RNA–Protein interactions for RNA: ENST00000550661.1

PTPRR-210, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 3

Gene PTPRR, Length 1,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-210ENST00000550661 C5P01031 1676 aa7.7□□□□□ -1.18
PTPRR-210ENST00000550661 LAMB4A4D0S4 1761 aa7.7□□□□□ -1.18
PTPRR-210ENST00000550661 CFAP99D6REC4 459 aa7.7□□□□□ -1.18
PTPRR-210ENST00000550661 E9PSI1 815 aa7.7□□□□□ -1.18
PTPRR-210ENST00000550661 CHL1O00533 1208 aa7.7□□□□□ -1.18
PTPRR-210ENST00000550661 PLSCR1O15162 318 aa7.7□□□□□ -1.18
PTPRR-210ENST00000550661 LILRB3O75022 631 aa7.7□□□□□ -1.18
PTPRR-210ENST00000550661 HMGB2P26583 209 aaKnown RBP7.7□□□□□ -1.18
PTPRR-210ENST00000550661 BAG6P46379 1132 aa7.7□□□□□ -1.18
PTPRR-210ENST00000550661 TSC1Q92574 1164 aa7.7□□□□□ -1.18
PTPRR-210ENST00000550661 MYH16Q9H6N6 1097 aa7.7□□□□□ -1.18
PTPRR-210ENST00000550661 ATG3Q9NT62 314 aa7.7□□□□□ -1.18
PTPRR-210ENST00000550661 FANCIQ9NVI1 1328 aa7.7□□□□□ -1.18
PTPRR-210ENST00000550661 TJP1Q07157 1748 aa7.69□□□□□ -1.18
PTPRR-210ENST00000550661 SENP3-EIF4A1A0A087X0R7 540 aa7.69□□□□□ -1.18
PTPRR-210ENST00000550661 CD2BP2O95400 341 aaKnown RBP7.69□□□□□ -1.18
PTPRR-210ENST00000550661 APBA3O96018 575 aa7.69□□□□□ -1.18
PTPRR-210ENST00000550661 RTL5Q5HYW3 569 aaPredicted RBP7.69□□□□□ -1.18
PTPRR-210ENST00000550661 SLC27A3Q5K4L6 730 aa7.69□□□□□ -1.18
PTPRR-210ENST00000550661 DESI1Q6ICB0 168 aa7.69□□□□□ -1.18
PTPRR-210ENST00000550661 PTF1AQ7RTS3 328 aa7.69□□□□□ -1.18
PTPRR-210ENST00000550661 PROCA1Q8NCQ7 364 aaPredicted RBP7.69□□□□□ -1.18
PTPRR-210ENST00000550661 FMNL2Q96PY5 1086 aa7.69□□□□□ -1.18
PTPRR-210ENST00000550661 MBIPQ9NS73 344 aa7.69□□□□□ -1.18
PTPRR-210ENST00000550661 ASAP1Q9ULH1 1129 aa7.69□□□□□ -1.18
PTPRR-210ENST00000550661 SOS1Q07889 1333 aaPredicted RBP7.69□□□□□ -1.18
PTPRR-210ENST00000550661 HEG1Q9ULI3 1381 aa7.69□□□□□ -1.18
PTPRR-210ENST00000550661 LOC102724428A0A0B4J2F2 783 aa7.68□□□□□ -1.18
PTPRR-210ENST00000550661 GFRA3O60609 400 aa7.68□□□□□ -1.18
PTPRR-210ENST00000550661 HOXB7P09629 217 aa7.68□□□□□ -1.18
PTPRR-210ENST00000550661 CCNYL3P0C7X3 344 aa7.68□□□□□ -1.18
PTPRR-210ENST00000550661 SIK1P57059 783 aa7.68□□□□□ -1.18
PTPRR-210ENST00000550661 SLC39A6Q13433 755 aa7.68□□□□□ -1.18
PTPRR-210ENST00000550661 PTPRNQ16849 979 aa7.68□□□□□ -1.18
PTPRR-210ENST00000550661 CCNL1Q9UK58 526 aaPredicted RBP7.68□□□□□ -1.18
PTPRR-210ENST00000550661 LAS1LQ9Y4W2 734 aaKnown RBP7.68□□□□□ -1.18
PTPRR-210ENST00000550661 COL5A3P25940 1745 aaPredicted RBP7.68□□□□□ -1.18
PTPRR-210ENST00000550661 NUP188Q5SRE5 1749 aa7.68□□□□□ -1.18
PTPRR-210ENST00000550661 PTCD1O75127 700 aaKnown RBP7.67□□□□□ -1.18
PTPRR-210ENST00000550661 EIF4A1P60842 406 aaKnown RBP7.67□□□□□ -1.18
PTPRR-210ENST00000550661 TSR2Q969E8 191 aaKnown RBP7.67□□□□□ -1.18
PTPRR-210ENST00000550661 ZNF496Q96IT1 587 aaPredicted RBP7.67□□□□□ -1.18
PTPRR-210ENST00000550661 PDZRN3Q9UPQ7 1066 aa7.67□□□□□ -1.18
PTPRR-210ENST00000550661 C4BP0C0L5 1744 aa7.66□□□□□ -1.18
PTPRR-210ENST00000550661 SNRPA1P09661 255 aaKnown RBP7.66□□□□□ -1.18
PTPRR-210ENST00000550661 SLFN5Q08AF3 891 aa7.66□□□□□ -1.18
PTPRR-210ENST00000550661 TRIM32Q13049 653 aa7.66□□□□□ -1.18
PTPRR-210ENST00000550661 TXNRD1Q16881 649 aa7.66□□□□□ -1.18
PTPRR-210ENST00000550661 PTCRAQ6ISU1 281 aaPredicted RBP7.66□□□□□ -1.18
PTPRR-210ENST00000550661 LYPD8Q6UX82 237 aa7.66□□□□□ -1.18
PTPRR-210ENST00000550661 CAMKK2Q96RR4 588 aa7.66□□□□□ -1.18
PTPRR-210ENST00000550661 TEX13AQ9BXU3 409 aaPredicted RBP7.66□□□□□ -1.18
PTPRR-210ENST00000550661 CHMP4AQ9BY43 222 aa7.66□□□□□ -1.18
PTPRR-210ENST00000550661 MIS18AQ9NYP9 233 aa7.66□□□□□ -1.18
PTPRR-210ENST00000550661 ERBB4Q15303 1308 aa7.66□□□□□ -1.18
PTPRR-210ENST00000550661 CNTNAP4Q9C0A0 1308 aa7.66□□□□□ -1.18
PTPRR-210ENST00000550661 KCNQ3O43525 872 aa7.65□□□□□ -1.18
PTPRR-210ENST00000550661 GIGYF1O75420 1035 aaPredicted RBP7.65□□□□□ -1.18
PTPRR-210ENST00000550661 CT47B1P0C2W7 299 aaPredicted RBP7.65□□□□□ -1.18
PTPRR-210ENST00000550661 FOXC1Q12948 553 aa7.65□□□□□ -1.18
PTPRR-210ENST00000550661 LAPTM4AQ15012 233 aa7.65□□□□□ -1.18
PTPRR-210ENST00000550661 DUSP27Q5VZP5 1158 aa7.65□□□□□ -1.18
PTPRR-210ENST00000550661 DEFB132Q7Z7B7 95 aa7.65□□□□□ -1.18
PTPRR-210ENST00000550661 TRMT2AQ8IZ69 625 aaKnown RBP7.65□□□□□ -1.18
PTPRR-210ENST00000550661 HELBQ8NG08 1087 aaPredicted RBP7.65□□□□□ -1.18
PTPRR-210ENST00000550661 PCMTD1Q96MG8 357 aaPredicted RBP7.65□□□□□ -1.18
PTPRR-210ENST00000550661 YTHDC1Q96MU7 727 aaKnown RBP7.65□□□□□ -1.18
PTPRR-210ENST00000550661 SLC4A9Q96Q91 983 aa7.65□□□□□ -1.18
PTPRR-210ENST00000550661 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.65□□□□□ -1.18
PTPRR-210ENST00000550661 EVA1BQ9NVM1 165 aa7.65□□□□□ -1.18
PTPRR-210ENST00000550661 TNFRSF10AO00220 468 aa7.64□□□□□ -1.19
PTPRR-210ENST00000550661 NRG2O14511 850 aaPredicted RBP7.64□□□□□ -1.19
PTPRR-210ENST00000550661 STARD3NLO95772 234 aa7.64□□□□□ -1.19
PTPRR-210ENST00000550661 CTHP32929 405 aa7.64□□□□□ -1.19
PTPRR-210ENST00000550661 KCNH2Q12809 1159 aa7.64□□□□□ -1.19
PTPRR-210ENST00000550661 ITPK1Q13572 414 aa7.64□□□□□ -1.19
PTPRR-210ENST00000550661 EZH2Q15910 746 aaKnown RBP7.64□□□□□ -1.19
PTPRR-210ENST00000550661 HDGFL1Q5TGJ6 251 aa7.64□□□□□ -1.19
PTPRR-210ENST00000550661 TRIM67Q6ZTA4 783 aa7.64□□□□□ -1.19
PTPRR-210ENST00000550661 LINC00116Q8NCU8 138 aa7.64□□□□□ -1.19
PTPRR-210ENST00000550661 ZNF428Q96B54 188 aa7.64□□□□□ -1.19
PTPRR-210ENST00000550661 GOPCQ9HD26 462 aa7.64□□□□□ -1.19
PTPRR-210ENST00000550661 LRRC4BQ9NT99 713 aa7.64□□□□□ -1.19
PTPRR-210ENST00000550661 TAF1LQ8IZX4 1826 aa7.64□□□□□ -1.19
PTPRR-210ENST00000550661 SOCS7O14512 581 aa7.63□□□□□ -1.19
PTPRR-210ENST00000550661 GDF9O60383 454 aa7.63□□□□□ -1.19
PTPRR-210ENST00000550661 CYP19A1P11511 503 aaPredicted RBP7.63□□□□□ -1.19
PTPRR-210ENST00000550661 EXOSC9Q06265 439 aaKnown RBP7.63□□□□□ -1.19
PTPRR-210ENST00000550661 KRT24Q2M2I5 525 aa7.63□□□□□ -1.19
PTPRR-210ENST00000550661 TWISTNBQ3B726 338 aaPredicted RBP7.63□□□□□ -1.19
PTPRR-210ENST00000550661 DNAJC10Q8IXB1 793 aa7.63□□□□□ -1.19
PTPRR-210ENST00000550661 UNC93B1Q9H1C4 597 aa7.63□□□□□ -1.19
PTPRR-210ENST00000550661 PKD2L1Q9P0L9 805 aa7.63□□□□□ -1.19
PTPRR-210ENST00000550661 QSER1Q2KHR3 1735 aa7.63□□□□□ -1.19
PTPRR-210ENST00000550661 PRAMEF22A3QJZ6 481 aa7.62□□□□□ -1.19
PTPRR-210ENST00000550661 CRKLP46109 303 aaKnown RBP7.62□□□□□ -1.19
PTPRR-210ENST00000550661 PRR20EP86478 221 aa7.62□□□□□ -1.19
PTPRR-210ENST00000550661 PRR20CP86479 221 aa7.62□□□□□ -1.19
PTPRR-210ENST00000550661 PRR20DP86480 221 aa7.62□□□□□ -1.19
PTPRR-210ENST00000550661 PRR20BP86481 221 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms