RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 MRPL18Q9H0U6 180 aaKnown RBP7.82□□□□□ -1.16
SCAF11-210ENST00000547654 USP20Q9Y2K6 914 aa7.82□□□□□ -1.16
SCAF11-210ENST00000547654 DLL1O00548 723 aa7.81□□□□□ -1.16
SCAF11-210ENST00000547654 CMTR1Q8N1G2 835 aaKnown RBP7.81□□□□□ -1.16
SCAF11-210ENST00000547654 STK32AQ8WU08 396 aa7.81□□□□□ -1.16
SCAF11-210ENST00000547654 PCMTD2Q9NV79 361 aa7.81□□□□□ -1.16
SCAF11-210ENST00000547654 TREML1Q86YW5 311 aa7.8□□□□□ -1.16
SCAF11-210ENST00000547654 SRA1Q9HD15 236 aaKnown RBP7.8□□□□□ -1.16
SCAF11-210ENST00000547654 NOVA2Q9UNW9 492 aaKnown RBP7.8□□□□□ -1.16
SCAF11-210ENST00000547654 J3QW42 95 aa7.79□□□□□ -1.16
SCAF11-210ENST00000547654 OPLAHO14841 1288 aa7.79□□□□□ -1.16
SCAF11-210ENST00000547654 EGFRP00533 1210 aa7.79□□□□□ -1.16
SCAF11-210ENST00000547654 FSTP19883 344 aa7.79□□□□□ -1.16
SCAF11-210ENST00000547654 RFX1P22670 979 aa7.79□□□□□ -1.16
SCAF11-210ENST00000547654 IL22RA1Q8N6P7 574 aa7.79□□□□□ -1.16
SCAF11-210ENST00000547654 FAM200AQ8TCP9 573 aa7.79□□□□□ -1.16
SCAF11-210ENST00000547654 ACIN1Q9UKV3 1341 aaKnown RBP7.78□□□□□ -1.16
SCAF11-210ENST00000547654 LOC102724428A0A0B4J2F2 783 aa7.78□□□□□ -1.16
SCAF11-210ENST00000547654 F8W735 103 aaPredicted RBP7.78□□□□□ -1.16
SCAF11-210ENST00000547654 PTCD1O75127 700 aaKnown RBP7.78□□□□□ -1.16
SCAF11-210ENST00000547654 ALX3O95076 343 aa7.78□□□□□ -1.16
SCAF11-210ENST00000547654 SIK1P57059 783 aa7.78□□□□□ -1.16
SCAF11-210ENST00000547654 MAP4K3Q8IVH8 894 aa7.78□□□□□ -1.16
SCAF11-210ENST00000547654 DZIP1LQ8IYY4 767 aaKnown RBP7.78□□□□□ -1.16
SCAF11-210ENST00000547654 MMP20O60882 483 aa7.77□□□□□ -1.17
SCAF11-210ENST00000547654 GLB1P16278 677 aa7.77□□□□□ -1.17
SCAF11-210ENST00000547654 SOX18P35713 384 aa7.77□□□□□ -1.17
SCAF11-210ENST00000547654 SWI5Q1ZZU3 235 aa7.77□□□□□ -1.17
SCAF11-210ENST00000547654 LRFN2Q9ULH4 789 aa7.77□□□□□ -1.17
SCAF11-210ENST00000547654 FKBP5Q13451 457 aaPredicted RBP7.76□□□□□ -1.17
SCAF11-210ENST00000547654 TMEM164Q5U3C3 297 aa7.76□□□□□ -1.17
SCAF11-210ENST00000547654 SLC51AQ86UW1 340 aa7.76□□□□□ -1.17
SCAF11-210ENST00000547654 SERPINA10Q9UK55 444 aa7.76□□□□□ -1.17
SCAF11-210ENST00000547654 HOXD8P13378 290 aaPredicted RBP7.75□□□□□ -1.17
SCAF11-210ENST00000547654 SSTR4P31391 388 aa7.75□□□□□ -1.17
SCAF11-210ENST00000547654 FAM26DQ5JW98 314 aa7.75□□□□□ -1.17
SCAF11-210ENST00000547654 MCTP1Q6DN14 999 aa7.75□□□□□ -1.17
SCAF11-210ENST00000547654 TMEM130Q8N3G9 435 aa7.75□□□□□ -1.17
SCAF11-210ENST00000547654 PBXIP1Q96AQ6 731 aa7.75□□□□□ -1.17
SCAF11-210ENST00000547654 MUC3BQ9H195 1237 aa7.75□□□□□ -1.17
SCAF11-210ENST00000547654 TRIM33Q9UPN9 1127 aa7.75□□□□□ -1.17
SCAF11-210ENST00000547654 KCNMB2Q9Y691 235 aa7.75□□□□□ -1.17
SCAF11-210ENST00000547654 SETDB1Q15047 1291 aa7.74□□□□□ -1.17
SCAF11-210ENST00000547654 CAPN12Q6ZSI9 719 aa7.74□□□□□ -1.17
SCAF11-210ENST00000547654 CACTIN-AS1Q8N1I8 211 aa7.74□□□□□ -1.17
SCAF11-210ENST00000547654 AGGF1Q8N302 714 aaeCLIP7.74□□□□□ -1.17
SCAF11-210ENST00000547654 CCDC82Q8N4S0 544 aa7.74□□□□□ -1.17
SCAF11-210ENST00000547654 TMEM88BA6NKF7 163 aa7.73□□□□□ -1.17
SCAF11-210ENST00000547654 GSC2O15499 205 aa7.73□□□□□ -1.17
SCAF11-210ENST00000547654 COX20Q5RI15 118 aa7.73□□□□□ -1.17
SCAF11-210ENST00000547654 Q6ZS46 218 aa7.73□□□□□ -1.17
SCAF11-210ENST00000547654 NLRP13Q86W25 1043 aa7.73□□□□□ -1.17
SCAF11-210ENST00000547654 CLP1Q92989 425 aaKnown RBP7.73□□□□□ -1.17
SCAF11-210ENST00000547654 PPME1Q9Y570 386 aa7.73□□□□□ -1.17
SCAF11-210ENST00000547654 SUPT5HO00267 1087 aaKnown RBP7.72□□□□□ -1.17
SCAF11-210ENST00000547654 TRIP4Q15650 581 aaPredicted RBP7.72□□□□□ -1.17
SCAF11-210ENST00000547654 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.72□□□□□ -1.17
SCAF11-210ENST00000547654 PRIMPOLQ96LW4 560 aa7.72□□□□□ -1.17
SCAF11-210ENST00000547654 RAXQ9Y2V3 346 aa7.72□□□□□ -1.17
SCAF11-210ENST00000547654 UBAP1LF5GYI3 381 aa7.71□□□□□ -1.18
SCAF11-210ENST00000547654 BRD2P25440 801 aaKnown RBP7.71□□□□□ -1.18
SCAF11-210ENST00000547654 CD97P48960 835 aa7.71□□□□□ -1.18
SCAF11-210ENST00000547654 ETFBKMTQ8IXQ9 262 aa7.71□□□□□ -1.18
SCAF11-210ENST00000547654 COL26A1Q96A83 441 aa7.71□□□□□ -1.18
SCAF11-210ENST00000547654 SPACA7Q96KW9 195 aa7.71□□□□□ -1.18
SCAF11-210ENST00000547654 FAM13BQ9NYF5 915 aa7.71□□□□□ -1.18
SCAF11-210ENST00000547654 CXXC1Q9P0U4 656 aaPredicted RBP7.71□□□□□ -1.18
SCAF11-210ENST00000547654 TNFRSF10BO14763 440 aa7.7□□□□□ -1.18
SCAF11-210ENST00000547654 DHX15O43143 795 aaKnown RBP7.7□□□□□ -1.18
SCAF11-210ENST00000547654 PRMT3O60678 531 aa7.7□□□□□ -1.18
SCAF11-210ENST00000547654 C16orf46Q6P387 395 aa7.7□□□□□ -1.18
SCAF11-210ENST00000547654 ACAD11Q709F0 780 aa7.7□□□□□ -1.18
SCAF11-210ENST00000547654 CEP41Q9BYV8 373 aa7.7□□□□□ -1.18
SCAF11-210ENST00000547654 SAP130Q9H0E3 1048 aa7.7□□□□□ -1.18
SCAF11-210ENST00000547654 STOML1Q9UBI4 398 aa7.7□□□□□ -1.18
SCAF11-210ENST00000547654 LINC01387J3KSC0 135 aa7.69□□□□□ -1.18
SCAF11-210ENST00000547654 SMNDC1O75940 238 aaKnown RBP eCLIP7.69□□□□□ -1.18
SCAF11-210ENST00000547654 IGLV1-40P01703 118 aa7.69□□□□□ -1.18
SCAF11-210ENST00000547654 HYAL2Q12891 473 aa7.69□□□□□ -1.18
SCAF11-210ENST00000547654 OR13H1Q8NG92 308 aa7.69□□□□□ -1.18
SCAF11-210ENST00000547654 PIK3R5Q8WYR1 880 aa7.69□□□□□ -1.18
SCAF11-210ENST00000547654 LACRTQ9GZZ8 138 aa7.69□□□□□ -1.18
SCAF11-210ENST00000547654 FAM177BA6PVY3 158 aa7.68□□□□□ -1.18
SCAF11-210ENST00000547654 PAX4O43316 350 aa7.68□□□□□ -1.18
SCAF11-210ENST00000547654 CD68P34810 354 aaPredicted RBP7.68□□□□□ -1.18
SCAF11-210ENST00000547654 SCNN1AP37088 669 aa7.68□□□□□ -1.18
SCAF11-210ENST00000547654 IRAK1P51617 712 aa7.68□□□□□ -1.18
SCAF11-210ENST00000547654 ATP11AP98196 1134 aa7.68□□□□□ -1.18
SCAF11-210ENST00000547654 CEP135Q66GS9 1140 aa7.68□□□□□ -1.18
SCAF11-210ENST00000547654 PHLDB3Q6NSJ2 640 aa7.68□□□□□ -1.18
SCAF11-210ENST00000547654 FAM117BQ6P1L5 589 aa7.68□□□□□ -1.18
SCAF11-210ENST00000547654 TXNDC11Q6PKC3 985 aa7.68□□□□□ -1.18
SCAF11-210ENST00000547654 UTP4Q969X6 686 aaKnown RBP7.68□□□□□ -1.18
SCAF11-210ENST00000547654 WISP1O95388 367 aa7.67□□□□□ -1.18
SCAF11-210ENST00000547654 YBX3P16989 372 aaKnown RBP eCLIP7.67□□□□□ -1.18
SCAF11-210ENST00000547654 CDC27P30260 824 aa7.67□□□□□ -1.18
SCAF11-210ENST00000547654 RANGAP1P46060 587 aaPredicted RBP7.67□□□□□ -1.18
SCAF11-210ENST00000547654 TTC39BQ5VTQ0 682 aaPredicted RBP7.67□□□□□ -1.18
SCAF11-210ENST00000547654 GALNT11Q8NCW6 608 aa7.67□□□□□ -1.18
SCAF11-210ENST00000547654 CCDC97Q96F63 343 aaPredicted RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms