RNA–Protein interactions for RNA: ENST00000543322.5

PTCD2-212, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2 BASIC

Gene PTCD2, Length 2,029 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-212ENST00000543322 MCMDC2Q4G0Z9 681 aa15.25■□□□□ 0.03
PTCD2-212ENST00000543322 CCDC129Q6ZRS4 1044 aa15.25■□□□□ 0.03
PTCD2-212ENST00000543322 RIOK3O14730 519 aaKnown RBP15.24■□□□□ 0.03
PTCD2-212ENST00000543322 PFKFB2O60825 505 aa15.24■□□□□ 0.03
PTCD2-212ENST00000543322 PHKG2P15735 406 aa15.24■□□□□ 0.03
PTCD2-212ENST00000543322 ANKRD13DQ6ZTN6 518 aa15.24■□□□□ 0.03
PTCD2-212ENST00000543322 CCDC186Q7Z3E2 898 aa15.24■□□□□ 0.03
PTCD2-212ENST00000543322 DBNDD2Q9BQY9 259 aa15.24■□□□□ 0.03
PTCD2-212ENST00000543322 TJP1Q07157 1748 aa15.24■□□□□ 0.03
PTCD2-212ENST00000543322 SPEF2Q9C093 1822 aa15.24■□□□□ 0.03
PTCD2-212ENST00000543322 H3BQV1 296 aa15.24■□□□□ 0.03
PTCD2-212ENST00000543322 CTIFO43310 598 aaKnown RBP15.24■□□□□ 0.03
PTCD2-212ENST00000543322 HSP90B1P14625 803 aaKnown RBP15.24■□□□□ 0.03
PTCD2-212ENST00000543322 CASP7P55210 303 aa15.24■□□□□ 0.03
PTCD2-212ENST00000543322 SCRN1Q12765 414 aa15.24■□□□□ 0.03
PTCD2-212ENST00000543322 IFFO2Q5TF58 517 aa15.24■□□□□ 0.03
PTCD2-212ENST00000543322 NAA16Q6N069 864 aaPredicted RBP15.24■□□□□ 0.03
PTCD2-212ENST00000543322 STOX1Q6ZVD7 989 aa15.24■□□□□ 0.03
PTCD2-212ENST00000543322 ZNF496Q96IT1 587 aaPredicted RBP15.24■□□□□ 0.03
PTCD2-212ENST00000543322 SEC62Q99442 399 aaKnown RBP15.24■□□□□ 0.03
PTCD2-212ENST00000543322 NUP188Q5SRE5 1749 aa15.24■□□□□ 0.03
PTCD2-212ENST00000543322 ADAMTSL3P82987 1691 aa15.24■□□□□ 0.03
PTCD2-212ENST00000543322 ZNF165P49910 485 aa15.23■□□□□ 0.03
PTCD2-212ENST00000543322 KBTBD3Q8NAB2 608 aa15.23■□□□□ 0.03
PTCD2-212ENST00000543322 NSUN7Q8NE18 718 aaKnown RBP15.23■□□□□ 0.03
PTCD2-212ENST00000543322 RAPGEF4Q8WZA2 1011 aa15.23■□□□□ 0.03
PTCD2-212ENST00000543322 DNAJC2Q99543 621 aaKnown RBP15.23■□□□□ 0.03
PTCD2-212ENST00000543322 DNAJC25Q9H1X3 360 aa15.23■□□□□ 0.03
PTCD2-212ENST00000543322 CFAP45Q9UL16 551 aa15.23■□□□□ 0.03
PTCD2-212ENST00000543322 CHGBP05060 677 aa15.22■□□□□ 0.03
PTCD2-212ENST00000543322 HMGB1P09429 215 aaKnown RBP15.22■□□□□ 0.03
PTCD2-212ENST00000543322 ADD1P35611 737 aaKnown RBP15.22■□□□□ 0.03
PTCD2-212ENST00000543322 ZSCAN25Q6NSZ9 544 aa15.22■□□□□ 0.03
PTCD2-212ENST00000543322 UBE3BQ7Z3V4 1068 aa15.22■□□□□ 0.03
PTCD2-212ENST00000543322 TICAM2Q86XR7 235 aa15.22■□□□□ 0.03
PTCD2-212ENST00000543322 ANKRD7Q92527 254 aa15.22■□□□□ 0.03
PTCD2-212ENST00000543322 TRIM5Q9C035 493 aa15.22■□□□□ 0.03
PTCD2-212ENST00000543322 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.22■□□□□ 0.036e-7■■□□□ 12.6
PTCD2-212ENST00000543322 NDUFB9Q9Y6M9 179 aa15.22■□□□□ 0.03
PTCD2-212ENST00000543322 SNRPA1P09661 255 aaKnown RBP15.22■□□□□ 0.03
PTCD2-212ENST00000543322 SARM1Q6SZW1 724 aa15.22■□□□□ 0.03
PTCD2-212ENST00000543322 NFATC2IPQ8NCF5 419 aa15.22■□□□□ 0.03
PTCD2-212ENST00000543322 ARID3AQ99856 593 aa15.22■□□□□ 0.03
PTCD2-212ENST00000543322 AGXT2Q9BYV1 514 aa15.22■□□□□ 0.03
PTCD2-212ENST00000543322 SALL1Q9NSC2 1324 aa15.21■□□□□ 0.03
PTCD2-212ENST00000543322 LRMPQ12912 555 aa15.21■□□□□ 0.03
PTCD2-212ENST00000543322 IQCB1Q15051 598 aa15.21■□□□□ 0.03
PTCD2-212ENST00000543322 LMOD2Q6P5Q4 547 aa15.21■□□□□ 0.03
PTCD2-212ENST00000543322 KRT28Q7Z3Y7 464 aa15.21■□□□□ 0.03
PTCD2-212ENST00000543322 DDX11Q96FC9 970 aa15.21■□□□□ 0.03
PTCD2-212ENST00000543322 NRBP1Q9UHY1 535 aa15.21■□□□□ 0.03
PTCD2-212ENST00000543322 RCOR1Q9UKL0 485 aa15.21■□□□□ 0.03
PTCD2-212ENST00000543322 TMEM94Q12767 1356 aa15.21■□□□□ 0.03
PTCD2-212ENST00000543322 C1orf167Q5SNV9 1468 aa15.21■□□□□ 0.02
PTCD2-212ENST00000543322 FAM177BA6PVY3 158 aa15.21■□□□□ 0.02
PTCD2-212ENST00000543322 CTAGE5O15320 804 aa15.21■□□□□ 0.02
PTCD2-212ENST00000543322 TATP17735 454 aaPredicted RBP15.21■□□□□ 0.02
PTCD2-212ENST00000543322 DDX46Q7L014 1031 aaKnown RBP15.21■□□□□ 0.02
PTCD2-212ENST00000543322 DHX32Q7L7V1 743 aaKnown RBP15.21■□□□□ 0.02
PTCD2-212ENST00000543322 DSCC1Q9BVC3 393 aa15.21■□□□□ 0.02
PTCD2-212ENST00000543322 HELLSQ9NRZ9 838 aa15.21■□□□□ 0.02
PTCD2-212ENST00000543322 USP16Q9Y5T5 823 aa15.21■□□□□ 0.02
PTCD2-212ENST00000543322 CTDNEP1O95476 244 aa15.2■□□□□ 0.02
PTCD2-212ENST00000543322 STX1AQ16623 288 aa15.2■□□□□ 0.02
PTCD2-212ENST00000543322 ATL3Q6DD88 541 aa15.2■□□□□ 0.02
PTCD2-212ENST00000543322 DRC7Q8IY82 874 aa15.2■□□□□ 0.02
PTCD2-212ENST00000543322 LRRC2Q9BYS8 371 aa15.2■□□□□ 0.02
PTCD2-212ENST00000543322 DDX60Q8IY21 1712 aaKnown RBP15.19■□□□□ 0.02
PTCD2-212ENST00000543322 PTPDC1A2A3K4 754 aa15.19■□□□□ 0.02
PTCD2-212ENST00000543322 EXOSC10Q01780 885 aaKnown RBP15.19■□□□□ 0.02
PTCD2-212ENST00000543322 IFNL2Q8IZJ0 200 aa15.19■□□□□ 0.02
PTCD2-212ENST00000543322 FMNL2Q96PY5 1086 aa15.19■□□□□ 0.02
PTCD2-212ENST00000543322 GPR108Q9NPR9 543 aa15.19■□□□□ 0.02
PTCD2-212ENST00000543322 CLIP2Q9UDT6 1046 aa15.19■□□□□ 0.02
PTCD2-212ENST00000543322 PRDM4Q9UKN5 801 aa15.19■□□□□ 0.02
PTCD2-212ENST00000543322 A0A087WZG4 1122 aa15.19■□□□□ 0.02
PTCD2-212ENST00000543322 SMTNL1A8MU46 457 aa15.19■□□□□ 0.02
PTCD2-212ENST00000543322 SYCP1Q15431 976 aa15.19■□□□□ 0.02
PTCD2-212ENST00000543322 ZMYM1Q5SVZ6 1142 aa15.19■□□□□ 0.02
PTCD2-212ENST00000543322 C11orf57Q6ZUT1 292 aaPredicted RBP15.19■□□□□ 0.02
PTCD2-212ENST00000543322 TTC5Q8N0Z6 440 aa15.19■□□□□ 0.02
PTCD2-212ENST00000543322 MRFAP1L1Q96HT8 127 aa15.19■□□□□ 0.02
PTCD2-212ENST00000543322 GOLPH3LQ9H4A5 285 aa15.19■□□□□ 0.02
PTCD2-212ENST00000543322 CCDC144BQ3MJ40 725 aa15.18■□□□□ 0.02
PTCD2-212ENST00000543322 CCAR1Q8IX12 1150 aaKnown RBP15.18■□□□□ 0.02
PTCD2-212ENST00000543322 CCDC144CPQ8IYA2 1237 aa15.18■□□□□ 0.02
PTCD2-212ENST00000543322 PLBD2Q8NHP8 589 aa15.18■□□□□ 0.02
PTCD2-212ENST00000543322 CACTINQ8WUQ7 758 aaKnown RBP15.18■□□□□ 0.02
PTCD2-212ENST00000543322 DCAF5Q96JK2 942 aa15.18■□□□□ 0.02
PTCD2-212ENST00000543322 PAG1Q9NWQ8 432 aa15.18■□□□□ 0.02
PTCD2-212ENST00000543322 NLRP2Q9NX02 1062 aa15.18■□□□□ 0.02
PTCD2-212ENST00000543322 UBR2Q8IWV8 1755 aa15.18■□□□□ 0.02
PTCD2-212ENST00000543322 PIP4K2AP48426 406 aaPredicted RBP15.17■□□□□ 0.02
PTCD2-212ENST00000543322 FGD1P98174 961 aa15.17■□□□□ 0.02
PTCD2-212ENST00000543322 FOXO4P98177 505 aa15.17■□□□□ 0.02
PTCD2-212ENST00000543322 APOBRQ0VD83 1088 aa15.17■□□□□ 0.02
PTCD2-212ENST00000543322 SNW1Q13573 536 aaKnown RBP15.17■□□□□ 0.02
PTCD2-212ENST00000543322 ATG9AQ7Z3C6 839 aa15.17■□□□□ 0.02
PTCD2-212ENST00000543322 PDCL2Q8N4E4 241 aa15.17■□□□□ 0.02
PTCD2-212ENST00000543322 ATP5J2-PTCD1G3V325 749 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms