RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 ANTXR1Q9H6X2 564 aa14.02□□□□□ -0.16
NPC1L1-204ENST00000546276 CHL1O00533 1208 aa14.02□□□□□ -0.17
NPC1L1-204ENST00000546276 LIG1P18858 919 aa14.02□□□□□ -0.17
NPC1L1-204ENST00000546276 GOLGA1Q92805 767 aa14.02□□□□□ -0.17
NPC1L1-204ENST00000546276 CLSTN2Q9H4D0 955 aa14.02□□□□□ -0.17
NPC1L1-204ENST00000546276 TRMT112Q9UI30 125 aaKnown RBP14.02□□□□□ -0.17
NPC1L1-204ENST00000546276 ABCC4O15439 1325 aa14.02□□□□□ -0.17
NPC1L1-204ENST00000546276 CCDC175P0C221 793 aa14.02□□□□□ -0.17
NPC1L1-204ENST00000546276 APOBRQ0VD83 1088 aa14.02□□□□□ -0.17
NPC1L1-204ENST00000546276 MCM6Q14566 821 aa14.02□□□□□ -0.17
NPC1L1-204ENST00000546276 COPS6Q7L5N1 327 aa14.02□□□□□ -0.17
NPC1L1-204ENST00000546276 PRM3Q9NNZ6 103 aa14.02□□□□□ -0.17
NPC1L1-204ENST00000546276 ADGBQ8N7X0 1667 aa14.01□□□□□ -0.17
NPC1L1-204ENST00000546276 MAP3K5Q99683 1374 aa14.01□□□□□ -0.17
NPC1L1-204ENST00000546276 IVLP07476 585 aa14.01□□□□□ -0.17
NPC1L1-204ENST00000546276 CAVIN4Q5BKX8 364 aa14.01□□□□□ -0.17
NPC1L1-204ENST00000546276 AKAP4Q5JQC9 854 aa14.01□□□□□ -0.17
NPC1L1-204ENST00000546276 CEP112Q8N8E3 955 aa14.01□□□□□ -0.17
NPC1L1-204ENST00000546276 SEC63Q9UGP8 760 aaKnown RBP14.01□□□□□ -0.17
NPC1L1-204ENST00000546276 KDM6BO15054 1643 aa14.01□□□□□ -0.17
NPC1L1-204ENST00000546276 FAM160A1Q05DH4 1040 aa14.01□□□□□ -0.17
NPC1L1-204ENST00000546276 TDRD12Q587J7 1177 aaKnown RBP14.01□□□□□ -0.17
NPC1L1-204ENST00000546276 PRC1O43663 620 aa14.01□□□□□ -0.17
NPC1L1-204ENST00000546276 ZNF75DP51815 510 aa14.01□□□□□ -0.17
NPC1L1-204ENST00000546276 SPAG1Q07617 926 aa14.01□□□□□ -0.17
NPC1L1-204ENST00000546276 NAA15Q9BXJ9 866 aaKnown RBP14.01□□□□□ -0.17
NPC1L1-204ENST00000546276 ZNF287Q9HBT7 754 aa14.01□□□□□ -0.17
NPC1L1-204ENST00000546276 BMP15O95972 392 aa14.01□□□□□ -0.17
NPC1L1-204ENST00000546276 NEFHP12036 1026 aa14.01□□□□□ -0.17
NPC1L1-204ENST00000546276 RPS6KB1P23443 525 aa14.01□□□□□ -0.17
NPC1L1-204ENST00000546276 CKAP4Q07065 602 aaKnown RBP14.01□□□□□ -0.17
NPC1L1-204ENST00000546276 ENOX2Q16206 610 aaKnown RBP14.01□□□□□ -0.17
NPC1L1-204ENST00000546276 GIMAP7Q8NHV1 300 aa14.01□□□□□ -0.17
NPC1L1-204ENST00000546276 PAG1Q9NWQ8 432 aa14.01□□□□□ -0.17
NPC1L1-204ENST00000546276 IL15P40933 162 aaPredicted RBP14□□□□□ -0.17
NPC1L1-204ENST00000546276 BRAPQ7Z569 592 aa14□□□□□ -0.17
NPC1L1-204ENST00000546276 FAM114A1Q8IWE2 563 aa14□□□□□ -0.17
NPC1L1-204ENST00000546276 JADE2Q9NQC1 790 aa14□□□□□ -0.17
NPC1L1-204ENST00000546276 DNA2P51530 1060 aa14□□□□□ -0.17
NPC1L1-204ENST00000546276 LMBR1LQ6UX01 489 aa14□□□□□ -0.17
NPC1L1-204ENST00000546276 MKNK2Q9HBH9 465 aa14□□□□□ -0.17
NPC1L1-204ENST00000546276 CBX8Q9HC52 389 aa14□□□□□ -0.17
NPC1L1-204ENST00000546276 YTHDC2Q9H6S0 1430 aaKnown RBP14□□□□□ -0.17
NPC1L1-204ENST00000546276 HSPA4P34932 840 aa14□□□□□ -0.17
NPC1L1-204ENST00000546276 USP5P45974 858 aa14□□□□□ -0.17
NPC1L1-204ENST00000546276 CWF19L2Q2TBE0 894 aaKnown RBP14□□□□□ -0.17
NPC1L1-204ENST00000546276 VPS36Q86VN1 386 aa14□□□□□ -0.17
NPC1L1-204ENST00000546276 EYA1Q99502 592 aa14□□□□□ -0.17
NPC1L1-204ENST00000546276 RAB34Q9BZG1 259 aa14□□□□□ -0.17
NPC1L1-204ENST00000546276 RMND1Q9NWS8 449 aa14□□□□□ -0.17
NPC1L1-204ENST00000546276 SEPT7Q16181 437 aaKnown RBP13.99□□□□□ -0.17
NPC1L1-204ENST00000546276 KIF20AO95235 890 aa13.99□□□□□ -0.17
NPC1L1-204ENST00000546276 UBA7P41226 1012 aa13.99□□□□□ -0.17
NPC1L1-204ENST00000546276 AFMP43652 599 aa13.99□□□□□ -0.17
NPC1L1-204ENST00000546276 CCDC178Q5BJE1 867 aa13.99□□□□□ -0.17
NPC1L1-204ENST00000546276 RNF187Q5TA31 235 aaPredicted RBP13.99□□□□□ -0.17
NPC1L1-204ENST00000546276 SLC27A2O14975 620 aa13.99□□□□□ -0.17
NPC1L1-204ENST00000546276 WTAPQ15007 396 aa13.99□□□□□ -0.17
NPC1L1-204ENST00000546276 RRAGBQ5VZM2 374 aa13.99□□□□□ -0.17
NPC1L1-204ENST00000546276 CTAGE9A4FU28 777 aa13.98□□□□□ -0.17
NPC1L1-204ENST00000546276 UQCRFS1P1P0C7P4 283 aa13.98□□□□□ -0.17
NPC1L1-204ENST00000546276 U2AF2P26368 475 aaKnown RBP eCLIP13.98□□□□□ -0.172e-6■■■□□ 18.4
NPC1L1-204ENST00000546276 TUBB4BP68371 445 aa13.98□□□□□ -0.17
NPC1L1-204ENST00000546276 KRT23Q9C075 422 aa13.98□□□□□ -0.17
NPC1L1-204ENST00000546276 TCP11L1Q9NUJ3 509 aa13.98□□□□□ -0.17
NPC1L1-204ENST00000546276 ABCC10Q5T3U5 1492 aa13.98□□□□□ -0.17
NPC1L1-204ENST00000546276 PPP1R12BO60237 982 aaPredicted RBP13.98□□□□□ -0.17
NPC1L1-204ENST00000546276 AMPD3Q01432 767 aa13.98□□□□□ -0.17
NPC1L1-204ENST00000546276 TMEM266Q2M3C6 531 aa13.98□□□□□ -0.17
NPC1L1-204ENST00000546276 FAM173BQ6P4H8 233 aa13.98□□□□□ -0.17
NPC1L1-204ENST00000546276 PLCD4Q9BRC7 762 aa13.98□□□□□ -0.17
NPC1L1-204ENST00000546276 KDM5DQ9BY66 1539 aa13.98□□□□□ -0.17
NPC1L1-204ENST00000546276 KDM5AP29375 1690 aaKnown RBP13.98□□□□□ -0.17
NPC1L1-204ENST00000546276 TRIM47Q96LD4 638 aa13.98□□□□□ -0.17
NPC1L1-204ENST00000546276 RNF216Q9NWF9 866 aaPredicted RBP13.98□□□□□ -0.17
NPC1L1-204ENST00000546276 PNMA6EA0A0J9YXQ4 647 aa13.98□□□□□ -0.17
NPC1L1-204ENST00000546276 RNF113AO15541 343 aaKnown RBP13.98□□□□□ -0.17
NPC1L1-204ENST00000546276 GPTP24298 496 aa13.98□□□□□ -0.17
NPC1L1-204ENST00000546276 IFFO1Q0D2I5 559 aa13.98□□□□□ -0.17
NPC1L1-204ENST00000546276 LEO1Q8WVC0 666 aaPredicted RBP13.98□□□□□ -0.17
NPC1L1-204ENST00000546276 CYLC1P35663 651 aaPredicted RBP13.97□□□□□ -0.17
NPC1L1-204ENST00000546276 HLTFQ14527 1009 aaKnown RBP eCLIP13.97□□□□□ -0.17
NPC1L1-204ENST00000546276 RTN1Q16799 776 aa13.97□□□□□ -0.17
NPC1L1-204ENST00000546276 TMTC2Q8N394 836 aa13.97□□□□□ -0.17
NPC1L1-204ENST00000546276 KIF5BP33176 963 aa13.97□□□□□ -0.17
NPC1L1-204ENST00000546276 PIP4K2BP78356 416 aa13.97□□□□□ -0.17
NPC1L1-204ENST00000546276 MYL5Q02045 173 aa13.97□□□□□ -0.17
NPC1L1-204ENST00000546276 PKP1Q13835 747 aa13.97□□□□□ -0.17
NPC1L1-204ENST00000546276 CHST3Q7LGC8 479 aa13.97□□□□□ -0.17
NPC1L1-204ENST00000546276 GPT2Q8TD30 523 aa13.97□□□□□ -0.17
NPC1L1-204ENST00000546276 CNNM2Q9H8M5 875 aa13.97□□□□□ -0.17
NPC1L1-204ENST00000546276 A0A1B0GVL5 298 aa13.97□□□□□ -0.17
NPC1L1-204ENST00000546276 TRIM21P19474 475 aaKnown RBP13.97□□□□□ -0.17
NPC1L1-204ENST00000546276 WDR7Q9Y4E6 1490 aa13.97□□□□□ -0.17
NPC1L1-204ENST00000546276 GABPB1Q06547 395 aaPredicted RBP13.97□□□□□ -0.17
NPC1L1-204ENST00000546276 ZRSR2Q15696 482 aaKnown RBP13.97□□□□□ -0.17
NPC1L1-204ENST00000546276 ZFP91Q96JP5 570 aaPredicted RBP13.97□□□□□ -0.17
NPC1L1-204ENST00000546276 CAPN2P17655 700 aa13.96□□□□□ -0.17
NPC1L1-204ENST00000546276 MATR3P43243 847 aaKnown RBP eCLIP13.96□□□□□ -0.17
NPC1L1-204ENST00000546276 UTP14AQ9BVJ6 771 aaKnown RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms