RNA–Protein interactions for RNA: ENST00000544872.1

CIT-216, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-216ENST00000544872 CWC25Q9NXE8 425 aaPredicted RBP12.03□□□□□ -0.48
CIT-216ENST00000544872 SLC4A10Q6U841 1118 aa12.02□□□□□ -0.49
CIT-216ENST00000544872 CDC37L1Q7L3B6 337 aa12.02□□□□□ -0.49
CIT-216ENST00000544872 LRP10Q7Z4F1 713 aa12.02□□□□□ -0.49
CIT-216ENST00000544872 C2orf69Q8N8R5 385 aa12.02□□□□□ -0.49
CIT-216ENST00000544872 DNAAF4Q8WXU2 420 aa12.02□□□□□ -0.49
CIT-216ENST00000544872 RPGRQ92834 1020 aaKnown RBP12.02□□□□□ -0.49
CIT-216ENST00000544872 API5Q9BZZ5 524 aaKnown RBP12.02□□□□□ -0.49
CIT-216ENST00000544872 RAPGEFL1Q9UHV5 662 aa12.02□□□□□ -0.49
CIT-216ENST00000544872 SH3TC1Q8TE82 1336 aa12.02□□□□□ -0.49
CIT-216ENST00000544872 KIF16BQ96L93 1317 aa12.02□□□□□ -0.49
CIT-216ENST00000544872 SLX4Q8IY92 1834 aa12.02□□□□□ -0.49
CIT-216ENST00000544872 ATP5J2-PTCD1G3V325 749 aa12.01□□□□□ -0.49
CIT-216ENST00000544872 MS4A1P11836 297 aa12.01□□□□□ -0.49
CIT-216ENST00000544872 ALDH1B1P30837 517 aa12.01□□□□□ -0.49
CIT-216ENST00000544872 PRR5LQ6MZQ0 368 aa12.01□□□□□ -0.49
CIT-216ENST00000544872 NLRP10Q86W26 655 aa12.01□□□□□ -0.49
CIT-216ENST00000544872 REM2Q8IYK8 340 aaPredicted RBP12.01□□□□□ -0.49
CIT-216ENST00000544872 RTKN2Q8IZC4 609 aa12.01□□□□□ -0.49
CIT-216ENST00000544872 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.01□□□□□ -0.49
CIT-216ENST00000544872 LINS1Q8NG48 757 aa12.01□□□□□ -0.49
CIT-216ENST00000544872 SSH1Q8WYL5 1049 aa12.01□□□□□ -0.49
CIT-216ENST00000544872 MASTLQ96GX5 879 aa12.01□□□□□ -0.49
CIT-216ENST00000544872 LRCH3Q96II8 777 aa12.01□□□□□ -0.49
CIT-216ENST00000544872 TMEM106CQ9BVX2 250 aa12.01□□□□□ -0.49
CIT-216ENST00000544872 NRXN2Q9P2S2 1712 aa12□□□□□ -0.49
CIT-216ENST00000544872 SIPA1L3O60292 1781 aaPredicted RBP12□□□□□ -0.49
CIT-216ENST00000544872 UBR2Q8IWV8 1755 aa12□□□□□ -0.49
CIT-216ENST00000544872 SUSD4Q5VX71 490 aa12□□□□□ -0.49
CIT-216ENST00000544872 MRPL50Q8N5N7 158 aaKnown RBP12□□□□□ -0.49
CIT-216ENST00000544872 ZBTB38Q8NAP3 1195 aaPredicted RBP12□□□□□ -0.49
CIT-216ENST00000544872 DPF3Q92784 378 aa12□□□□□ -0.49
CIT-216ENST00000544872 C9orf78Q9NZ63 289 aaPredicted RBP12□□□□□ -0.49
CIT-216ENST00000544872 STXBP5LQ9Y2K9 1186 aa12□□□□□ -0.49
CIT-216ENST00000544872 CACNA1SQ13698 1873 aa12□□□□□ -0.49
CIT-216ENST00000544872 DLG5Q8TDM6 1919 aa11.99□□□□□ -0.49
CIT-216ENST00000544872 GPR25O00155 361 aa11.99□□□□□ -0.49
CIT-216ENST00000544872 NPR1P16066 1061 aa11.99□□□□□ -0.49
CIT-216ENST00000544872 RARSP54136 660 aaKnown RBP11.99□□□□□ -0.49
CIT-216ENST00000544872 DEFB123Q8N688 67 aa11.99□□□□□ -0.49
CIT-216ENST00000544872 FRAT1Q92837 279 aaPredicted RBP11.99□□□□□ -0.49
CIT-216ENST00000544872 RBM17Q96I25 401 aaKnown RBP11.99□□□□□ -0.49
CIT-216ENST00000544872 ISCA1Q9BUE6 129 aa11.99□□□□□ -0.49
CIT-216ENST00000544872 BCL2L13Q9BXK5 485 aa11.99□□□□□ -0.49
CIT-216ENST00000544872 SRCIN1Q9C0H9 1055 aa11.99□□□□□ -0.49
CIT-216ENST00000544872 GBA2Q9HCG7 927 aaPredicted RBP11.99□□□□□ -0.49
CIT-216ENST00000544872 TJP1Q07157 1748 aa11.99□□□□□ -0.49
CIT-216ENST00000544872 KDM3BQ7LBC6 1761 aa11.99□□□□□ -0.49
CIT-216ENST00000544872 PAPPA2Q9BXP8 1791 aa11.98□□□□□ -0.49
CIT-216ENST00000544872 IBTKQ9P2D0 1353 aaPredicted RBP11.98□□□□□ -0.49
CIT-216ENST00000544872 SOX1O00570 391 aaPredicted RBP11.98□□□□□ -0.49
CIT-216ENST00000544872 FKTNO75072 461 aa11.98□□□□□ -0.49
CIT-216ENST00000544872 ALDH1L1O75891 902 aa11.98□□□□□ -0.49
CIT-216ENST00000544872 SLC10A3P09131 477 aa11.98□□□□□ -0.49
CIT-216ENST00000544872 SRGNP10124 158 aa11.98□□□□□ -0.49
CIT-216ENST00000544872 CCT4P50991 539 aaKnown RBP11.98□□□□□ -0.49
CIT-216ENST00000544872 DDX46Q7L014 1031 aaKnown RBP11.98□□□□□ -0.49
CIT-216ENST00000544872 G2E3Q7L622 706 aa11.98□□□□□ -0.49
CIT-216ENST00000544872 USP48Q86UV5 1035 aa11.98□□□□□ -0.49
CIT-216ENST00000544872 FTSJ3Q8IY81 847 aaKnown RBP11.98□□□□□ -0.49
CIT-216ENST00000544872 ARHGAP45Q92619 1136 aa11.98□□□□□ -0.49
CIT-216ENST00000544872 NOB1Q9ULX3 412 aaKnown RBP11.98□□□□□ -0.49
CIT-216ENST00000544872 TRIM17Q9Y577 477 aa11.98□□□□□ -0.49
CIT-216ENST00000544872 IRS4O14654 1257 aaPredicted RBP11.97□□□□□ -0.49
CIT-216ENST00000544872 PCCAP05165 728 aaPredicted RBP11.97□□□□□ -0.49
CIT-216ENST00000544872 SLC10A5Q5PT55 438 aa11.97□□□□□ -0.49
CIT-216ENST00000544872 OLFM4Q6UX06 510 aa11.97□□□□□ -0.49
CIT-216ENST00000544872 NUTM1Q86Y26 1132 aa11.97□□□□□ -0.49
CIT-216ENST00000544872 FAM89AQ96GI7 184 aa11.97□□□□□ -0.49
CIT-216ENST00000544872 COL11A2P13942 1736 aaPredicted RBP11.97□□□□□ -0.49
CIT-216ENST00000544872 NEURL1BA8MQ27 555 aa11.96□□□□□ -0.49
CIT-216ENST00000544872 NTSR2O95665 410 aa11.96□□□□□ -0.49
CIT-216ENST00000544872 HOXD11P31277 338 aaPredicted RBP11.96□□□□□ -0.49
CIT-216ENST00000544872 CCDC152Q4G0S7 254 aa11.96□□□□□ -0.49
CIT-216ENST00000544872 GRIPAP1Q4V328 841 aa11.96□□□□□ -0.49
CIT-216ENST00000544872 RTL5Q5HYW3 569 aaPredicted RBP11.96□□□□□ -0.49
CIT-216ENST00000544872 ZKSCAN2Q63HK3 967 aa11.96□□□□□ -0.49
CIT-216ENST00000544872 C7orf43Q8WVR3 580 aa11.96□□□□□ -0.49
CIT-216ENST00000544872 CHMP4BQ9H444 224 aaKnown RBP11.96□□□□□ -0.49
CIT-216ENST00000544872 GPRC5DQ9NZD1 345 aa11.96□□□□□ -0.49
CIT-216ENST00000544872 UBN2Q6ZU65 1347 aa11.95□□□□□ -0.5
CIT-216ENST00000544872 PDE8AO60658 829 aa11.95□□□□□ -0.5
CIT-216ENST00000544872 GCKRQ14397 625 aa11.95□□□□□ -0.5
CIT-216ENST00000544872 LARGE2Q8N3Y3 721 aa11.95□□□□□ -0.5
CIT-216ENST00000544872 ZC3H15Q8WU90 426 aaKnown RBP11.95□□□□□ -0.5
CIT-216ENST00000544872 RCAN3Q9UKA8 241 aa11.95□□□□□ -0.5
CIT-216ENST00000544872 ANKRD31Q8N7Z5 1873 aa11.94□□□□□ -0.5
CIT-216ENST00000544872 F6X3S4 739 aa11.94□□□□□ -0.5
CIT-216ENST00000544872 BBOX1O75936 387 aa11.94□□□□□ -0.5
CIT-216ENST00000544872 HCLS1P14317 486 aaPredicted RBP11.94□□□□□ -0.5
CIT-216ENST00000544872 CWF19L2Q2TBE0 894 aaKnown RBP11.94□□□□□ -0.5
CIT-216ENST00000544872 SLC4A8Q2Y0W8 1093 aa11.94□□□□□ -0.5
CIT-216ENST00000544872 CC2D2BQ6DHV5 1058 aa11.94□□□□□ -0.5
CIT-216ENST00000544872 ATF7IPQ6VMQ6 1270 aa11.94□□□□□ -0.5
CIT-216ENST00000544872 Q7L0L9 218 aa11.94□□□□□ -0.5
CIT-216ENST00000544872 TMC4Q7Z404 712 aa11.94□□□□□ -0.5
CIT-216ENST00000544872 SNX27Q96L92 541 aa11.94□□□□□ -0.5
CIT-216ENST00000544872 KLRG2A4D1S0 409 aaPredicted RBP11.93□□□□□ -0.5
CIT-216ENST00000544872 GRM8O00222 908 aa11.93□□□□□ -0.5
CIT-216ENST00000544872 TAF7LQ5H9L4 462 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms