-205ENST00000553192 NF2P35240 595 aa15.64■□□□□ 0.09
SNRPF-205ENST00000553192 SP3Q02447 781 aa15.64■□□□□ 0.09
SNRPF-205ENST00000553192 LRCH3Q96II8 777 aa15.64■□□□□ 0.09
SNRPF-205ENST00000553192 PODXL2Q9NZ53 605 aa15.64■□□□□ 0.09
SNRPF-205ENST00000553192 ANGEL1Q9UNK9 670 aaKnown RBP15.64■□□□□ 0.09
SNRPF-205ENST00000553192 KDM3BQ7LBC6 1761 aa15.64■□□□□ 0.09
SNRPF-205ENST00000553192 WNT10BO00744 389 aa15.63■□□□□ 0.09
SNRPF-205ENST00000553192 SLC9C1Q4G0N8 1177 aa15.63■□□□□ 0.09
SNRPF-205ENST00000553192 PNISRQ8TF01 805 aaKnown RBP15.63■□□□□ 0.09
SNRPF-205ENST00000553192 DPF3Q92784 378 aa15.62■□□□□ 0.09
SNRPF-205ENST00000553192 SHISA4Q96DD7 197 aa15.62■□□□□ 0.09
SNRPF-205ENST00000553192 WNK4Q96J92 1243 aa15.62■□□□□ 0.09
SNRPF-205ENST00000553192 CLMNQ96JQ2 1002 aa15.62■□□□□ 0.09
SNRPF-205ENST00000553192 PTPN18Q99952 460 aa15.62■□□□□ 0.09
SNRPF-205ENST00000553192 COL25A1Q9BXS0 654 aaPredicted RBP15.62■□□□□ 0.09
SNRPF-205ENST00000553192 UFL1O94874 794 aa15.61■□□□□ 0.09
SNRPF-205ENST00000553192 ZBTB48P10074 688 aaPredicted RBP15.61■□□□□ 0.09
SNRPF-205ENST00000553192 HSP90AB3PQ58FF7 597 aa15.61■□□□□ 0.09
SNRPF-205ENST00000553192 NBPF11Q86T75 865 aa15.61■□□□□ 0.09
SNRPF-205ENST00000553192 SLC10A4Q96EP9 437 aa15.61■□□□□ 0.09
SNRPF-205ENST00000553192 MXD3Q9BW11 206 aa15.61■□□□□ 0.09
SNRPF-205ENST00000553192 USP17L3A6NCW0 530 aa15.6■□□□□ 0.09
SNRPF-205ENST00000553192 USP17L4A6NCW7 530 aa15.6■□□□□ 0.09
SNRPF-205ENST00000553192 G3V3G9 751 aa15.6■□□□□ 0.09
SNRPF-205ENST00000553192 GJA5P36382 358 aa15.6■□□□□ 0.09
SNRPF-205ENST00000553192 RPS8P62241 208 aaKnown RBP15.6■□□□□ 0.09
SNRPF-205ENST00000553192 MAP3K11Q16584 847 aa15.6■□□□□ 0.09
SNRPF-205ENST00000553192 DCAF8Q5TAQ9 597 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms