RNA–Protein interactions for RNA: ENST00000547417.1

CPNE8-205, Transcript of copine 8, humanhuman

TSL 2

Gene CPNE8, Length 376 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-205ENST00000547417 FMNL2Q96PY5 1086 aa4.09□□□□□ -1.75
CPNE8-205ENST00000547417 ARID3AQ99856 593 aa4.09□□□□□ -1.75
CPNE8-205ENST00000547417 MRPL18Q9H0U6 180 aaKnown RBP4.09□□□□□ -1.75
CPNE8-205ENST00000547417 RBSNQ9H1K0 784 aa4.09□□□□□ -1.75
CPNE8-205ENST00000547417 ARID3CA6NKF2 412 aa4.08□□□□□ -1.76
CPNE8-205ENST00000547417 GHRHP01286 108 aa4.08□□□□□ -1.76
CPNE8-205ENST00000547417 TRIM26Q12899 539 aaPredicted RBP4.08□□□□□ -1.76
CPNE8-205ENST00000547417 GDF6Q6KF10 455 aaPredicted RBP4.08□□□□□ -1.76
CPNE8-205ENST00000547417 TREML1Q86YW5 311 aa4.08□□□□□ -1.76
CPNE8-205ENST00000547417 RGL4Q8IZJ4 473 aa4.08□□□□□ -1.76
CPNE8-205ENST00000547417 IL22RA1Q8N6P7 574 aa4.08□□□□□ -1.76
CPNE8-205ENST00000547417 SRA1Q9HD15 236 aaKnown RBP4.08□□□□□ -1.76
CPNE8-205ENST00000547417 SERPINA10Q9UK55 444 aa4.08□□□□□ -1.76
CPNE8-205ENST00000547417 LRFN2Q9ULH4 789 aa4.08□□□□□ -1.76
CPNE8-205ENST00000547417 USP20Q9Y2K6 914 aa4.08□□□□□ -1.76
CPNE8-205ENST00000547417 ZBTB7CA1YPR0 619 aa4.07□□□□□ -1.76
CPNE8-205ENST00000547417 F8W735 103 aaPredicted RBP4.07□□□□□ -1.76
CPNE8-205ENST00000547417 MMP20O60882 483 aa4.07□□□□□ -1.76
CPNE8-205ENST00000547417 ALX3O95076 343 aa4.07□□□□□ -1.76
CPNE8-205ENST00000547417 HOXD8P13378 290 aaPredicted RBP4.07□□□□□ -1.76
CPNE8-205ENST00000547417 FSTP19883 344 aa4.07□□□□□ -1.76
CPNE8-205ENST00000547417 SOX18P35713 384 aa4.07□□□□□ -1.76
CPNE8-205ENST00000547417 MAP4K3Q8IVH8 894 aa4.07□□□□□ -1.76
CPNE8-205ENST00000547417 CACTIN-AS1Q8N1I8 211 aa4.07□□□□□ -1.76
CPNE8-205ENST00000547417 NSUN5Q96P11 429 aaKnown RBP4.07□□□□□ -1.76
CPNE8-205ENST00000547417 KRTAP4-9Q9BYQ8 210 aa4.07□□□□□ -1.76
CPNE8-205ENST00000547417 PCMTD2Q9NV79 361 aa4.07□□□□□ -1.76
CPNE8-205ENST00000547417 KCNMB2Q9Y691 235 aa4.07□□□□□ -1.76
CPNE8-205ENST00000547417 RFX1P22670 979 aa4.06□□□□□ -1.76
CPNE8-205ENST00000547417 RANGAP1P46060 587 aaPredicted RBP4.06□□□□□ -1.76
CPNE8-205ENST00000547417 SETDB1Q15047 1291 aa4.06□□□□□ -1.76
CPNE8-205ENST00000547417 COX20Q5RI15 118 aa4.06□□□□□ -1.76
CPNE8-205ENST00000547417 CCDC82Q8N4S0 544 aa4.06□□□□□ -1.76
CPNE8-205ENST00000547417 MUC3BQ9H195 1237 aa4.06□□□□□ -1.76
CPNE8-205ENST00000547417 GSC2O15499 205 aa4.05□□□□□ -1.76
CPNE8-205ENST00000547417 PTCD1O75127 700 aaKnown RBP4.05□□□□□ -1.76
CPNE8-205ENST00000547417 BRD2P25440 801 aaKnown RBP4.05□□□□□ -1.76
CPNE8-205ENST00000547417 SSTR4P31391 388 aa4.05□□□□□ -1.76
CPNE8-205ENST00000547417 FZD5Q13467 585 aa4.05□□□□□ -1.76
CPNE8-205ENST00000547417 Q6ZS46 218 aa4.05□□□□□ -1.76
CPNE8-205ENST00000547417 NLRP13Q86W25 1043 aa4.05□□□□□ -1.76
CPNE8-205ENST00000547417 TRIM33Q9UPN9 1127 aa4.05□□□□□ -1.76
CPNE8-205ENST00000547417 RAXQ9Y2V3 346 aa4.05□□□□□ -1.76
CPNE8-205ENST00000547417 PPME1Q9Y570 386 aa4.05□□□□□ -1.76
CPNE8-205ENST00000547417 GLB1P16278 677 aa4.04□□□□□ -1.76
CPNE8-205ENST00000547417 FKBP5Q13451 457 aaPredicted RBP4.04□□□□□ -1.76
CPNE8-205ENST00000547417 CFAP70Q5T0N1 1121 aa4.04□□□□□ -1.76
CPNE8-205ENST00000547417 ETFBKMTQ8IXQ9 262 aa4.04□□□□□ -1.76
CPNE8-205ENST00000547417 AGGF1Q8N302 714 aaeCLIP4.04□□□□□ -1.76
CPNE8-205ENST00000547417 CCDC97Q96F63 343 aaPredicted RBP4.04□□□□□ -1.76
CPNE8-205ENST00000547417 PRIMPOLQ96LW4 560 aa4.04□□□□□ -1.76
CPNE8-205ENST00000547417 NOVA2Q9UNW9 492 aaKnown RBP4.04□□□□□ -1.76
CPNE8-205ENST00000547417 IGLV1-40P01703 118 aa4.03□□□□□ -1.76
CPNE8-205ENST00000547417 CD97P48960 835 aa4.03□□□□□ -1.76
CPNE8-205ENST00000547417 SWI5Q1ZZU3 235 aa4.03□□□□□ -1.76
CPNE8-205ENST00000547417 CDCA8Q53HL2 280 aa4.03□□□□□ -1.76
CPNE8-205ENST00000547417 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.03□□□□□ -1.76
CPNE8-205ENST00000547417 OR13H1Q8NG92 308 aa4.03□□□□□ -1.76
CPNE8-205ENST00000547417 PIK3R5Q8WYR1 880 aa4.03□□□□□ -1.76
CPNE8-205ENST00000547417 SPACA7Q96KW9 195 aa4.03□□□□□ -1.76
CPNE8-205ENST00000547417 UBL7Q96S82 380 aaPredicted RBP4.03□□□□□ -1.76
CPNE8-205ENST00000547417 FAM13BQ9NYF5 915 aa4.03□□□□□ -1.76
CPNE8-205ENST00000547417 STOML1Q9UBI4 398 aa4.03□□□□□ -1.76
CPNE8-205ENST00000547417 ZNF777Q9ULD5 760 aaPredicted RBP4.03□□□□□ -1.76
CPNE8-205ENST00000547417 ACIN1Q9UKV3 1341 aaKnown RBP4.02□□□□□ -1.77
CPNE8-205ENST00000547417 UBAP1LF5GYI3 381 aa4.02□□□□□ -1.77
CPNE8-205ENST00000547417 LINC01387J3KSC0 135 aa4.02□□□□□ -1.77
CPNE8-205ENST00000547417 DHX15O43143 795 aaKnown RBP4.02□□□□□ -1.77
CPNE8-205ENST00000547417 PRMT3O60678 531 aa4.02□□□□□ -1.77
CPNE8-205ENST00000547417 CDC27P30260 824 aa4.02□□□□□ -1.77
CPNE8-205ENST00000547417 CD68P34810 354 aaPredicted RBP4.02□□□□□ -1.77
CPNE8-205ENST00000547417 IRAK1P51617 712 aa4.02□□□□□ -1.77
CPNE8-205ENST00000547417 PDE4CQ08493 712 aa4.02□□□□□ -1.77
CPNE8-205ENST00000547417 HYAL2Q12891 473 aa4.02□□□□□ -1.77
CPNE8-205ENST00000547417 TRIP4Q15650 581 aaPredicted RBP4.02□□□□□ -1.77
CPNE8-205ENST00000547417 TTC39BQ5VTQ0 682 aaPredicted RBP4.02□□□□□ -1.77
CPNE8-205ENST00000547417 CEP135Q66GS9 1140 aa4.02□□□□□ -1.77
CPNE8-205ENST00000547417 C16orf46Q6P387 395 aa4.02□□□□□ -1.77
CPNE8-205ENST00000547417 GALNT11Q8NCW6 608 aa4.02□□□□□ -1.77
CPNE8-205ENST00000547417 TRAIPQ9BWF2 469 aa4.02□□□□□ -1.77
CPNE8-205ENST00000547417 KRTAP4-2Q9BYR5 136 aa4.02□□□□□ -1.77
CPNE8-205ENST00000547417 CEP41Q9BYV8 373 aa4.02□□□□□ -1.77
CPNE8-205ENST00000547417 SAP130Q9H0E3 1048 aa4.02□□□□□ -1.77
CPNE8-205ENST00000547417 FNDC3AQ9Y2H6 1198 aaKnown RBP4.02□□□□□ -1.77
CPNE8-205ENST00000547417 KIAA1324LA8MWY0 1029 aaPredicted RBP4.01□□□□□ -1.77
CPNE8-205ENST00000547417 PPP1R15AO75807 674 aaPredicted RBP4.01□□□□□ -1.77
CPNE8-205ENST00000547417 SMNDC1O75940 238 aaKnown RBP eCLIP4.01□□□□□ -1.77
CPNE8-205ENST00000547417 TGFB1P01137 390 aa4.01□□□□□ -1.77
CPNE8-205ENST00000547417 TAL1P17542 331 aaPredicted RBP4.01□□□□□ -1.77
CPNE8-205ENST00000547417 SCNN1AP37088 669 aa4.01□□□□□ -1.77
CPNE8-205ENST00000547417 ATP11AP98196 1134 aa4.01□□□□□ -1.77
CPNE8-205ENST00000547417 OCLNQ16625 522 aa4.01□□□□□ -1.77
CPNE8-205ENST00000547417 COL13A1Q5TAT6 717 aaPredicted RBP4.01□□□□□ -1.77
CPNE8-205ENST00000547417 ACAD11Q709F0 780 aa4.01□□□□□ -1.77
CPNE8-205ENST00000547417 ARMC10Q8N2F6 343 aa4.01□□□□□ -1.77
CPNE8-205ENST00000547417 COL26A1Q96A83 441 aa4.01□□□□□ -1.77
CPNE8-205ENST00000547417 LACRTQ9GZZ8 138 aa4.01□□□□□ -1.77
CPNE8-205ENST00000547417 CCDC9Q9Y3X0 531 aaKnown RBP4.01□□□□□ -1.77
CPNE8-205ENST00000547417 RNF114Q9Y508 228 aa4.01□□□□□ -1.77
CPNE8-205ENST00000547417 WISP1O95388 367 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms