RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 USP21Q9UK80 565 aa13.86□□□□□ -0.19
RAB5C-208ENST00000551338 RIPOR2Q9Y4F9 1068 aa13.86□□□□□ -0.19
RAB5C-208ENST00000551338 TCHHQ07283 1943 aa13.86□□□□□ -0.19
RAB5C-208ENST00000551338 ANKRD18BA2A2Z9 1011 aa13.85□□□□□ -0.19
RAB5C-208ENST00000551338 CHGBP05060 677 aa13.85□□□□□ -0.19
RAB5C-208ENST00000551338 AK2P54819 239 aa13.85□□□□□ -0.19
RAB5C-208ENST00000551338 NUCB2P80303 420 aa13.85□□□□□ -0.19
RAB5C-208ENST00000551338 ADCK5Q3MIX3 580 aa13.85□□□□□ -0.19
RAB5C-208ENST00000551338 GBP4Q96PP9 640 aa13.85□□□□□ -0.19
RAB5C-208ENST00000551338 PAG1Q9NWQ8 432 aa13.85□□□□□ -0.19
RAB5C-208ENST00000551338 AKAP2Q9Y2D5 859 aa13.85□□□□□ -0.19
RAB5C-208ENST00000551338 CNTNAP4Q9C0A0 1308 aa13.85□□□□□ -0.19
RAB5C-208ENST00000551338 CHD4Q14839 1912 aa13.84□□□□□ -0.19
RAB5C-208ENST00000551338 MYH13Q9UKX3 1938 aa13.84□□□□□ -0.19
RAB5C-208ENST00000551338 ATRNO75882 1429 aa13.84□□□□□ -0.19
RAB5C-208ENST00000551338 GOLIM4O00461 696 aa13.84□□□□□ -0.19
RAB5C-208ENST00000551338 TAF5LO75529 589 aa13.84□□□□□ -0.19
RAB5C-208ENST00000551338 NTSR2O95665 410 aa13.84□□□□□ -0.19
RAB5C-208ENST00000551338 IFIT1P09914 478 aaKnown RBP13.84□□□□□ -0.19
RAB5C-208ENST00000551338 CPA1P15085 419 aa13.84□□□□□ -0.19
RAB5C-208ENST00000551338 PARP10Q53GL7 1025 aa13.84□□□□□ -0.19
RAB5C-208ENST00000551338 PTF1AQ7RTS3 328 aa13.84□□□□□ -0.19
RAB5C-208ENST00000551338 VGLL2Q8N8G2 317 aa13.84□□□□□ -0.19
RAB5C-208ENST00000551338 XAGE2Q96GT9 111 aa13.84□□□□□ -0.19
RAB5C-208ENST00000551338 INTS4Q96HW7 963 aaKnown RBP13.84□□□□□ -0.19
RAB5C-208ENST00000551338 AK7Q96M32 723 aa13.84□□□□□ -0.19
RAB5C-208ENST00000551338 JAKMIP1Q96N16 626 aaKnown RBP13.84□□□□□ -0.19
RAB5C-208ENST00000551338 ZSWIM6Q9HCJ5 1215 aa13.84□□□□□ -0.19
RAB5C-208ENST00000551338 UBR3Q6ZT12 1888 aa13.83□□□□□ -0.2
RAB5C-208ENST00000551338 CASTP20810 708 aaKnown RBP13.83□□□□□ -0.2
RAB5C-208ENST00000551338 PKP1Q13835 747 aa13.83□□□□□ -0.2
RAB5C-208ENST00000551338 ATP2B3Q16720 1220 aa13.83□□□□□ -0.2
RAB5C-208ENST00000551338 METTL24Q5JXM2 366 aa13.83□□□□□ -0.2
RAB5C-208ENST00000551338 ZMYM1Q5SVZ6 1142 aa13.83□□□□□ -0.2
RAB5C-208ENST00000551338 USPL1Q5W0Q7 1092 aa13.83□□□□□ -0.2
RAB5C-208ENST00000551338 CCDC129Q6ZRS4 1044 aa13.83□□□□□ -0.2
RAB5C-208ENST00000551338 TICAM2Q86XR7 235 aa13.83□□□□□ -0.2
RAB5C-208ENST00000551338 CERKQ8TCT0 537 aa13.83□□□□□ -0.2
RAB5C-208ENST00000551338 SEC62Q99442 399 aaKnown RBP13.83□□□□□ -0.2
RAB5C-208ENST00000551338 ZDHHC9Q9Y397 364 aa13.83□□□□□ -0.2
RAB5C-208ENST00000551338 RTL9Q8NET4 1388 aa13.83□□□□□ -0.2
RAB5C-208ENST00000551338 BAG4O95429 457 aaKnown RBP13.82□□□□□ -0.2
RAB5C-208ENST00000551338 KCNJ4P48050 445 aa13.82□□□□□ -0.2
RAB5C-208ENST00000551338 MCMDC2Q4G0Z9 681 aa13.82□□□□□ -0.2
RAB5C-208ENST00000551338 TTC39AQ5SRH9 613 aa13.82□□□□□ -0.2
RAB5C-208ENST00000551338 LDHAL6AQ6ZMR3 332 aa13.82□□□□□ -0.2
RAB5C-208ENST00000551338 RUFY3Q7L099 469 aa13.82□□□□□ -0.2
RAB5C-208ENST00000551338 UTP14AQ9BVJ6 771 aaKnown RBP13.82□□□□□ -0.2
RAB5C-208ENST00000551338 TAF6LQ9Y6J9 622 aa13.82□□□□□ -0.2
RAB5C-208ENST00000551338 TNRC6CQ9HCJ0 1690 aaKnown RBP13.82□□□□□ -0.2
RAB5C-208ENST00000551338 TRAK2O60296 914 aa13.81□□□□□ -0.2
RAB5C-208ENST00000551338 LARGE1O95461 756 aa13.81□□□□□ -0.2
RAB5C-208ENST00000551338 HCLS1P14317 486 aaPredicted RBP13.81□□□□□ -0.2
RAB5C-208ENST00000551338 SCARF1Q14162 830 aa13.81□□□□□ -0.2
RAB5C-208ENST00000551338 CCDC158Q5M9N0 1113 aa13.81□□□□□ -0.2
RAB5C-208ENST00000551338 VPS53Q5VIR6 699 aa13.81□□□□□ -0.2
RAB5C-208ENST00000551338 CNNM1Q9NRU3 951 aa13.81□□□□□ -0.2
RAB5C-208ENST00000551338 HELLSQ9NRZ9 838 aa13.81□□□□□ -0.2
RAB5C-208ENST00000551338 HMG20BQ9P0W2 317 aa13.81□□□□□ -0.2
RAB5C-208ENST00000551338 NIP7Q9Y221 180 aaKnown RBP eCLIP13.81□□□□□ -0.2
RAB5C-208ENST00000551338 MYH15Q9Y2K3 1946 aa13.8□□□□□ -0.2
RAB5C-208ENST00000551338 FAM177BA6PVY3 158 aa13.8□□□□□ -0.2
RAB5C-208ENST00000551338 ZKSCAN1P17029 563 aaPredicted RBP13.8□□□□□ -0.2
RAB5C-208ENST00000551338 COL9A3Q14050 684 aaPredicted RBP13.8□□□□□ -0.2
RAB5C-208ENST00000551338 TSGA10IPQ3SY00 556 aa13.8□□□□□ -0.2
RAB5C-208ENST00000551338 SLFNL1Q499Z3 407 aa13.8□□□□□ -0.2
RAB5C-208ENST00000551338 RNF20Q5VTR2 975 aa13.8□□□□□ -0.2
RAB5C-208ENST00000551338 PDRG1Q9NUG6 133 aa13.8□□□□□ -0.2
RAB5C-208ENST00000551338 CYP46A1Q9Y6A2 500 aa13.8□□□□□ -0.2
RAB5C-208ENST00000551338 U3KPZ7 1027 aaPredicted RBP13.8□□□□□ -0.2
RAB5C-208ENST00000551338 MAST3O60307 1309 aa13.8□□□□□ -0.2
RAB5C-208ENST00000551338 AFF2P51816 1311 aa13.8□□□□□ -0.2
RAB5C-208ENST00000551338 RNF113AO15541 343 aaKnown RBP13.79□□□□□ -0.2
RAB5C-208ENST00000551338 PTMSP20962 102 aa13.79□□□□□ -0.2
RAB5C-208ENST00000551338 PSMA5P28066 241 aa13.79□□□□□ -0.2
RAB5C-208ENST00000551338 HSPA1LP34931 641 aa13.79□□□□□ -0.2
RAB5C-208ENST00000551338 ZAP70P43403 619 aa13.79□□□□□ -0.2
RAB5C-208ENST00000551338 KCNQ4P56696 695 aa13.79□□□□□ -0.2
RAB5C-208ENST00000551338 ST3GAL1Q11201 340 aa13.79□□□□□ -0.2
RAB5C-208ENST00000551338 GORABQ5T7V8 394 aa13.79□□□□□ -0.2
RAB5C-208ENST00000551338 LIMCH1Q9UPQ0 1083 aa13.79□□□□□ -0.2
RAB5C-208ENST00000551338 ZNF652Q9Y2D9 606 aa13.79□□□□□ -0.2
RAB5C-208ENST00000551338 M0R2C6 588 aa13.78□□□□□ -0.2
RAB5C-208ENST00000551338 RGL2O15211 777 aa13.78□□□□□ -0.2
RAB5C-208ENST00000551338 PDE8BO95263 885 aa13.78□□□□□ -0.2
RAB5C-208ENST00000551338 BRD1O95696 1058 aa13.78□□□□□ -0.2
RAB5C-208ENST00000551338 FGFR2P21802 821 aa13.78□□□□□ -0.2
RAB5C-208ENST00000551338 RC3H1Q5TC82 1133 aaKnown RBP13.78□□□□□ -0.2
RAB5C-208ENST00000551338 CLEC4GQ6UXB4 293 aa13.78□□□□□ -0.2
RAB5C-208ENST00000551338 ZNF512BQ96KM6 892 aaPredicted RBP13.78□□□□□ -0.2
RAB5C-208ENST00000551338 GJD4Q96KN9 370 aaPredicted RBP13.78□□□□□ -0.2
RAB5C-208ENST00000551338 LARP6Q9BRS8 491 aaKnown RBP13.78□□□□□ -0.2
RAB5C-208ENST00000551338 DSCC1Q9BVC3 393 aa13.78□□□□□ -0.2
RAB5C-208ENST00000551338 BCL2L12Q9HB09 334 aa13.78□□□□□ -0.2
RAB5C-208ENST00000551338 MROH5Q6ZUA9 1318 aa13.78□□□□□ -0.2
RAB5C-208ENST00000551338 RPS6KB1P23443 525 aa13.77□□□□□ -0.21
RAB5C-208ENST00000551338 MCAMP43121 646 aa13.77□□□□□ -0.21
RAB5C-208ENST00000551338 FAM182BQ5T319 152 aa13.77□□□□□ -0.21
RAB5C-208ENST00000551338 MEX3CQ5U5Q3 659 aaKnown RBP13.77□□□□□ -0.21
RAB5C-208ENST00000551338 BLOC1S2Q6QNY1 142 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms