RNA–Protein interactions for RNA: ENST00000548570.1

APP-217, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 361 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-217ENST00000548570 C4AP0C0L4 1744 aa6.34□□□□□ -1.39
APP-217ENST00000548570 SCN7AQ01118 1682 aa6.34□□□□□ -1.39
APP-217ENST00000548570 KLRG2A4D1S0 409 aaPredicted RBP6.34□□□□□ -1.39
APP-217ENST00000548570 FAM177BA6PVY3 158 aa6.34□□□□□ -1.39
APP-217ENST00000548570 GRM8O00222 908 aa6.34□□□□□ -1.39
APP-217ENST00000548570 IPO8O15397 1037 aaKnown RBP6.34□□□□□ -1.39
APP-217ENST00000548570 PCCAP05165 728 aaPredicted RBP6.34□□□□□ -1.39
APP-217ENST00000548570 HMGB2P26583 209 aaKnown RBP6.34□□□□□ -1.39
APP-217ENST00000548570 CCT4P50991 539 aaKnown RBP6.34□□□□□ -1.39
APP-217ENST00000548570 PTPN5P54829 565 aa6.34□□□□□ -1.39
APP-217ENST00000548570 FOXO4P98177 505 aa6.34□□□□□ -1.39
APP-217ENST00000548570 MVPQ14764 893 aaKnown RBP6.34□□□□□ -1.39
APP-217ENST00000548570 ERFEQ4G0M1 354 aa6.34□□□□□ -1.39
APP-217ENST00000548570 HSP90AB3PQ58FF7 597 aa6.34□□□□□ -1.39
APP-217ENST00000548570 RTL5Q5HYW3 569 aaPredicted RBP6.34□□□□□ -1.39
APP-217ENST00000548570 SLC10A5Q5PT55 438 aa6.34□□□□□ -1.39
APP-217ENST00000548570 ANKRD44Q8N8A2 993 aa6.34□□□□□ -1.39
APP-217ENST00000548570 CCDC191Q8NCU4 936 aa6.34□□□□□ -1.39
APP-217ENST00000548570 EXOC6Q8TAG9 804 aa6.34□□□□□ -1.39
APP-217ENST00000548570 FAM89AQ96GI7 184 aa6.34□□□□□ -1.39
APP-217ENST00000548570 SUCLG2Q96I99 432 aa6.34□□□□□ -1.39
APP-217ENST00000548570 IRX2Q9BZI1 471 aaPredicted RBP6.34□□□□□ -1.39
APP-217ENST00000548570 SRCIN1Q9C0H9 1055 aa6.34□□□□□ -1.39
APP-217ENST00000548570 GPHNQ9NQX3 736 aaPredicted RBP6.34□□□□□ -1.39
APP-217ENST00000548570 ZBTB40Q9NUA8 1239 aa6.34□□□□□ -1.39
APP-217ENST00000548570 CWC25Q9NXE8 425 aaPredicted RBP6.34□□□□□ -1.39
APP-217ENST00000548570 TUBGCP6Q96RT7 1819 aa6.34□□□□□ -1.4
APP-217ENST00000548570 HCLS1P14317 486 aaPredicted RBP6.33□□□□□ -1.4
APP-217ENST00000548570 KCNA3P22001 575 aa6.33□□□□□ -1.4
APP-217ENST00000548570 PARP10Q53GL7 1025 aa6.33□□□□□ -1.4
APP-217ENST00000548570 IFFO2Q5TF58 517 aa6.33□□□□□ -1.4
APP-217ENST00000548570 UBE3BQ7Z3V4 1068 aa6.33□□□□□ -1.4
APP-217ENST00000548570 SIRT2Q8IXJ6 389 aa6.33□□□□□ -1.4
APP-217ENST00000548570 ZBTB38Q8NAP3 1195 aaPredicted RBP6.33□□□□□ -1.4
APP-217ENST00000548570 SETDB2Q96T68 719 aa6.33□□□□□ -1.4
APP-217ENST00000548570 UTP14AQ9BVJ6 771 aaKnown RBP6.33□□□□□ -1.4
APP-217ENST00000548570 TRMT112Q9UI30 125 aaKnown RBP6.33□□□□□ -1.4
APP-217ENST00000548570 ZNF652Q9Y2D9 606 aa6.33□□□□□ -1.4
APP-217ENST00000548570 C10orf71Q711Q0 1435 aa6.33□□□□□ -1.4
APP-217ENST00000548570 COL4A1P02462 1669 aa6.33□□□□□ -1.4
APP-217ENST00000548570 CDHR2Q9BYE9 1310 aa6.32□□□□□ -1.4
APP-217ENST00000548570 BCORQ6W2J9 1755 aa6.32□□□□□ -1.4
APP-217ENST00000548570 IRS4O14654 1257 aaPredicted RBP6.32□□□□□ -1.4
APP-217ENST00000548570 CENPBP07199 599 aaPredicted RBP6.32□□□□□ -1.4
APP-217ENST00000548570 CSF1RP07333 972 aa6.32□□□□□ -1.4
APP-217ENST00000548570 RFX5P48382 616 aaPredicted RBP6.32□□□□□ -1.4
APP-217ENST00000548570 NEXNQ0ZGT2 675 aa6.32□□□□□ -1.4
APP-217ENST00000548570 RABL6Q3YEC7 729 aaPredicted RBP6.32□□□□□ -1.4
APP-217ENST00000548570 NPM2Q86SE8 214 aaKnown RBP6.32□□□□□ -1.4
APP-217ENST00000548570 NBPF5PQ86XG9 351 aaPredicted RBP6.32□□□□□ -1.4
APP-217ENST00000548570 ITPRIPQ8IWB1 547 aa6.32□□□□□ -1.4
APP-217ENST00000548570 TTLL11Q8NHH1 800 aa6.32□□□□□ -1.4
APP-217ENST00000548570 PLA2G12BQ9BX93 195 aa6.32□□□□□ -1.4
APP-217ENST00000548570 C1orf115Q9H7X2 142 aa6.32□□□□□ -1.4
APP-217ENST00000548570 PCDHB15Q9Y5E8 787 aa6.32□□□□□ -1.4
APP-217ENST00000548570 LRRFIP2Q9Y608 721 aaKnown RBP6.32□□□□□ -1.4
APP-217ENST00000548570 SH3TC1Q8TE82 1336 aa6.31□□□□□ -1.4
APP-217ENST00000548570 QSER1Q2KHR3 1735 aa6.31□□□□□ -1.4
APP-217ENST00000548570 SF3B3Q15393 1217 aaKnown RBP6.31□□□□□ -1.4
APP-217ENST00000548570 CRY2Q49AN0 593 aa6.31□□□□□ -1.4
APP-217ENST00000548570 TPTE2Q6XPS3 522 aa6.31□□□□□ -1.4
APP-217ENST00000548570 FTSJ3Q8IY81 847 aaKnown RBP6.31□□□□□ -1.4
APP-217ENST00000548570 CNBD1Q8NA66 436 aa6.31□□□□□ -1.4
APP-217ENST00000548570 BICC1Q9H694 974 aaKnown RBP6.31□□□□□ -1.4
APP-217ENST00000548570 VPS9D1Q9Y2B5 631 aa6.31□□□□□ -1.4
APP-217ENST00000548570 RIC1Q4ADV7 1423 aa6.31□□□□□ -1.4
APP-217ENST00000548570 COL24A1Q17RW2 1714 aa6.3□□□□□ -1.4
APP-217ENST00000548570 PNMA6EA0A0J9YXQ4 647 aa6.3□□□□□ -1.4
APP-217ENST00000548570 CHRNA5P30532 468 aa6.3□□□□□ -1.4
APP-217ENST00000548570 CTSWP56202 376 aa6.3□□□□□ -1.4
APP-217ENST00000548570 MTX1Q13505 466 aa6.3□□□□□ -1.4
APP-217ENST00000548570 FAM161AQ3B820 660 aa6.3□□□□□ -1.4
APP-217ENST00000548570 CEP85Q6P2H3 762 aa6.3□□□□□ -1.4
APP-217ENST00000548570 PPP1R42Q7Z4L9 355 aa6.3□□□□□ -1.4
APP-217ENST00000548570 ZNF454Q8N9F8 522 aa6.3□□□□□ -1.4
APP-217ENST00000548570 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.3□□□□□ -1.4
APP-217ENST00000548570 NLGN2Q8NFZ4 835 aa6.3□□□□□ -1.4
APP-217ENST00000548570 CCDC85AQ96PX6 553 aaPredicted RBP6.3□□□□□ -1.4
APP-217ENST00000548570 BRIP1Q9BX63 1249 aa6.3□□□□□ -1.4
APP-217ENST00000548570 SLC4A5Q9BY07 1137 aa6.3□□□□□ -1.4
APP-217ENST00000548570 NBPF3Q9H094 633 aa6.3□□□□□ -1.4
APP-217ENST00000548570 GREM2Q9H772 168 aa6.3□□□□□ -1.4
APP-217ENST00000548570 SPON1Q9HCB6 807 aa6.3□□□□□ -1.4
APP-217ENST00000548570 SEC31BQ9NQW1 1179 aa6.3□□□□□ -1.4
APP-217ENST00000548570 RYDENQ9NUL5 291 aaKnown RBP6.3□□□□□ -1.4
APP-217ENST00000548570 C9orf78Q9NZ63 289 aaPredicted RBP6.3□□□□□ -1.4
APP-217ENST00000548570 DDX19BQ9UMR2 479 aa6.3□□□□□ -1.4
APP-217ENST00000548570 PARP3Q9Y6F1 533 aa6.3□□□□□ -1.4
APP-217ENST00000548570 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.3□□□□□ -1.4
APP-217ENST00000548570 ARFGEF2Q9Y6D5 1785 aa6.3□□□□□ -1.4
APP-217ENST00000548570 TNRC6CQ9HCJ0 1690 aaKnown RBP6.3□□□□□ -1.4
APP-217ENST00000548570 PDE8AO60658 829 aa6.29□□□□□ -1.4
APP-217ENST00000548570 PPP1R37O75864 691 aa6.29□□□□□ -1.4
APP-217ENST00000548570 UBTFL1P0CB47 393 aaPredicted RBP6.29□□□□□ -1.4
APP-217ENST00000548570 SRGNP10124 158 aa6.29□□□□□ -1.4
APP-217ENST00000548570 MS4A1P11836 297 aa6.29□□□□□ -1.4
APP-217ENST00000548570 DPEP1P16444 411 aa6.29□□□□□ -1.4
APP-217ENST00000548570 PTPREP23469 700 aa6.29□□□□□ -1.4
APP-217ENST00000548570 HOXA10P31260 410 aaPredicted RBP6.29□□□□□ -1.4
APP-217ENST00000548570 DSG2Q14126 1118 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms