RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 GOLGA8AA7E2F4 631 aa11.81□□□□□ -0.52
SMARCC2-209ENST00000550164 IARSP41252 1262 aaKnown RBP11.81□□□□□ -0.52
SMARCC2-209ENST00000550164 OTUD7BQ6GQQ9 843 aa11.81□□□□□ -0.52
SMARCC2-209ENST00000550164 KIAA1524Q8TCG1 905 aa11.81□□□□□ -0.52
SMARCC2-209ENST00000550164 ZNHIT6Q9NWK9 470 aaKnown RBP11.81□□□□□ -0.52
SMARCC2-209ENST00000550164 LARGE1O95461 756 aa11.81□□□□□ -0.52
SMARCC2-209ENST00000550164 AKAP4Q5JQC9 854 aa11.81□□□□□ -0.52
SMARCC2-209ENST00000550164 IL17REQ8NFR9 667 aa11.81□□□□□ -0.52
SMARCC2-209ENST00000550164 ERO1AQ96HE7 468 aa11.81□□□□□ -0.52
SMARCC2-209ENST00000550164 STRN4Q9NRL3 753 aa11.81□□□□□ -0.52
SMARCC2-209ENST00000550164 AKAP2Q9Y2D5 859 aa11.81□□□□□ -0.52
SMARCC2-209ENST00000550164 KIF1BO60333 1816 aa11.81□□□□□ -0.52
SMARCC2-209ENST00000550164 METAP2P50579 478 aaKnown RBP eCLIP11.81□□□□□ -0.52
SMARCC2-209ENST00000550164 TOM1L2Q6ZVM7 507 aa11.81□□□□□ -0.52
SMARCC2-209ENST00000550164 ANKRD24Q8TF21 1146 aa11.81□□□□□ -0.52
SMARCC2-209ENST00000550164 MAP3K4Q9Y6R4 1608 aa11.81□□□□□ -0.52
SMARCC2-209ENST00000550164 IFIT3O14879 490 aaKnown RBP11.8□□□□□ -0.52
SMARCC2-209ENST00000550164 CYP2E1P05181 493 aaPredicted RBP11.8□□□□□ -0.52
SMARCC2-209ENST00000550164 NCOA7Q8NI08 942 aa11.8□□□□□ -0.52
SMARCC2-209ENST00000550164 WASF1Q92558 559 aa11.8□□□□□ -0.52
SMARCC2-209ENST00000550164 NAPBQ9H115 298 aa11.8□□□□□ -0.52
SMARCC2-209ENST00000550164 HSP90AB3PQ58FF7 597 aa11.8□□□□□ -0.52
SMARCC2-209ENST00000550164 ALG1Q9BT22 464 aa11.8□□□□□ -0.52
SMARCC2-209ENST00000550164 TRIM34Q9BYJ4 488 aa11.8□□□□□ -0.52
SMARCC2-209ENST00000550164 ZSWIM6Q9HCJ5 1215 aa11.8□□□□□ -0.52
SMARCC2-209ENST00000550164 ARFGAP3Q9NP61 516 aa11.8□□□□□ -0.52
SMARCC2-209ENST00000550164 SLC12A7Q9Y666 1083 aa11.8□□□□□ -0.52
SMARCC2-209ENST00000550164 A0A0D9SFI3 127 aa11.8□□□□□ -0.52
SMARCC2-209ENST00000550164 DDIT3P35638 169 aa11.8□□□□□ -0.52
SMARCC2-209ENST00000550164 MCM6Q14566 821 aa11.8□□□□□ -0.52
SMARCC2-209ENST00000550164 UTP14AQ9BVJ6 771 aaKnown RBP11.8□□□□□ -0.52
SMARCC2-209ENST00000550164 PAG1Q9NWQ8 432 aa11.8□□□□□ -0.52
SMARCC2-209ENST00000550164 BBXQ8WY36 941 aaPredicted RBP11.79□□□□□ -0.52
SMARCC2-209ENST00000550164 SUCLG2Q96I99 432 aa11.79□□□□□ -0.52
SMARCC2-209ENST00000550164 ZNF215Q9UL58 517 aaPredicted RBP11.79□□□□□ -0.52
SMARCC2-209ENST00000550164 MPHOSPH8Q99549 860 aa11.79□□□□□ -0.52
SMARCC2-209ENST00000550164 DBNDD2Q9BQY9 259 aa11.79□□□□□ -0.52
SMARCC2-209ENST00000550164 SLC26A6Q9BXS9 759 aa11.79□□□□□ -0.52
SMARCC2-209ENST00000550164 RNF216Q9NWF9 866 aaPredicted RBP11.79□□□□□ -0.52
SMARCC2-209ENST00000550164 KCNQ3O43525 872 aa11.79□□□□□ -0.52
SMARCC2-209ENST00000550164 PRC1O43663 620 aa11.79□□□□□ -0.52
SMARCC2-209ENST00000550164 RAD21O60216 631 aa11.79□□□□□ -0.52
SMARCC2-209ENST00000550164 EAF2Q96CJ1 260 aaPredicted RBP11.79□□□□□ -0.52
SMARCC2-209ENST00000550164 MRVI1Q9Y6F6 885 aa11.79□□□□□ -0.52
SMARCC2-209ENST00000550164 MINDY4BA8MYZ0 360 aa11.79□□□□□ -0.52
SMARCC2-209ENST00000550164 TIMM10P62072 90 aa11.79□□□□□ -0.52
SMARCC2-209ENST00000550164 IFIT5Q13325 482 aaKnown RBP11.79□□□□□ -0.52
SMARCC2-209ENST00000550164 SBNO1A3KN83 1393 aa11.78□□□□□ -0.52
SMARCC2-209ENST00000550164 SSRP1Q08945 709 aaKnown RBP11.78□□□□□ -0.52
SMARCC2-209ENST00000550164 TMEM67Q5HYA8 995 aa11.78□□□□□ -0.52
SMARCC2-209ENST00000550164 KIAA1328Q86T90 577 aa11.78□□□□□ -0.52
SMARCC2-209ENST00000550164 RAI14Q9P0K7 980 aa11.78□□□□□ -0.52
SMARCC2-209ENST00000550164 SNRPA1P09661 255 aaKnown RBP11.78□□□□□ -0.52
SMARCC2-209ENST00000550164 RXRAP19793 462 aa11.78□□□□□ -0.52
SMARCC2-209ENST00000550164 KARSQ15046 597 aaKnown RBP11.78□□□□□ -0.52
SMARCC2-209ENST00000550164 LRP2BPQ9P2M1 347 aa11.78□□□□□ -0.52
SMARCC2-209ENST00000550164 ABCF2Q9UG63 623 aa11.78□□□□□ -0.52
SMARCC2-209ENST00000550164 CEP131Q9UPN4 1083 aa11.78□□□□□ -0.52
SMARCC2-209ENST00000550164 TNRQ92752 1358 aa11.78□□□□□ -0.52
SMARCC2-209ENST00000550164 A0A087WWV3 80 aa11.78□□□□□ -0.52
SMARCC2-209ENST00000550164 GOLGA6L9A6NEM1 432 aa11.78□□□□□ -0.52
SMARCC2-209ENST00000550164 EIF5P55010 431 aaKnown RBP11.78□□□□□ -0.52
SMARCC2-209ENST00000550164 ANKLE2Q86XL3 938 aa11.78□□□□□ -0.52
SMARCC2-209ENST00000550164 AMOTL1Q8IY63 956 aa11.78□□□□□ -0.52
SMARCC2-209ENST00000550164 CWC25Q9NXE8 425 aaPredicted RBP11.78□□□□□ -0.52
SMARCC2-209ENST00000550164 LAMC1P11047 1609 aa11.77□□□□□ -0.52
SMARCC2-209ENST00000550164 NUP88Q99567 741 aaPredicted RBP11.77□□□□□ -0.52
SMARCC2-209ENST00000550164 CRACR2AQ9BSW2 395 aa11.77□□□□□ -0.52
SMARCC2-209ENST00000550164 GBP3Q9H0R5 595 aa11.77□□□□□ -0.52
SMARCC2-209ENST00000550164 DEF6Q9H4E7 631 aa11.77□□□□□ -0.52
SMARCC2-209ENST00000550164 STIM1Q13586 685 aa11.77□□□□□ -0.53
SMARCC2-209ENST00000550164 NFATC2IPQ8NCF5 419 aa11.77□□□□□ -0.53
SMARCC2-209ENST00000550164 CDC42BPBQ9Y5S2 1711 aa11.77□□□□□ -0.53
SMARCC2-209ENST00000550164 EIF4A1P60842 406 aaKnown RBP11.77□□□□□ -0.53
SMARCC2-209ENST00000550164 CACTINQ8WUQ7 758 aaKnown RBP11.77□□□□□ -0.53
SMARCC2-209ENST00000550164 TSPYL1Q9H0U9 437 aa11.77□□□□□ -0.53
SMARCC2-209ENST00000550164 DDX21Q9NR30 783 aaKnown RBP eCLIP11.77□□□□□ -0.53
SMARCC2-209ENST00000550164 E9PCH4 1651 aa11.77□□□□□ -0.53
SMARCC2-209ENST00000550164 CCDC181Q5TID7 509 aa11.76□□□□□ -0.53
SMARCC2-209ENST00000550164 TET3O43151 1660 aa11.76□□□□□ -0.53
SMARCC2-209ENST00000550164 GPTP24298 496 aa11.76□□□□□ -0.53
SMARCC2-209ENST00000550164 GABPB1Q06547 395 aaPredicted RBP11.76□□□□□ -0.53
SMARCC2-209ENST00000550164 DMTNQ08495 405 aa11.76□□□□□ -0.53
SMARCC2-209ENST00000550164 LDHAL6AQ6ZMR3 332 aa11.76□□□□□ -0.53
SMARCC2-209ENST00000550164 CCDC148Q8NFR7 591 aa11.76□□□□□ -0.53
SMARCC2-209ENST00000550164 USP28Q96RU2 1077 aa11.76□□□□□ -0.53
SMARCC2-209ENST00000550164 SEC62Q99442 399 aaKnown RBP11.76□□□□□ -0.53
SMARCC2-209ENST00000550164 PRDM11Q9NQV5 511 aa11.76□□□□□ -0.53
SMARCC2-209ENST00000550164 NLRP1Q9C000 1473 aa11.76□□□□□ -0.53
SMARCC2-209ENST00000550164 ZFYVE16Q7Z3T8 1539 aa11.76□□□□□ -0.53
SMARCC2-209ENST00000550164 RNMTO43148 476 aaKnown RBP11.76□□□□□ -0.53
SMARCC2-209ENST00000550164 AFMP43652 599 aa11.76□□□□□ -0.53
SMARCC2-209ENST00000550164 BEND3Q5T5X7 828 aa11.76□□□□□ -0.53
SMARCC2-209ENST00000550164 LZTFL1Q9NQ48 299 aa11.76□□□□□ -0.53
SMARCC2-209ENST00000550164 AATKQ6ZMQ8 1374 aa11.76□□□□□ -0.53
SMARCC2-209ENST00000550164 PATL2C9JE40 543 aaKnown RBP11.75□□□□□ -0.53
SMARCC2-209ENST00000550164 ZBTB43O43298 467 aa11.75□□□□□ -0.53
SMARCC2-209ENST00000550164 EVCP57679 992 aa11.75□□□□□ -0.53
SMARCC2-209ENST00000550164 ERCC6LQ2NKX8 1250 aa11.75□□□□□ -0.53
SMARCC2-209ENST00000550164 TNNI3KQ59H18 835 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms