RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 IMPACTQ9P2X3 320 aa27.05■■□□□ 1.92
NPAS3-206ENST00000548645 AMOTL2Q9Y2J4 779 aa27.05■■□□□ 1.92
NPAS3-206ENST00000548645 LTKP29376 864 aa27.05■■□□□ 1.92
NPAS3-206ENST00000548645 KAZALD1Q96I82 304 aa27.05■■□□□ 1.92
NPAS3-206ENST00000548645 ZNF396Q96N95 335 aaPredicted RBP27.05■■□□□ 1.92
NPAS3-206ENST00000548645 SLC26A8Q96RN1 970 aa27.05■■□□□ 1.92
NPAS3-206ENST00000548645 U3KPZ7 1027 aaPredicted RBP27.05■■□□□ 1.92
NPAS3-206ENST00000548645 UTYO14607 1347 aa27.05■■□□□ 1.92
NPAS3-206ENST00000548645 OSBPL5Q9H0X9 879 aaPredicted RBP27.04■■□□□ 1.92
NPAS3-206ENST00000548645 SCRN1Q12765 414 aa27.03■■□□□ 1.92
NPAS3-206ENST00000548645 CREBRFQ8IUR6 639 aa27.03■■□□□ 1.92
NPAS3-206ENST00000548645 ENGASEQ8NFI3 743 aa27.03■■□□□ 1.92
NPAS3-206ENST00000548645 SIL1Q9H173 461 aa27.03■■□□□ 1.92
NPAS3-206ENST00000548645 FGD1P98174 961 aa27.03■■□□□ 1.92
NPAS3-206ENST00000548645 AOPEPQ8N6M6 819 aa27.03■■□□□ 1.92
NPAS3-206ENST00000548645 ABTB2Q8N961 1025 aa27.03■■□□□ 1.92
NPAS3-206ENST00000548645 SLIT1O75093 1534 aa27.03■■□□□ 1.92
NPAS3-206ENST00000548645 DIP2AQ14689 1571 aa27.03■■□□□ 1.92
NPAS3-206ENST00000548645 RGPD8O14715 1765 aaPredicted RBP27.02■■□□□ 1.92
NPAS3-206ENST00000548645 PFKFB2O60825 505 aa27.02■■□□□ 1.92
NPAS3-206ENST00000548645 PROSER3Q2NL68 480 aa27.02■■□□□ 1.92
NPAS3-206ENST00000548645 L2HGDHQ9H9P8 463 aa27.01■■□□□ 1.91
NPAS3-206ENST00000548645 ERBB3P21860 1342 aa27.01■■□□□ 1.91
NPAS3-206ENST00000548645 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP27.01■■□□□ 1.91
NPAS3-206ENST00000548645 AKAP4Q5JQC9 854 aa27.01■■□□□ 1.91
NPAS3-206ENST00000548645 FSIP1Q8NA03 581 aa27.01■■□□□ 1.91
NPAS3-206ENST00000548645 USP28Q96RU2 1077 aa27.01■■□□□ 1.91
NPAS3-206ENST00000548645 DDX58O95786 925 aaKnown RBP27■■□□□ 1.91
NPAS3-206ENST00000548645 BMS1Q14692 1282 aaKnown RBP27■■□□□ 1.91
NPAS3-206ENST00000548645 FTOQ9C0B1 505 aaKnown RBP eCLIP27■■□□□ 1.91
NPAS3-206ENST00000548645 NSUN7Q8NE18 718 aaKnown RBP27■■□□□ 1.91
NPAS3-206ENST00000548645 DHX8Q14562 1220 aaKnown RBP27■■□□□ 1.91
NPAS3-206ENST00000548645 CCDC150Q8NCX0 1101 aa27■■□□□ 1.91
NPAS3-206ENST00000548645 TUBB4AP04350 444 aa26.99■■□□□ 1.91
NPAS3-206ENST00000548645 ME1P48163 572 aa26.99■■□□□ 1.91
NPAS3-206ENST00000548645 EDC3Q96F86 508 aaKnown RBP26.99■■□□□ 1.91
NPAS3-206ENST00000548645 HMGB1P09429 215 aaKnown RBP26.99■■□□□ 1.91
NPAS3-206ENST00000548645 ZNF530Q6P9A1 599 aaPredicted RBP26.99■■□□□ 1.91
NPAS3-206ENST00000548645 COL15A1P39059 1388 aa26.98■■□□□ 1.91
NPAS3-206ENST00000548645 CYP21A2P08686 494 aa26.98■■□□□ 1.91
NPAS3-206ENST00000548645 ATP5JP18859 108 aa26.98■■□□□ 1.91
NPAS3-206ENST00000548645 NBPF6Q5VWK0 638 aa26.98■■□□□ 1.91
NPAS3-206ENST00000548645 NBPF11Q86T75 865 aa26.98■■□□□ 1.91
NPAS3-206ENST00000548645 NBPF4Q96M43 638 aa26.98■■□□□ 1.91
NPAS3-206ENST00000548645 MARF1Q9Y4F3 1742 aaKnown RBP26.98■■□□□ 1.91
NPAS3-206ENST00000548645 A0A087WWV3 80 aa26.98■■□□□ 1.91
NPAS3-206ENST00000548645 PSDA5PKW4 1024 aaPredicted RBP26.98■■□□□ 1.91
NPAS3-206ENST00000548645 NRDCO43847 1150 aa26.98■■□□□ 1.91
NPAS3-206ENST00000548645 H2AFXP16104 143 aaPredicted RBP26.98■■□□□ 1.91
NPAS3-206ENST00000548645 ZNF446Q9NWS9 450 aa26.98■■□□□ 1.91
NPAS3-206ENST00000548645 E4F1Q66K89 784 aaPredicted RBP26.97■■□□□ 1.91
NPAS3-206ENST00000548645 MPRIPQ6WCQ1 1025 aa26.97■■□□□ 1.91
NPAS3-206ENST00000548645 IP6K1Q92551 441 aa26.97■■□□□ 1.91
NPAS3-206ENST00000548645 RFX7Q2KHR2 1363 aa26.97■■□□□ 1.91
NPAS3-206ENST00000548645 KCNJ6P48051 423 aa26.97■■□□□ 1.91
NPAS3-206ENST00000548645 MYH15Q9Y2K3 1946 aa26.97■■□□□ 1.91
NPAS3-206ENST00000548645 NCAPD2Q15021 1401 aa26.97■■□□□ 1.91
NPAS3-206ENST00000548645 PTPDC1A2A3K4 754 aa26.96■■□□□ 1.91
NPAS3-206ENST00000548645 FOSBP53539 338 aa26.96■■□□□ 1.91
NPAS3-206ENST00000548645 ZRSR1Q15695 479 aaKnown RBP26.96■■□□□ 1.91
NPAS3-206ENST00000548645 SDF4Q9BRK5 362 aa26.96■■□□□ 1.91
NPAS3-206ENST00000548645 LRRC2Q9BYS8 371 aa26.96■■□□□ 1.91
NPAS3-206ENST00000548645 USP54Q70EL1 1684 aa26.96■■□□□ 1.91
NPAS3-206ENST00000548645 NPHP1O15259 732 aa26.96■■□□□ 1.91
NPAS3-206ENST00000548645 PPP1R13BQ96KQ4 1090 aa26.96■■□□□ 1.91
NPAS3-206ENST00000548645 MRPS27Q92552 414 aaKnown RBP26.96■■□□□ 1.91
NPAS3-206ENST00000548645 MRC1P22897 1456 aa26.95■■□□□ 1.91
NPAS3-206ENST00000548645 ERCC6LQ2NKX8 1250 aa26.95■■□□□ 1.91
NPAS3-206ENST00000548645 PLEKHO1Q53GL0 409 aaPredicted RBP26.95■■□□□ 1.91
NPAS3-206ENST00000548645 MCMDC2Q4G0Z9 681 aa26.95■■□□□ 1.9
NPAS3-206ENST00000548645 DHX32Q7L7V1 743 aaKnown RBP26.95■■□□□ 1.9
NPAS3-206ENST00000548645 KLHDC4Q8TBB5 520 aa26.95■■□□□ 1.9
NPAS3-206ENST00000548645 SFPQP23246 707 aaKnown RBP eCLIP26.94■■□□□ 1.9
NPAS3-206ENST00000548645 TIGD1Q96MW7 591 aa26.94■■□□□ 1.9
NPAS3-206ENST00000548645 BPIFA3Q9BQP9 254 aa26.94■■□□□ 1.9
NPAS3-206ENST00000548645 EID1Q9Y6B2 187 aa26.94■■□□□ 1.9
NPAS3-206ENST00000548645 ANKARQ7Z5J8 1434 aa26.94■■□□□ 1.9
NPAS3-206ENST00000548645 CTDNEP1O95476 244 aa26.94■■□□□ 1.9
NPAS3-206ENST00000548645 CCDC93Q567U6 631 aa26.94■■□□□ 1.9
NPAS3-206ENST00000548645 SYT10Q6XYQ8 523 aa26.94■■□□□ 1.9
NPAS3-206ENST00000548645 FMR1NBQ8N0W7 255 aaPredicted RBP26.94■■□□□ 1.9
NPAS3-206ENST00000548645 CALCOCO1Q9P1Z2 691 aa26.94■■□□□ 1.9
NPAS3-206ENST00000548645 CCDC129Q6ZRS4 1044 aa26.93■■□□□ 1.9
NPAS3-206ENST00000548645 FBXW7Q969H0 707 aa26.93■■□□□ 1.9
NPAS3-206ENST00000548645 NOL10Q9BSC4 688 aaKnown RBP26.93■■□□□ 1.9
NPAS3-206ENST00000548645 SMC2O95347 1197 aa26.93■■□□□ 1.9
NPAS3-206ENST00000548645 C14orf37Q86TY3 774 aa26.93■■□□□ 1.9
NPAS3-206ENST00000548645 ZNF609O15014 1411 aa26.93■■□□□ 1.9
NPAS3-206ENST00000548645 LMO7Q8WWI1 1683 aa26.93■■□□□ 1.9
NPAS3-206ENST00000548645 RNMTO43148 476 aaKnown RBP26.93■■□□□ 1.9
NPAS3-206ENST00000548645 TPM4P67936 248 aa26.93■■□□□ 1.9
NPAS3-206ENST00000548645 TMC6Q7Z403 805 aa26.93■■□□□ 1.9
NPAS3-206ENST00000548645 ERCC4Q92889 916 aaPredicted RBP26.93■■□□□ 1.9
NPAS3-206ENST00000548645 XPO4Q9C0E2 1151 aaKnown RBP26.93■■□□□ 1.9
NPAS3-206ENST00000548645 HEG1Q9ULI3 1381 aa26.92■■□□□ 1.9
NPAS3-206ENST00000548645 ADALQ6DHV7 355 aa26.92■■□□□ 1.9
NPAS3-206ENST00000548645 DBNLQ9UJU6 430 aaKnown RBP26.92■■□□□ 1.9
NPAS3-206ENST00000548645 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP26.92■■□□□ 1.9
NPAS3-206ENST00000548645 ARMCX5Q6P1M9 558 aa26.92■■□□□ 1.9
NPAS3-206ENST00000548645 DDX21Q9NR30 783 aaKnown RBP eCLIP26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms