RNA–Protein interactions for RNA: ENST00000553058.5

PPFIA2-228, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 5

Gene PPFIA2, Length 917 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-228ENST00000553058 POTEEQ6S8J3 1075 aa11.12□□□□□ -0.63
PPFIA2-228ENST00000553058 HS2ST1Q7LGA3 356 aa11.12□□□□□ -0.63
PPFIA2-228ENST00000553058 ATCAYQ86WG3 371 aa11.12□□□□□ -0.63
PPFIA2-228ENST00000553058 SPSB2Q99619 263 aa11.12□□□□□ -0.63
PPFIA2-228ENST00000553058 C19orf44Q9H6X5 657 aa11.12□□□□□ -0.63
PPFIA2-228ENST00000553058 POLIQ9UNA4 740 aa11.12□□□□□ -0.63
PPFIA2-228ENST00000553058 COL16A1Q07092 1604 aaPredicted RBP11.12□□□□□ -0.63
PPFIA2-228ENST00000553058 ATF4P18848 351 aaPredicted RBP11.11□□□□□ -0.63
PPFIA2-228ENST00000553058 SCTRP47872 440 aa11.11□□□□□ -0.63
PPFIA2-228ENST00000553058 SCNN1DP51172 638 aa11.11□□□□□ -0.63
PPFIA2-228ENST00000553058 C4orf48Q5BLP8 95 aa11.11□□□□□ -0.63
PPFIA2-228ENST00000553058 CC2D2BQ6DHV5 1058 aa11.11□□□□□ -0.63
PPFIA2-228ENST00000553058 FOXJ1Q92949 421 aa11.11□□□□□ -0.63
PPFIA2-228ENST00000553058 CSRNP1Q96S65 589 aa11.11□□□□□ -0.63
PPFIA2-228ENST00000553058 GGT7Q9UJ14 662 aa11.11□□□□□ -0.63
PPFIA2-228ENST00000553058 RIPOR2Q9Y4F9 1068 aa11.11□□□□□ -0.63
PPFIA2-228ENST00000553058 JCADQ9P266 1359 aa11.11□□□□□ -0.63
PPFIA2-228ENST00000553058 TRPM2O94759 1503 aa11.1□□□□□ -0.63
PPFIA2-228ENST00000553058 LRP6O75581 1613 aa11.1□□□□□ -0.63
PPFIA2-228ENST00000553058 XRN1Q8IZH2 1706 aaKnown RBP11.1□□□□□ -0.63
PPFIA2-228ENST00000553058 BHMG1C9JSJ3 638 aaPredicted RBP11.1□□□□□ -0.63
PPFIA2-228ENST00000553058 K7ELQ4 463 aaPredicted RBP11.1□□□□□ -0.63
PPFIA2-228ENST00000553058 GDF10P55107 478 aa11.1□□□□□ -0.63
PPFIA2-228ENST00000553058 CCDC24Q8N4L8 307 aa11.1□□□□□ -0.63
PPFIA2-228ENST00000553058 COL4A3BPQ9Y5P4 624 aa11.1□□□□□ -0.63
PPFIA2-228ENST00000553058 NEXMIFQ5QGS0 1516 aa11.09□□□□□ -0.63
PPFIA2-228ENST00000553058 CLTCL1P53675 1640 aa11.09□□□□□ -0.63
PPFIA2-228ENST00000553058 AHDC1Q5TGY3 1603 aaPredicted RBP11.09□□□□□ -0.63
PPFIA2-228ENST00000553058 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.09□□□□□ -0.63
PPFIA2-228ENST00000553058 WASLO00401 505 aaPredicted RBP11.09□□□□□ -0.63
PPFIA2-228ENST00000553058 STAU1O95793 577 aaKnown RBP11.09□□□□□ -0.63
PPFIA2-228ENST00000553058 EIF4BP23588 611 aaKnown RBP11.09□□□□□ -0.63
PPFIA2-228ENST00000553058 MZF1P28698 734 aaPredicted RBP11.09□□□□□ -0.63
PPFIA2-228ENST00000553058 FAM26DQ5JW98 314 aa11.09□□□□□ -0.63
PPFIA2-228ENST00000553058 BRINP3Q76B58 766 aa11.09□□□□□ -0.63
PPFIA2-228ENST00000553058 BAP1Q92560 729 aa11.09□□□□□ -0.63
PPFIA2-228ENST00000553058 AXIN2Q9Y2T1 843 aa11.09□□□□□ -0.63
PPFIA2-228ENST00000553058 LOC102724159A0A0B4J2E5 919 aa11.08□□□□□ -0.64
PPFIA2-228ENST00000553058 PARNO95453 639 aaKnown RBP11.08□□□□□ -0.64
PPFIA2-228ENST00000553058 USP5P45974 858 aa11.08□□□□□ -0.64
PPFIA2-228ENST00000553058 RAB15P59190 212 aa11.08□□□□□ -0.64
PPFIA2-228ENST00000553058 PWP2Q15269 919 aaKnown RBP11.08□□□□□ -0.64
PPFIA2-228ENST00000553058 CKAP2LQ8IYA6 745 aa11.08□□□□□ -0.64
PPFIA2-228ENST00000553058 C2orf49Q9BVC5 232 aaPredicted RBP11.08□□□□□ -0.64
PPFIA2-228ENST00000553058 C1QTNF2Q9BXJ5 285 aa11.08□□□□□ -0.64
PPFIA2-228ENST00000553058 QTRT2Q9H974 415 aaKnown RBP11.08□□□□□ -0.64
PPFIA2-228ENST00000553058 SERTAD1Q9UHV2 236 aa11.08□□□□□ -0.64
PPFIA2-228ENST00000553058 LRFN2Q9ULH4 789 aa11.08□□□□□ -0.64
PPFIA2-228ENST00000553058 SPG7Q9UQ90 795 aa11.08□□□□□ -0.64
PPFIA2-228ENST00000553058 SPHKAPQ2M3C7 1700 aa11.08□□□□□ -0.64
PPFIA2-228ENST00000553058 HFM1A2PYH4 1435 aa11.08□□□□□ -0.64
PPFIA2-228ENST00000553058 DCCP43146 1447 aa11.08□□□□□ -0.64
PPFIA2-228ENST00000553058 MST1RQ04912 1400 aa11.08□□□□□ -0.64
PPFIA2-228ENST00000553058 PHLPP1O60346 1717 aa11.07□□□□□ -0.64
PPFIA2-228ENST00000553058 PPP4CP60510 307 aa11.07□□□□□ -0.64
PPFIA2-228ENST00000553058 PAK2Q13177 524 aa11.07□□□□□ -0.64
PPFIA2-228ENST00000553058 SERINC3Q13530 473 aa11.07□□□□□ -0.64
PPFIA2-228ENST00000553058 STAG2Q8N3U4 1231 aa11.07□□□□□ -0.64
PPFIA2-228ENST00000553058 IFT57Q9NWB7 429 aa11.07□□□□□ -0.64
PPFIA2-228ENST00000553058 CDV3Q9UKY7 258 aaKnown RBP11.07□□□□□ -0.64
PPFIA2-228ENST00000553058 ENPP3O14638 875 aa11.06□□□□□ -0.64
PPFIA2-228ENST00000553058 ATF3P18847 181 aa11.06□□□□□ -0.64
PPFIA2-228ENST00000553058 DNM1Q05193 864 aaKnown RBP11.06□□□□□ -0.64
PPFIA2-228ENST00000553058 NBPF6Q5VWK0 638 aa11.06□□□□□ -0.64
PPFIA2-228ENST00000553058 FILIP1Q7Z7B0 1213 aa11.06□□□□□ -0.64
PPFIA2-228ENST00000553058 NBPF4Q96M43 638 aa11.06□□□□□ -0.64
PPFIA2-228ENST00000553058 PSMD1Q99460 953 aa11.06□□□□□ -0.64
PPFIA2-228ENST00000553058 PCDH12Q9NPG4 1184 aa11.06□□□□□ -0.64
PPFIA2-228ENST00000553058 INHAP05111 366 aa11.05□□□□□ -0.64
PPFIA2-228ENST00000553058 FOXK2Q01167 660 aa11.05□□□□□ -0.64
PPFIA2-228ENST00000553058 ORC1Q13415 861 aa11.05□□□□□ -0.64
PPFIA2-228ENST00000553058 LINC01559Q495D7 138 aa11.05□□□□□ -0.64
PPFIA2-228ENST00000553058 TBCELQ5QJ74 424 aa11.05□□□□□ -0.64
PPFIA2-228ENST00000553058 MRPL50Q8N5N7 158 aaKnown RBP11.05□□□□□ -0.64
PPFIA2-228ENST00000553058 GPRASP2Q96D09 838 aa11.05□□□□□ -0.64
PPFIA2-228ENST00000553058 MYO19Q96H55 970 aa11.05□□□□□ -0.64
PPFIA2-228ENST00000553058 SPATA31A6Q5VVP1 1343 aa11.05□□□□□ -0.64
PPFIA2-228ENST00000553058 ASXL1Q8IXJ9 1541 aa11.04□□□□□ -0.64
PPFIA2-228ENST00000553058 USP31Q70CQ4 1352 aa11.04□□□□□ -0.64
PPFIA2-228ENST00000553058 PRAG1Q86YV5 1406 aa11.04□□□□□ -0.64
PPFIA2-228ENST00000553058 ADGRL3Q9HAR2 1447 aa11.04□□□□□ -0.64
PPFIA2-228ENST00000553058 EIF1AYO14602 144 aaKnown RBP11.04□□□□□ -0.64
PPFIA2-228ENST00000553058 POTEJP0CG39 1038 aa11.04□□□□□ -0.64
PPFIA2-228ENST00000553058 TRMT44Q8IYL2 757 aaKnown RBP11.04□□□□□ -0.64
PPFIA2-228ENST00000553058 ZNF511Q8NB15 262 aa11.04□□□□□ -0.64
PPFIA2-228ENST00000553058 EDEM1Q92611 657 aa11.04□□□□□ -0.64
PPFIA2-228ENST00000553058 MKL1Q969V6 931 aa11.04□□□□□ -0.64
PPFIA2-228ENST00000553058 NEUROD4Q9HD90 331 aa11.04□□□□□ -0.64
PPFIA2-228ENST00000553058 ROBO2Q9HCK4 1378 aa11.03□□□□□ -0.64
PPFIA2-228ENST00000553058 SETD5Q9C0A6 1442 aa11.03□□□□□ -0.64
PPFIA2-228ENST00000553058 PDGFAP04085 211 aa11.03□□□□□ -0.64
PPFIA2-228ENST00000553058 SLC9A9Q8IVB4 645 aa11.03□□□□□ -0.64
PPFIA2-228ENST00000553058 SLC4A9Q96Q91 983 aa11.03□□□□□ -0.64
PPFIA2-228ENST00000553058 HPS5Q9UPZ3 1129 aa11.03□□□□□ -0.64
PPFIA2-228ENST00000553058 PTCH1Q13635 1447 aa11.02□□□□□ -0.64
PPFIA2-228ENST00000553058 OPLAHO14841 1288 aa11.02□□□□□ -0.65
PPFIA2-228ENST00000553058 TPD52L2O43399 206 aaKnown RBP11.02□□□□□ -0.65
PPFIA2-228ENST00000553058 ERVK-9P63128 1117 aa11.02□□□□□ -0.65
PPFIA2-228ENST00000553058 DDX17Q92841 729 aaKnown RBP11.02□□□□□ -0.65
PPFIA2-228ENST00000553058 KCTD15Q96SI1 283 aaPredicted RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms