RNA–Protein interactions for RNA: ENST00000552374.6

TMEM116-215, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM116, Length 1,408 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-215ENST00000552374 WDR90Q96KV7 1748 aa13.85□□□□□ -0.19
TMEM116-215ENST00000552374 DICER1Q9UPY3 1922 aaKnown RBP13.84□□□□□ -0.19
TMEM116-215ENST00000552374 ITGA6P23229 1130 aa13.84□□□□□ -0.19
TMEM116-215ENST00000552374 MAP1SQ66K74 1059 aaPredicted RBP13.84□□□□□ -0.19
TMEM116-215ENST00000552374 CNTROBQ8N137 903 aa13.84□□□□□ -0.19
TMEM116-215ENST00000552374 SSH1Q8WYL5 1049 aa13.84□□□□□ -0.19
TMEM116-215ENST00000552374 MPHOSPH8Q99549 860 aa13.84□□□□□ -0.19
TMEM116-215ENST00000552374 SRCIN1Q9C0H9 1055 aa13.84□□□□□ -0.19
TMEM116-215ENST00000552374 KCNQ5Q9NR82 932 aa13.84□□□□□ -0.19
TMEM116-215ENST00000552374 GPRC5DQ9NZD1 345 aa13.84□□□□□ -0.19
TMEM116-215ENST00000552374 MINPP1Q9UNW1 487 aa13.84□□□□□ -0.19
TMEM116-215ENST00000552374 WTIPA6NIX2 430 aaPredicted RBP13.83□□□□□ -0.2
TMEM116-215ENST00000552374 ECE2O60344 883 aa13.83□□□□□ -0.2
TMEM116-215ENST00000552374 CSF1RP07333 972 aa13.83□□□□□ -0.2
TMEM116-215ENST00000552374 ATP2B4P23634 1241 aa13.83□□□□□ -0.2
TMEM116-215ENST00000552374 FAM161AQ3B820 660 aa13.83□□□□□ -0.2
TMEM116-215ENST00000552374 CNOT7Q9UIV1 285 aaKnown RBP13.83□□□□□ -0.2
TMEM116-215ENST00000552374 ZBTB12Q9Y330 459 aaPredicted RBP13.83□□□□□ -0.2
TMEM116-215ENST00000552374 XDHP47989 1333 aa13.83□□□□□ -0.2
TMEM116-215ENST00000552374 ANKRD18BA2A2Z9 1011 aa13.82□□□□□ -0.2
TMEM116-215ENST00000552374 GRM8O00222 908 aa13.82□□□□□ -0.2
TMEM116-215ENST00000552374 PSMD14O00487 310 aa13.82□□□□□ -0.2
TMEM116-215ENST00000552374 ALDH1L1O75891 902 aa13.82□□□□□ -0.2
TMEM116-215ENST00000552374 TRMT2AQ8IZ69 625 aaKnown RBP13.82□□□□□ -0.2
TMEM116-215ENST00000552374 KLRG1Q96E93 195 aa13.82□□□□□ -0.2
TMEM116-215ENST00000552374 TAF1P21675 1872 aa13.82□□□□□ -0.2
TMEM116-215ENST00000552374 DDX60Q8IY21 1712 aaKnown RBP13.82□□□□□ -0.2
TMEM116-215ENST00000552374 H7C1D1 291 aa13.81□□□□□ -0.2
TMEM116-215ENST00000552374 ITGBL1O95965 494 aaPredicted RBP13.81□□□□□ -0.2
TMEM116-215ENST00000552374 FOXO4P98177 505 aa13.81□□□□□ -0.2
TMEM116-215ENST00000552374 IFIT5Q13325 482 aaKnown RBP13.81□□□□□ -0.2
TMEM116-215ENST00000552374 LMBR1LQ6UX01 489 aa13.81□□□□□ -0.2
TMEM116-215ENST00000552374 USP50Q70EL3 339 aaPredicted RBP13.81□□□□□ -0.2
TMEM116-215ENST00000552374 ADARB2Q9NS39 739 aaKnown RBP13.81□□□□□ -0.2
TMEM116-215ENST00000552374 SMC4Q9NTJ3 1288 aa13.81□□□□□ -0.2
TMEM116-215ENST00000552374 COL4A1P02462 1669 aa13.81□□□□□ -0.2
TMEM116-215ENST00000552374 LAMB2P55268 1798 aa13.81□□□□□ -0.2
TMEM116-215ENST00000552374 SHTN1A0MZ66 631 aa13.81□□□□□ -0.2
TMEM116-215ENST00000552374 EPHA10Q5JZY3 1008 aa13.81□□□□□ -0.2
TMEM116-215ENST00000552374 RTL9Q8NET4 1388 aa13.81□□□□□ -0.2
TMEM116-215ENST00000552374 PTPRCP08575 1304 aa13.8□□□□□ -0.2
TMEM116-215ENST00000552374 CCT4P50991 539 aaKnown RBP13.8□□□□□ -0.2
TMEM116-215ENST00000552374 CCDC57Q2TAC2 916 aa13.8□□□□□ -0.2
TMEM116-215ENST00000552374 ALDH1L2Q3SY69 923 aa13.8□□□□□ -0.2
TMEM116-215ENST00000552374 TAF7LQ5H9L4 462 aa13.8□□□□□ -0.2
TMEM116-215ENST00000552374 PASKQ96RG2 1323 aa13.79□□□□□ -0.2
TMEM116-215ENST00000552374 NBPF7P0C2Y1 421 aaPredicted RBP13.79□□□□□ -0.2
TMEM116-215ENST00000552374 RBM26Q5T8P6 1007 aaKnown RBP13.79□□□□□ -0.2
TMEM116-215ENST00000552374 MICALL2Q8IY33 904 aa13.79□□□□□ -0.2
TMEM116-215ENST00000552374 DPF2Q92785 391 aa13.79□□□□□ -0.2
TMEM116-215ENST00000552374 ZNF594Q96JF6 807 aaPredicted RBP13.79□□□□□ -0.2
TMEM116-215ENST00000552374 ANKRD2Q9GZV1 360 aa13.79□□□□□ -0.2
TMEM116-215ENST00000552374 CREBZFQ9NS37 354 aa13.79□□□□□ -0.2
TMEM116-215ENST00000552374 TMEM88BA6NKF7 163 aa13.78□□□□□ -0.2
TMEM116-215ENST00000552374 PLIN1O60240 522 aa13.78□□□□□ -0.2
TMEM116-215ENST00000552374 KCNJ4P48050 445 aa13.78□□□□□ -0.2
TMEM116-215ENST00000552374 CHRNDQ07001 517 aa13.78□□□□□ -0.2
TMEM116-215ENST00000552374 SAMD7Q7Z3H4 446 aa13.78□□□□□ -0.2
TMEM116-215ENST00000552374 HELBQ8NG08 1087 aaPredicted RBP13.78□□□□□ -0.2
TMEM116-215ENST00000552374 SUCLG2Q96I99 432 aa13.78□□□□□ -0.2
TMEM116-215ENST00000552374 MKRN1Q9UHC7 482 aaKnown RBP13.78□□□□□ -0.2
TMEM116-215ENST00000552374 NOB1Q9ULX3 412 aaKnown RBP13.78□□□□□ -0.2
TMEM116-215ENST00000552374 LEMD3Q9Y2U8 911 aa13.78□□□□□ -0.2
TMEM116-215ENST00000552374 TAF5LO75529 589 aa13.77□□□□□ -0.21
TMEM116-215ENST00000552374 VIL1P09327 827 aaKnown RBP13.77□□□□□ -0.21
TMEM116-215ENST00000552374 CT47B1P0C2W7 299 aaPredicted RBP13.77□□□□□ -0.21
TMEM116-215ENST00000552374 HIRAP54198 1017 aaPredicted RBP13.77□□□□□ -0.21
TMEM116-215ENST00000552374 FMR1Q06787 632 aaKnown RBP eCLIP13.77□□□□□ -0.21
TMEM116-215ENST00000552374 TBC1D10BQ4KMP7 808 aaPredicted RBP13.77□□□□□ -0.21
TMEM116-215ENST00000552374 LDHAL6AQ6ZMR3 332 aa13.77□□□□□ -0.21
TMEM116-215ENST00000552374 PODNQ7Z5L7 613 aa13.77□□□□□ -0.21
TMEM116-215ENST00000552374 TRPM4Q8TD43 1214 aa13.77□□□□□ -0.21
TMEM116-215ENST00000552374 FBXW7Q969H0 707 aa13.77□□□□□ -0.21
TMEM116-215ENST00000552374 DUOX1Q9NRD9 1551 aa13.77□□□□□ -0.21
TMEM116-215ENST00000552374 ZNF804BA4D1E1 1349 aa13.77□□□□□ -0.21
TMEM116-215ENST00000552374 PCNTO95613 3336 aa13.77□□□□□ -0.21
TMEM116-215ENST00000552374 USP17L3A6NCW0 530 aa13.76□□□□□ -0.21
TMEM116-215ENST00000552374 USP17L4A6NCW7 530 aa13.76□□□□□ -0.21
TMEM116-215ENST00000552374 SNAP23O00161 211 aa13.76□□□□□ -0.21
TMEM116-215ENST00000552374 TRAF5O00463 557 aa13.76□□□□□ -0.21
TMEM116-215ENST00000552374 RPS12P25398 132 aaKnown RBP13.76□□□□□ -0.21
TMEM116-215ENST00000552374 HNRNPUQ00839 825 aaKnown RBP eCLIP13.76□□□□□ -0.21
TMEM116-215ENST00000552374 USP17L1Q7RTZ2 530 aa13.76□□□□□ -0.21
TMEM116-215ENST00000552374 TXNRD3Q86VQ6 643 aa13.76□□□□□ -0.21
TMEM116-215ENST00000552374 CNNM1Q9NRU3 951 aa13.76□□□□□ -0.21
TMEM116-215ENST00000552374 RSBN1LQ6PCB5 846 aaPredicted RBP13.75□□□□□ -0.21
TMEM116-215ENST00000552374 KAZALD1Q96I82 304 aa13.75□□□□□ -0.21
TMEM116-215ENST00000552374 SCN4AP35499 1836 aa13.75□□□□□ -0.21
TMEM116-215ENST00000552374 KLRK1P26718 216 aa13.74□□□□□ -0.21
TMEM116-215ENST00000552374 RARSP54136 660 aaKnown RBP13.74□□□□□ -0.21
TMEM116-215ENST00000552374 ZC3H15Q8WU90 426 aaKnown RBP13.74□□□□□ -0.21
TMEM116-215ENST00000552374 GLIS2Q9BZE0 524 aaPredicted RBP13.74□□□□□ -0.21
TMEM116-215ENST00000552374 COA1Q9GZY4 146 aa13.74□□□□□ -0.21
TMEM116-215ENST00000552374 USP44Q9H0E7 712 aa13.74□□□□□ -0.21
TMEM116-215ENST00000552374 BICC1Q9H694 974 aaKnown RBP13.74□□□□□ -0.21
TMEM116-215ENST00000552374 ABT1Q9ULW3 272 aaKnown RBP13.74□□□□□ -0.21
TMEM116-215ENST00000552374 EGFRP00533 1210 aa13.73□□□□□ -0.21
TMEM116-215ENST00000552374 USP48Q86UV5 1035 aa13.73□□□□□ -0.21
TMEM116-215ENST00000552374 JMYQ8N9B5 988 aa13.73□□□□□ -0.21
TMEM116-215ENST00000552374 AGBL3Q8NEM8 1001 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms