RNA–Protein interactions for RNA: ENST00000552562.1

CBX5-205, Transcript of chromobox 5, humanhuman

TSL 4

Gene CBX5, Length 675 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-205ENST00000552562 SF3B3Q15393 1217 aaKnown RBP9.97□□□□□ -0.81
CBX5-205ENST00000552562 FAM161AQ3B820 660 aa9.97□□□□□ -0.81
CBX5-205ENST00000552562 CRY2Q49AN0 593 aa9.97□□□□□ -0.81
CBX5-205ENST00000552562 CCDC152Q4G0S7 254 aa9.97□□□□□ -0.81
CBX5-205ENST00000552562 ZNF622Q969S3 477 aaKnown RBP eCLIP9.97□□□□□ -0.811e-7■□□□□ 9.9
CBX5-205ENST00000552562 SYT17Q9BSW7 474 aa9.97□□□□□ -0.81
CBX5-205ENST00000552562 GREM2Q9H772 168 aa9.97□□□□□ -0.81
CBX5-205ENST00000552562 SEC31BQ9NQW1 1179 aa9.97□□□□□ -0.81
CBX5-205ENST00000552562 ZBTB40Q9NUA8 1239 aa9.97□□□□□ -0.81
CBX5-205ENST00000552562 RIC1Q4ADV7 1423 aa9.97□□□□□ -0.81
CBX5-205ENST00000552562 TNRC6CQ9HCJ0 1690 aaKnown RBP9.96□□□□□ -0.81
CBX5-205ENST00000552562 NRXN2Q9P2S2 1712 aa9.96□□□□□ -0.81
CBX5-205ENST00000552562 CSF1RP07333 972 aa9.96□□□□□ -0.82
CBX5-205ENST00000552562 SRGNP10124 158 aa9.96□□□□□ -0.82
CBX5-205ENST00000552562 NPR1P16066 1061 aa9.96□□□□□ -0.82
CBX5-205ENST00000552562 KCNA3P22001 575 aa9.96□□□□□ -0.82
CBX5-205ENST00000552562 VASPP50552 380 aaPredicted RBP9.96□□□□□ -0.82
CBX5-205ENST00000552562 GSE1Q14687 1217 aa9.96□□□□□ -0.82
CBX5-205ENST00000552562 RABL6Q3YEC7 729 aaPredicted RBP9.96□□□□□ -0.82
CBX5-205ENST00000552562 ITGA6P23229 1130 aa9.95□□□□□ -0.82
CBX5-205ENST00000552562 HOXA10P31260 410 aaPredicted RBP9.95□□□□□ -0.82
CBX5-205ENST00000552562 DDX46Q7L014 1031 aaKnown RBP9.95□□□□□ -0.82
CBX5-205ENST00000552562 SLC51AQ86UW1 340 aa9.95□□□□□ -0.82
CBX5-205ENST00000552562 KLHDC4Q8TBB5 520 aa9.95□□□□□ -0.82
CBX5-205ENST00000552562 CELF1Q92879 486 aaKnown RBP9.95□□□□□ -0.82
CBX5-205ENST00000552562 MASTLQ96GX5 879 aa9.95□□□□□ -0.82
CBX5-205ENST00000552562 RBM17Q96I25 401 aaKnown RBP9.95□□□□□ -0.82
CBX5-205ENST00000552562 ZNF594Q96JF6 807 aaPredicted RBP9.95□□□□□ -0.82
CBX5-205ENST00000552562 CHMP4BQ9H444 224 aaKnown RBP9.95□□□□□ -0.82
CBX5-205ENST00000552562 HDAC5Q9UQL6 1122 aa9.95□□□□□ -0.82
CBX5-205ENST00000552562 CACNA1FO60840 1977 aa9.94□□□□□ -0.82
CBX5-205ENST00000552562 AFDNP55196 1824 aaKnown RBP9.94□□□□□ -0.82
CBX5-205ENST00000552562 PNMA6EA0A0J9YXQ4 647 aa9.94□□□□□ -0.82
CBX5-205ENST00000552562 ANKRD18BA2A2Z9 1011 aa9.94□□□□□ -0.82
CBX5-205ENST00000552562 SRGAP3O43295 1099 aa9.94□□□□□ -0.82
CBX5-205ENST00000552562 IFIT5Q13325 482 aaKnown RBP9.94□□□□□ -0.82
CBX5-205ENST00000552562 CCDC57Q2TAC2 916 aa9.94□□□□□ -0.82
CBX5-205ENST00000552562 STYK1Q6J9G0 422 aa9.94□□□□□ -0.82
CBX5-205ENST00000552562 CEP85Q6P2H3 762 aa9.94□□□□□ -0.82
CBX5-205ENST00000552562 PIM2Q9P1W9 311 aa9.94□□□□□ -0.82
CBX5-205ENST00000552562 PDZRN3Q9UPQ7 1066 aa9.94□□□□□ -0.82
CBX5-205ENST00000552562 NEFLP07196 543 aa9.93□□□□□ -0.82
CBX5-205ENST00000552562 ALDH1B1P30837 517 aa9.93□□□□□ -0.82
CBX5-205ENST00000552562 ATP8B2P98198 1209 aa9.93□□□□□ -0.82
CBX5-205ENST00000552562 GRAPQ13588 217 aa9.93□□□□□ -0.82
CBX5-205ENST00000552562 TAF7LQ5H9L4 462 aa9.93□□□□□ -0.82
CBX5-205ENST00000552562 ZNF467Q7Z7K2 595 aaPredicted RBP9.93□□□□□ -0.82
CBX5-205ENST00000552562 GRAPLQ8TC17 118 aaPredicted RBP9.93□□□□□ -0.82
CBX5-205ENST00000552562 CNKSR1Q969H4 720 aa9.93□□□□□ -0.82
CBX5-205ENST00000552562 CRAMP1Q96RY5 1269 aa9.93□□□□□ -0.82
CBX5-205ENST00000552562 BCS1LQ9Y276 419 aa9.93□□□□□ -0.82
CBX5-205ENST00000552562 PCDHB15Q9Y5E8 787 aa9.93□□□□□ -0.82
CBX5-205ENST00000552562 LRP5O75197 1615 aa9.93□□□□□ -0.82
CBX5-205ENST00000552562 RTL9Q8NET4 1388 aa9.92□□□□□ -0.82
CBX5-205ENST00000552562 PPEF1O14829 653 aaPredicted RBP9.92□□□□□ -0.82
CBX5-205ENST00000552562 RFX5P48382 616 aaPredicted RBP9.92□□□□□ -0.82
CBX5-205ENST00000552562 RPS8P62241 208 aaKnown RBP9.92□□□□□ -0.82
CBX5-205ENST00000552562 MTX1Q13505 466 aa9.92□□□□□ -0.82
CBX5-205ENST00000552562 DALRD3Q5D0E6 543 aaKnown RBP9.92□□□□□ -0.82
CBX5-205ENST00000552562 PRPF40BQ6NWY9 871 aaKnown RBP9.92□□□□□ -0.82
CBX5-205ENST00000552562 OLFM4Q6UX06 510 aa9.92□□□□□ -0.82
CBX5-205ENST00000552562 ANKRD18AQ8IVF6 992 aa9.92□□□□□ -0.82
CBX5-205ENST00000552562 SIRT2Q8IXJ6 389 aa9.92□□□□□ -0.82
CBX5-205ENST00000552562 TTLL6Q8N841 843 aa9.92□□□□□ -0.82
CBX5-205ENST00000552562 CDC5LQ99459 802 aaKnown RBP9.92□□□□□ -0.82
CBX5-205ENST00000552562 PA2G4Q9UQ80 394 aaKnown RBP9.92□□□□□ -0.82
CBX5-205ENST00000552562 N4BP2Q86UW6 1770 aaPredicted RBP9.92□□□□□ -0.82
CBX5-205ENST00000552562 DDX60Q8IY21 1712 aaKnown RBP9.92□□□□□ -0.82
CBX5-205ENST00000552562 COL4A1P02462 1669 aa9.92□□□□□ -0.82
CBX5-205ENST00000552562 ANKRD31Q8N7Z5 1873 aa9.91□□□□□ -0.82
CBX5-205ENST00000552562 C21orf2O43822 256 aa9.91□□□□□ -0.82
CBX5-205ENST00000552562 BBOX1O75936 387 aa9.91□□□□□ -0.82
CBX5-205ENST00000552562 CHRM1P11229 460 aaPredicted RBP9.91□□□□□ -0.82
CBX5-205ENST00000552562 IGHMBP2P38935 993 aaKnown RBP9.91□□□□□ -0.82
CBX5-205ENST00000552562 PTPN12Q05209 780 aaKnown RBP9.91□□□□□ -0.82
CBX5-205ENST00000552562 RPAP2Q8IXW5 612 aaPredicted RBP9.91□□□□□ -0.82
CBX5-205ENST00000552562 MPHOSPH8Q99549 860 aa9.91□□□□□ -0.82
CBX5-205ENST00000552562 PUS3Q9BZE2 481 aaKnown RBP9.91□□□□□ -0.82
CBX5-205ENST00000552562 SIL1Q9H173 461 aa9.91□□□□□ -0.82
CBX5-205ENST00000552562 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.91□□□□□ -0.82
CBX5-205ENST00000552562 COL11A2P13942 1736 aaPredicted RBP9.9□□□□□ -0.82
CBX5-205ENST00000552562 LRRC24Q50LG9 513 aa9.9□□□□□ -0.82
CBX5-205ENST00000552562 LDHAL6AQ6ZMR3 332 aa9.9□□□□□ -0.82
CBX5-205ENST00000552562 PDCD7Q8N8D1 485 aaKnown RBP9.9□□□□□ -0.82
CBX5-205ENST00000552562 SSH3Q8TE77 659 aa9.9□□□□□ -0.82
CBX5-205ENST00000552562 CNNM1Q9NRU3 951 aa9.9□□□□□ -0.82
CBX5-205ENST00000552562 ATP6V0A2Q9Y487 856 aa9.9□□□□□ -0.82
CBX5-205ENST00000552562 LAMB2P55268 1798 aa9.89□□□□□ -0.83
CBX5-205ENST00000552562 SURF6O75683 361 aaKnown RBP9.89□□□□□ -0.83
CBX5-205ENST00000552562 YBX3P16989 372 aaKnown RBP eCLIP9.89□□□□□ -0.83
CBX5-205ENST00000552562 MMRN1Q13201 1228 aa9.89□□□□□ -0.83
CBX5-205ENST00000552562 SP8Q8IXZ3 490 aa9.89□□□□□ -0.83
CBX5-205ENST00000552562 COPRSQ9NQ92 184 aa9.89□□□□□ -0.83
CBX5-205ENST00000552562 BSDC1Q9NW68 430 aaPredicted RBP9.89□□□□□ -0.83
CBX5-205ENST00000552562 KIAA1551Q9HCM1 1747 aa9.89□□□□□ -0.83
CBX5-205ENST00000552562 EYA2O00167 538 aa9.88□□□□□ -0.83
CBX5-205ENST00000552562 SNPHO15079 494 aa9.88□□□□□ -0.83
CBX5-205ENST00000552562 HMMRO75330 724 aa9.88□□□□□ -0.83
CBX5-205ENST00000552562 TAF5LO75529 589 aa9.88□□□□□ -0.83
CBX5-205ENST00000552562 GPSM2P81274 684 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms