RNA–Protein interactions for RNA: ENST00000550136.1

PTCH1-220, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 2,388 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-220ENST00000550136 SPATA31A7Q8IWB4 1347 aa10.96□□□□□ -0.65
PTCH1-220ENST00000550136 TECPR2O15040 1411 aa10.96□□□□□ -0.65
PTCH1-220ENST00000550136 MBD3O95983 291 aa10.96□□□□□ -0.66
PTCH1-220ENST00000550136 NEDD9Q14511 834 aa10.96□□□□□ -0.66
PTCH1-220ENST00000550136 GBP6Q6ZN66 633 aa10.96□□□□□ -0.66
PTCH1-220ENST00000550136 DRAXINQ8NBI3 349 aaPredicted RBP10.96□□□□□ -0.66
PTCH1-220ENST00000550136 TMX4Q9H1E5 349 aaPredicted RBP10.96□□□□□ -0.66
PTCH1-220ENST00000550136 RPGRIP1LQ68CZ1 1315 aa10.96□□□□□ -0.66
PTCH1-220ENST00000550136 POLR3GO15318 223 aaPredicted RBP10.95□□□□□ -0.66
PTCH1-220ENST00000550136 APBA3O96018 575 aa10.95□□□□□ -0.66
PTCH1-220ENST00000550136 CLCN6P51797 869 aa10.95□□□□□ -0.66
PTCH1-220ENST00000550136 CRYMQ14894 314 aa10.95□□□□□ -0.66
PTCH1-220ENST00000550136 RBBP5Q15291 538 aaKnown RBP10.95□□□□□ -0.66
PTCH1-220ENST00000550136 TTLL5Q6EMB2 1281 aa10.95□□□□□ -0.66
PTCH1-220ENST00000550136 TADA2BQ86TJ2 420 aa10.95□□□□□ -0.66
PTCH1-220ENST00000550136 RPUSD2Q8IZ73 545 aaKnown RBP10.95□□□□□ -0.66
PTCH1-220ENST00000550136 RTF1Q92541 710 aaKnown RBP10.95□□□□□ -0.66
PTCH1-220ENST00000550136 KCNB2Q92953 911 aa10.95□□□□□ -0.66
PTCH1-220ENST00000550136 ZNF396Q96N95 335 aaPredicted RBP10.95□□□□□ -0.66
PTCH1-220ENST00000550136 MMTAG2Q9BU76 263 aaKnown RBP10.95□□□□□ -0.66
PTCH1-220ENST00000550136 USP25Q9UHP3 1055 aa10.95□□□□□ -0.66
PTCH1-220ENST00000550136 K7ELQ4 463 aaPredicted RBP10.95□□□□□ -0.66
PTCH1-220ENST00000550136 TRIM37O94972 964 aa10.95□□□□□ -0.66
PTCH1-220ENST00000550136 ELF2Q15723 593 aa10.95□□□□□ -0.66
PTCH1-220ENST00000550136 NFXL1Q6ZNB6 911 aa10.95□□□□□ -0.66
PTCH1-220ENST00000550136 CYP2E1P05181 493 aaPredicted RBP10.94□□□□□ -0.66
PTCH1-220ENST00000550136 CHMLP26374 656 aa10.94□□□□□ -0.66
PTCH1-220ENST00000550136 REXO1L1PQ8IX06 675 aa10.94□□□□□ -0.66
PTCH1-220ENST00000550136 ATL2Q8NHH9 583 aa10.94□□□□□ -0.66
PTCH1-220ENST00000550136 SRRTQ9BXP5 876 aaKnown RBP10.94□□□□□ -0.66
PTCH1-220ENST00000550136 GOPCQ9HD26 462 aa10.94□□□□□ -0.66
PTCH1-220ENST00000550136 BTG4Q9NY30 223 aa10.94□□□□□ -0.66
PTCH1-220ENST00000550136 ZNF215Q9UL58 517 aaPredicted RBP10.94□□□□□ -0.66
PTCH1-220ENST00000550136 EXOC6BQ9Y2D4 811 aa10.94□□□□□ -0.66
PTCH1-220ENST00000550136 NUTM2FA1L443 756 aa10.94□□□□□ -0.66
PTCH1-220ENST00000550136 ATP8B1O43520 1251 aa10.94□□□□□ -0.66
PTCH1-220ENST00000550136 SNUPNO95149 360 aaKnown RBP10.94□□□□□ -0.66
PTCH1-220ENST00000550136 NCAPG2Q86XI2 1143 aa10.94□□□□□ -0.66
PTCH1-220ENST00000550136 ERC1Q8IUD2 1116 aa10.94□□□□□ -0.66
PTCH1-220ENST00000550136 ARMC2Q8NEN0 867 aa10.94□□□□□ -0.66
PTCH1-220ENST00000550136 A0A087WUV0 522 aaPredicted RBP10.93□□□□□ -0.66
PTCH1-220ENST00000550136 TPD52L2O43399 206 aaKnown RBP10.93□□□□□ -0.66
PTCH1-220ENST00000550136 PRPF40AO75400 957 aaKnown RBP10.93□□□□□ -0.66
PTCH1-220ENST00000550136 IMPDH2P12268 514 aa10.93□□□□□ -0.66
PTCH1-220ENST00000550136 BAG1Q99933 345 aaPredicted RBP10.93□□□□□ -0.66
PTCH1-220ENST00000550136 SLX1AQ9BQ83 275 aa10.93□□□□□ -0.66
PTCH1-220ENST00000550136 RMI1Q9H9A7 625 aa10.93□□□□□ -0.66
PTCH1-220ENST00000550136 MCM8Q9UJA3 840 aa10.93□□□□□ -0.66
PTCH1-220ENST00000550136 ZRANB2O95218 330 aaKnown RBP eCLIP10.92□□□□□ -0.66
PTCH1-220ENST00000550136 CCNHP51946 323 aaPredicted RBP10.92□□□□□ -0.66
PTCH1-220ENST00000550136 C16orf45Q96MC5 204 aaPredicted RBP10.92□□□□□ -0.66
PTCH1-220ENST00000550136 BLOC1S6Q9UL45 172 aa10.92□□□□□ -0.66
PTCH1-220ENST00000550136 KNDC1Q76NI1 1749 aa10.92□□□□□ -0.66
PTCH1-220ENST00000550136 NRXN1Q9ULB1 1477 aa10.92□□□□□ -0.66
PTCH1-220ENST00000550136 AK9Q5TCS8 1911 aa10.92□□□□□ -0.66
PTCH1-220ENST00000550136 PAX3P23760 479 aa10.92□□□□□ -0.66
PTCH1-220ENST00000550136 ANKRD45Q5TZF3 282 aa10.92□□□□□ -0.66
PTCH1-220ENST00000550136 SYAP1Q96A49 352 aaPredicted RBP10.92□□□□□ -0.66
PTCH1-220ENST00000550136 MKRN1Q9UHC7 482 aaKnown RBP10.92□□□□□ -0.66
PTCH1-220ENST00000550136 PPLO60437 1756 aa10.92□□□□□ -0.66
PTCH1-220ENST00000550136 ERBB3P21860 1342 aa10.92□□□□□ -0.66
PTCH1-220ENST00000550136 MICAL1Q8TDZ2 1067 aa10.91□□□□□ -0.66
PTCH1-220ENST00000550136 LARP6Q9BRS8 491 aaKnown RBP10.91□□□□□ -0.66
PTCH1-220ENST00000550136 CRACR2AQ9BSW2 395 aa10.91□□□□□ -0.66
PTCH1-220ENST00000550136 TMCO5BA8MYB1 307 aa10.91□□□□□ -0.66
PTCH1-220ENST00000550136 AP1G2O75843 785 aa10.91□□□□□ -0.66
PTCH1-220ENST00000550136 CDKL5O76039 1030 aa10.91□□□□□ -0.66
PTCH1-220ENST00000550136 HNRNPH1P31943 449 aaKnown RBP10.91□□□□□ -0.66
PTCH1-220ENST00000550136 PRPHP41219 470 aa10.91□□□□□ -0.66
PTCH1-220ENST00000550136 GOLGA2Q08379 1002 aa10.91□□□□□ -0.66
PTCH1-220ENST00000550136 CTCFLQ8NI51 663 aaPredicted RBP10.91□□□□□ -0.66
PTCH1-220ENST00000550136 PMFBP1Q8TBY8 1022 aa10.91□□□□□ -0.66
PTCH1-220ENST00000550136 CLUAP1Q96AJ1 413 aa10.91□□□□□ -0.66
PTCH1-220ENST00000550136 CREBZFQ9NS37 354 aa10.91□□□□□ -0.66
PTCH1-220ENST00000550136 PDRG1Q9NUG6 133 aa10.91□□□□□ -0.66
PTCH1-220ENST00000550136 ABCC11Q96J66 1382 aa10.91□□□□□ -0.66
PTCH1-220ENST00000550136 RTN2O75298 545 aa10.9□□□□□ -0.66
PTCH1-220ENST00000550136 OATP04181 439 aa10.9□□□□□ -0.66
PTCH1-220ENST00000550136 OAS2P29728 719 aaKnown RBP10.9□□□□□ -0.66
PTCH1-220ENST00000550136 LMAN1P49257 510 aa10.9□□□□□ -0.66
PTCH1-220ENST00000550136 PDIA5Q14554 519 aa10.9□□□□□ -0.66
PTCH1-220ENST00000550136 CDC37Q16543 378 aaPredicted RBP10.9□□□□□ -0.66
PTCH1-220ENST00000550136 CPLX2Q6PUV4 134 aaKnown RBP10.9□□□□□ -0.66
PTCH1-220ENST00000550136 LRRC31Q6UY01 552 aa10.9□□□□□ -0.66
PTCH1-220ENST00000550136 WAPLQ7Z5K2 1190 aa10.9□□□□□ -0.66
PTCH1-220ENST00000550136 LZTS2Q9BRK4 669 aa10.9□□□□□ -0.66
PTCH1-220ENST00000550136 FAM107BQ9H098 131 aa10.9□□□□□ -0.66
PTCH1-220ENST00000550136 SUN2Q9UH99 717 aa10.9□□□□□ -0.66
PTCH1-220ENST00000550136 NRKQ7Z2Y5 1582 aa10.9□□□□□ -0.66
PTCH1-220ENST00000550136 CHD4Q14839 1912 aa10.9□□□□□ -0.66
PTCH1-220ENST00000550136 PECAM1P16284 738 aaPredicted RBP10.9□□□□□ -0.66
PTCH1-220ENST00000550136 NAP1L1P55209 391 aaKnown RBP10.9□□□□□ -0.66
PTCH1-220ENST00000550136 MFSD4BQ5TF39 518 aa10.9□□□□□ -0.66
PTCH1-220ENST00000550136 DZIP3Q86Y13 1208 aaKnown RBP10.9□□□□□ -0.66
PTCH1-220ENST00000550136 RBM12BQ8IXT5 1001 aaKnown RBP10.9□□□□□ -0.66
PTCH1-220ENST00000550136 MICALL1Q8N3F8 863 aa10.9□□□□□ -0.66
PTCH1-220ENST00000550136 GAS2L2Q8NHY3 880 aa10.9□□□□□ -0.66
PTCH1-220ENST00000550136 N4BP2L2Q92802 583 aaPredicted RBP10.9□□□□□ -0.66
PTCH1-220ENST00000550136 IFT172Q9UG01 1749 aa10.9□□□□□ -0.67
PTCH1-220ENST00000550136 CASZ1Q86V15 1759 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms