RNA–Protein interactions for RNA: ENST00000549766.5

TGFBR1-207, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 5

Gene TGFBR1, Length 1,678 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-207ENST00000549766 SNRKQ9NRH2 765 aa29.78■■■□□ 2.36
TGFBR1-207ENST00000549766 MROH5Q6ZUA9 1318 aa29.77■■■□□ 2.36
TGFBR1-207ENST00000549766 PHF14O94880 888 aa29.77■■■□□ 2.36
TGFBR1-207ENST00000549766 PDE8BO95263 885 aa29.77■■■□□ 2.36
TGFBR1-207ENST00000549766 XAGE2Q96GT9 111 aa29.77■■■□□ 2.36
TGFBR1-207ENST00000549766 ABCC12Q96J65 1359 aa29.77■■■□□ 2.36
TGFBR1-207ENST00000549766 SSFA2P28290 1259 aa29.76■■■□□ 2.36
TGFBR1-207ENST00000549766 EDC3Q96F86 508 aaKnown RBP29.76■■■□□ 2.36
TGFBR1-207ENST00000549766 FSD1Q9BTV5 496 aa29.76■■■□□ 2.36
TGFBR1-207ENST00000549766 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.76■■■□□ 2.35
TGFBR1-207ENST00000549766 RABEP1Q15276 862 aa29.76■■■□□ 2.35
TGFBR1-207ENST00000549766 ATP2B3Q16720 1220 aa29.76■■■□□ 2.35
TGFBR1-207ENST00000549766 TICAM2Q86XR7 235 aa29.76■■■□□ 2.35
TGFBR1-207ENST00000549766 LSG1Q9H089 658 aaKnown RBP29.76■■■□□ 2.35
TGFBR1-207ENST00000549766 ADORA1P30542 326 aa29.75■■■□□ 2.35
TGFBR1-207ENST00000549766 C3orf67Q6ZVT6 689 aa29.75■■■□□ 2.35
TGFBR1-207ENST00000549766 RAD50Q92878 1312 aa29.75■■■□□ 2.35
TGFBR1-207ENST00000549766 NBPF5PQ86XG9 351 aaPredicted RBP29.74■■■□□ 2.35
TGFBR1-207ENST00000549766 CCDC158Q5M9N0 1113 aa29.73■■■□□ 2.35
TGFBR1-207ENST00000549766 TPTE2Q6XPS3 522 aa29.73■■■□□ 2.35
TGFBR1-207ENST00000549766 DNAJC2Q99543 621 aaKnown RBP29.73■■■□□ 2.35
TGFBR1-207ENST00000549766 MPHOSPH8Q99549 860 aa29.73■■■□□ 2.35
TGFBR1-207ENST00000549766 SPEF2Q9C093 1822 aa29.73■■■□□ 2.35
TGFBR1-207ENST00000549766 FGFR2P21802 821 aa29.72■■■□□ 2.35
TGFBR1-207ENST00000549766 ANAPC15P60006 121 aa29.72■■■□□ 2.35
TGFBR1-207ENST00000549766 NDUFB9Q9Y6M9 179 aa29.72■■■□□ 2.35
TGFBR1-207ENST00000549766 IFIT1P09914 478 aaKnown RBP29.72■■■□□ 2.35
TGFBR1-207ENST00000549766 MCCP23508 829 aa29.72■■■□□ 2.35
TGFBR1-207ENST00000549766 IGHMBP2P38935 993 aaKnown RBP29.72■■■□□ 2.35
TGFBR1-207ENST00000549766 NMIQ13287 307 aaPredicted RBP29.72■■■□□ 2.35
TGFBR1-207ENST00000549766 KBTBD3Q8NAB2 608 aa29.72■■■□□ 2.35
TGFBR1-207ENST00000549766 GTF2E1P29083 439 aaPredicted RBP29.71■■■□□ 2.35
TGFBR1-207ENST00000549766 HSPA4P34932 840 aa29.71■■■□□ 2.35
TGFBR1-207ENST00000549766 HSCBQ8IWL3 235 aa29.71■■■□□ 2.35
TGFBR1-207ENST00000549766 ZNF512BQ96KM6 892 aaPredicted RBP29.71■■■□□ 2.35
TGFBR1-207ENST00000549766 FAM227BQ96M60 508 aa29.71■■■□□ 2.35
TGFBR1-207ENST00000549766 CDC5LQ99459 802 aaKnown RBP29.71■■■□□ 2.35
TGFBR1-207ENST00000549766 PAG1Q9NWQ8 432 aa29.71■■■□□ 2.35
TGFBR1-207ENST00000549766 CARMIL3Q8ND23 1372 aa29.71■■■□□ 2.35
TGFBR1-207ENST00000549766 CASZ1Q86V15 1759 aa29.71■■■□□ 2.35
TGFBR1-207ENST00000549766 NFIXQ14938 502 aa29.7■■■□□ 2.35
TGFBR1-207ENST00000549766 PUM3Q15397 648 aaKnown RBP29.7■■■□□ 2.35
TGFBR1-207ENST00000549766 COL4A1P02462 1669 aa29.7■■■□□ 2.35
TGFBR1-207ENST00000549766 MED23Q9ULK4 1368 aa29.69■■■□□ 2.34
TGFBR1-207ENST00000549766 A0A0D9SFI3 127 aa29.69■■■□□ 2.34
TGFBR1-207ENST00000549766 TTC39AQ5SRH9 613 aa29.69■■■□□ 2.34
TGFBR1-207ENST00000549766 KIAA1211Q6ZU35 1233 aa29.69■■■□□ 2.34
TGFBR1-207ENST00000549766 LPIN2Q92539 896 aa29.69■■■□□ 2.34
TGFBR1-207ENST00000549766 ARAP2Q8WZ64 1704 aa29.68■■■□□ 2.34
TGFBR1-207ENST00000549766 CD2BP2O95400 341 aaKnown RBP29.68■■■□□ 2.34
TGFBR1-207ENST00000549766 GYS1P13807 737 aa29.68■■■□□ 2.34
TGFBR1-207ENST00000549766 GORABQ5T7V8 394 aa29.68■■■□□ 2.34
TGFBR1-207ENST00000549766 DDX46Q7L014 1031 aaKnown RBP29.68■■■□□ 2.34
TGFBR1-207ENST00000549766 PALD1Q9ULE6 856 aa29.68■■■□□ 2.34
TGFBR1-207ENST00000549766 APBA3O96018 575 aa29.67■■■□□ 2.34
TGFBR1-207ENST00000549766 NLRP3Q96P20 1036 aa29.67■■■□□ 2.34
TGFBR1-207ENST00000549766 GOLIM4O00461 696 aa29.66■■■□□ 2.34
TGFBR1-207ENST00000549766 ANKRD18AQ8IVF6 992 aa29.65■■■□□ 2.34
TGFBR1-207ENST00000549766 HELBQ8NG08 1087 aaPredicted RBP29.65■■■□□ 2.34
TGFBR1-207ENST00000549766 BSDC1Q9NW68 430 aaPredicted RBP29.65■■■□□ 2.34
TGFBR1-207ENST00000549766 CCDC171Q6TFL3 1326 aa29.64■■■□□ 2.34
TGFBR1-207ENST00000549766 PTH1RQ03431 593 aa29.64■■■□□ 2.34
TGFBR1-207ENST00000549766 AKT1S1Q96B36 256 aa29.64■■■□□ 2.34
TGFBR1-207ENST00000549766 TNS1Q9HBL0 1735 aaKnown RBP29.64■■■□□ 2.34
TGFBR1-207ENST00000549766 CHRNDQ07001 517 aa29.63■■■□□ 2.33
TGFBR1-207ENST00000549766 SCARF1Q14162 830 aa29.63■■■□□ 2.33
TGFBR1-207ENST00000549766 TM4SF1P30408 202 aa29.63■■■□□ 2.33
TGFBR1-207ENST00000549766 RGPD3A6NKT7 1758 aaPredicted RBP29.62■■■□□ 2.33
TGFBR1-207ENST00000549766 RGPD4Q7Z3J3 1758 aa29.62■■■□□ 2.33
TGFBR1-207ENST00000549766 SLC5A1P13866 664 aa29.62■■■□□ 2.33
TGFBR1-207ENST00000549766 ARID4AP29374 1257 aaPredicted RBP29.62■■■□□ 2.33
TGFBR1-207ENST00000549766 MAP4K1Q92918 833 aa29.62■■■□□ 2.33
TGFBR1-207ENST00000549766 KCNB2Q92953 911 aa29.62■■■□□ 2.33
TGFBR1-207ENST00000549766 ANTXR1Q9H6X2 564 aa29.62■■■□□ 2.33
TGFBR1-207ENST00000549766 K7ELQ4 463 aaPredicted RBP29.61■■■□□ 2.33
TGFBR1-207ENST00000549766 TAF5LO75529 589 aa29.61■■■□□ 2.33
TGFBR1-207ENST00000549766 ZNF827Q17R98 1081 aa29.61■■■□□ 2.33
TGFBR1-207ENST00000549766 CCDC102BQ68D86 513 aa29.61■■■□□ 2.33
TGFBR1-207ENST00000549766 MCAMP43121 646 aa29.6■■■□□ 2.33
TGFBR1-207ENST00000549766 ZNF589Q86UQ0 364 aaPredicted RBP29.6■■■□□ 2.33
TGFBR1-207ENST00000549766 IL27Q8NEV9 243 aa29.6■■■□□ 2.33
TGFBR1-207ENST00000549766 CELF1Q92879 486 aaKnown RBP29.6■■■□□ 2.33
TGFBR1-207ENST00000549766 TNRC6CQ9HCJ0 1690 aaKnown RBP29.6■■■□□ 2.33
TGFBR1-207ENST00000549766 CNBD1Q8NA66 436 aa29.6■■■□□ 2.33
TGFBR1-207ENST00000549766 AKAP11Q9UKA4 1901 aa29.59■■■□□ 2.33
TGFBR1-207ENST00000549766 ST18O60284 1047 aa29.59■■■□□ 2.33
TGFBR1-207ENST00000549766 CHGBP05060 677 aa29.59■■■□□ 2.33
TGFBR1-207ENST00000549766 ZAP70P43403 619 aa29.59■■■□□ 2.33
TGFBR1-207ENST00000549766 PHKA1P46020 1223 aa29.59■■■□□ 2.33
TGFBR1-207ENST00000549766 FKBP4Q02790 459 aaKnown RBP eCLIP29.59■■■□□ 2.33
TGFBR1-207ENST00000549766 NECTIN1Q15223 517 aa29.59■■■□□ 2.33
TGFBR1-207ENST00000549766 MCMDC2Q4G0Z9 681 aa29.59■■■□□ 2.33
TGFBR1-207ENST00000549766 CCDC24Q8N4L8 307 aa29.59■■■□□ 2.33
TGFBR1-207ENST00000549766 A0A1B0GUL6 1792 aa29.59■■■□□ 2.33
TGFBR1-207ENST00000549766 UQCRFS1P1P0C7P4 283 aa29.58■■■□□ 2.33
TGFBR1-207ENST00000549766 HELLSQ9NRZ9 838 aa29.58■■■□□ 2.33
TGFBR1-207ENST00000549766 SNX14Q9Y5W7 946 aa29.58■■■□□ 2.33
TGFBR1-207ENST00000549766 RPS8P62241 208 aaKnown RBP29.57■■■□□ 2.32
TGFBR1-207ENST00000549766 ZMYM1Q5SVZ6 1142 aa29.57■■■□□ 2.32
TGFBR1-207ENST00000549766 PRR5LQ6MZQ0 368 aa29.57■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms