RNA–Protein interactions for RNA: ENST00000543991.1

SMCO2-206, Transcript of single-pass membrane protein with coiled-coil domains 2, humanhuman

TSL 3

Gene SMCO2, Length 486 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO2-206ENST00000543991 OR13H1Q8NG92 308 aa10.12□□□□□ -0.79
SMCO2-206ENST00000543991 BCO2Q9BYV7 579 aa10.12□□□□□ -0.79
SMCO2-206ENST00000543991 SUV39H2Q9H5I1 410 aa10.12□□□□□ -0.79
SMCO2-206ENST00000543991 EFCC1Q9HA90 598 aa10.12□□□□□ -0.79
SMCO2-206ENST00000543991 STRN4Q9NRL3 753 aa10.12□□□□□ -0.79
SMCO2-206ENST00000543991 MARK1Q9P0L2 795 aa10.12□□□□□ -0.79
SMCO2-206ENST00000543991 RSF1Q96T23 1441 aaPredicted RBP10.12□□□□□ -0.79
SMCO2-206ENST00000543991 BNIP3LO60238 219 aa10.11□□□□□ -0.79
SMCO2-206ENST00000543991 MMP20O60882 483 aa10.11□□□□□ -0.79
SMCO2-206ENST00000543991 CYP2E1P05181 493 aaPredicted RBP10.11□□□□□ -0.79
SMCO2-206ENST00000543991 RARAP10276 462 aa10.11□□□□□ -0.79
SMCO2-206ENST00000543991 EDN3P14138 238 aa10.11□□□□□ -0.79
SMCO2-206ENST00000543991 KIAA0319Q5VV43 1072 aa10.11□□□□□ -0.79
SMCO2-206ENST00000543991 NXPE4Q6UWF7 544 aa10.11□□□□□ -0.79
SMCO2-206ENST00000543991 PNMA5Q96PV4 448 aa10.11□□□□□ -0.79
SMCO2-206ENST00000543991 TGIF2Q9GZN2 237 aa10.11□□□□□ -0.79
SMCO2-206ENST00000543991 CUEDC1Q9NWM3 386 aaPredicted RBP10.11□□□□□ -0.79
SMCO2-206ENST00000543991 USP31Q70CQ4 1352 aa10.11□□□□□ -0.79
SMCO2-206ENST00000543991 PHF20L1A8MW92 1017 aa10.1□□□□□ -0.79
SMCO2-206ENST00000543991 USP17L7P0C7H9 530 aa10.1□□□□□ -0.79
SMCO2-206ENST00000543991 ZFATQ9P243 1243 aa10.1□□□□□ -0.79
SMCO2-206ENST00000543991 MAP3K6O95382 1288 aa10.09□□□□□ -0.79
SMCO2-206ENST00000543991 NFKB1P19838 968 aa10.09□□□□□ -0.79
SMCO2-206ENST00000543991 SPEM2Q0P670 501 aa10.09□□□□□ -0.79
SMCO2-206ENST00000543991 GRM2Q14416 872 aa10.09□□□□□ -0.79
SMCO2-206ENST00000543991 TAF1CQ15572 869 aaPredicted RBP10.09□□□□□ -0.79
SMCO2-206ENST00000543991 SREK1Q8WXA9 508 aaKnown RBP10.09□□□□□ -0.79
SMCO2-206ENST00000543991 PPP4R2Q9NY27 417 aa10.09□□□□□ -0.79
SMCO2-206ENST00000543991 KANSL3Q9P2N6 904 aa10.09□□□□□ -0.79
SMCO2-206ENST00000543991 SALL4Q9UJQ4 1053 aa10.09□□□□□ -0.79
SMCO2-206ENST00000543991 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.09□□□□□ -0.79
SMCO2-206ENST00000543991 A0A1W2PP55 124 aa10.08□□□□□ -0.8
SMCO2-206ENST00000543991 ST13P50502 369 aaKnown RBP10.08□□□□□ -0.8
SMCO2-206ENST00000543991 GRIN2CQ14957 1233 aa10.08□□□□□ -0.8
SMCO2-206ENST00000543991 ABHD17AQ96GS6 310 aa10.08□□□□□ -0.8
SMCO2-206ENST00000543991 TRIM47Q96LD4 638 aa10.08□□□□□ -0.8
SMCO2-206ENST00000543991 TLR7Q9NYK1 1049 aaKnown RBP10.08□□□□□ -0.8
SMCO2-206ENST00000543991 HCN2Q9UL51 889 aa10.08□□□□□ -0.8
SMCO2-206ENST00000543991 ATXN7L1Q9ULK2 861 aaPredicted RBP10.08□□□□□ -0.8
SMCO2-206ENST00000543991 TRAK1Q9UPV9 953 aa10.08□□□□□ -0.8
SMCO2-206ENST00000543991 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.08□□□□□ -0.8
SMCO2-206ENST00000543991 PSAPP07602 524 aa10.07□□□□□ -0.8
SMCO2-206ENST00000543991 ITGA6P23229 1130 aa10.07□□□□□ -0.8
SMCO2-206ENST00000543991 SOX18P35713 384 aa10.07□□□□□ -0.8
SMCO2-206ENST00000543991 PTPN12Q05209 780 aaKnown RBP10.07□□□□□ -0.8
SMCO2-206ENST00000543991 PEAR1Q5VY43 1037 aaPredicted RBP10.07□□□□□ -0.8
SMCO2-206ENST00000543991 ZNF837Q96EG3 531 aaPredicted RBP10.07□□□□□ -0.8
SMCO2-206ENST00000543991 DRC1Q96MC2 740 aa10.07□□□□□ -0.8
SMCO2-206ENST00000543991 EHD4Q9H223 541 aa10.07□□□□□ -0.8
SMCO2-206ENST00000543991 CCSER2Q9H7U1 834 aa10.07□□□□□ -0.8
SMCO2-206ENST00000543991 LATS2Q9NRM7 1088 aa10.07□□□□□ -0.8
SMCO2-206ENST00000543991 POTECB2RU33 542 aa10.06□□□□□ -0.8
SMCO2-206ENST00000543991 HOXD8P13378 290 aaPredicted RBP10.06□□□□□ -0.8
SMCO2-206ENST00000543991 CD33P20138 364 aa10.06□□□□□ -0.8
SMCO2-206ENST00000543991 GSTT1P30711 240 aa10.06□□□□□ -0.8
SMCO2-206ENST00000543991 MEI1Q5TIA1 1274 aa10.06□□□□□ -0.8
SMCO2-206ENST00000543991 GLIS3Q8NEA6 775 aa10.06□□□□□ -0.8
SMCO2-206ENST00000543991 GTPBP3Q969Y2 492 aaKnown RBP10.06□□□□□ -0.8
SMCO2-206ENST00000543991 SLC30A3Q99726 388 aa10.06□□□□□ -0.8
SMCO2-206ENST00000543991 KIF4AO95239 1232 aa10.05□□□□□ -0.8
SMCO2-206ENST00000543991 PLAURQ03405 335 aa10.05□□□□□ -0.8
SMCO2-206ENST00000543991 HYAL2Q12891 473 aa10.05□□□□□ -0.8
SMCO2-206ENST00000543991 FAM182BQ5T319 152 aa10.05□□□□□ -0.8
SMCO2-206ENST00000543991 HS2ST1Q7LGA3 356 aa10.05□□□□□ -0.8
SMCO2-206ENST00000543991 BHMTQ93088 406 aa10.05□□□□□ -0.8
SMCO2-206ENST00000543991 PHF24Q9UPV7 400 aa10.05□□□□□ -0.8
SMCO2-206ENST00000543991 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.05□□□□□ -0.8
SMCO2-206ENST00000543991 URB2Q14146 1524 aaKnown RBP10.05□□□□□ -0.8
SMCO2-206ENST00000543991 PRPF40BQ6NWY9 871 aaKnown RBP10.04□□□□□ -0.8
SMCO2-206ENST00000543991 NCAPG2Q86XI2 1143 aa10.04□□□□□ -0.8
SMCO2-206ENST00000543991 GGT7Q9UJ14 662 aa10.04□□□□□ -0.8
SMCO2-206ENST00000543991 DDX41Q9UJV9 622 aaKnown RBP10.04□□□□□ -0.8
SMCO2-206ENST00000543991 IFT140Q96RY7 1462 aa10.04□□□□□ -0.8
SMCO2-206ENST00000543991 ZNF608Q9ULD9 1512 aaPredicted RBP10.03□□□□□ -0.8
SMCO2-206ENST00000543991 FGFR3P22607 806 aa10.03□□□□□ -0.8
SMCO2-206ENST00000543991 NEUROD1Q13562 356 aa10.03□□□□□ -0.8
SMCO2-206ENST00000543991 SF3A1Q15459 793 aaKnown RBP10.03□□□□□ -0.8
SMCO2-206ENST00000543991 COL13A1Q5TAT6 717 aaPredicted RBP10.03□□□□□ -0.8
SMCO2-206ENST00000543991 DHX32Q7L7V1 743 aaKnown RBP10.03□□□□□ -0.8
SMCO2-206ENST00000543991 ZNF654Q8IZM8 581 aa10.03□□□□□ -0.8
SMCO2-206ENST00000543991 LIN7BQ9HAP6 207 aa10.03□□□□□ -0.8
SMCO2-206ENST00000543991 GMPR2Q9P2T1 348 aaKnown RBP10.03□□□□□ -0.8
SMCO2-206ENST00000543991 LOC105371045A0A1W2PR82 267 aa10.02□□□□□ -0.81
SMCO2-206ENST00000543991 ZNF394Q53GI3 561 aa10.02□□□□□ -0.81
SMCO2-206ENST00000543991 FOXR1Q6PIV2 292 aa10.02□□□□□ -0.81
SMCO2-206ENST00000543991 RAB44Q7Z6P3 723 aaPredicted RBP10.02□□□□□ -0.81
SMCO2-206ENST00000543991 USP48Q86UV5 1035 aa10.02□□□□□ -0.81
SMCO2-206ENST00000543991 C3orf58Q8NDZ4 430 aa10.02□□□□□ -0.81
SMCO2-206ENST00000543991 TINF2Q9BSI4 451 aa10.02□□□□□ -0.81
SMCO2-206ENST00000543991 ACBD3Q9H3P7 528 aa10.02□□□□□ -0.81
SMCO2-206ENST00000543991 XRCC5P13010 732 aaKnown RBP10.01□□□□□ -0.81
SMCO2-206ENST00000543991 NRLP54845 237 aa10.01□□□□□ -0.81
SMCO2-206ENST00000543991 CEP120Q8N960 986 aa10.01□□□□□ -0.81
SMCO2-206ENST00000543991 SLC43A3Q8NBI5 491 aa10.01□□□□□ -0.81
SMCO2-206ENST00000543991 TRERF1Q96PN7 1200 aa10.01□□□□□ -0.81
SMCO2-206ENST00000543991 TCF12Q99081 682 aa10.01□□□□□ -0.81
SMCO2-206ENST00000543991 OSMRQ99650 979 aa10.01□□□□□ -0.81
SMCO2-206ENST00000543991 ZKSCAN3Q9BRR0 538 aa10.01□□□□□ -0.81
SMCO2-206ENST00000543991 CAPN10Q9HC96 672 aa10.01□□□□□ -0.81
SMCO2-206ENST00000543991 TMEM238LA0A1B0GVL6 79 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms