RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 SPTLC3Q9NUV7 552 aa19.65■□□□□ 0.74
KDM2B-216ENST00000543025 CCDC9Q9Y3X0 531 aaKnown RBP19.65■□□□□ 0.74
KDM2B-216ENST00000543025 KDM6AO15550 1401 aaPredicted RBP19.65■□□□□ 0.74
KDM2B-216ENST00000543025 RFX7Q2KHR2 1363 aa19.65■□□□□ 0.74
KDM2B-216ENST00000543025 SCN11AQ9UI33 1791 aa19.64■□□□□ 0.74
KDM2B-216ENST00000543025 LIG1P18858 919 aa19.64■□□□□ 0.74
KDM2B-216ENST00000543025 HMGN5P82970 282 aaKnown RBP19.64■□□□□ 0.74
KDM2B-216ENST00000543025 TNNI3KQ59H18 835 aa19.64■□□□□ 0.74
KDM2B-216ENST00000543025 EDC3Q96F86 508 aaKnown RBP19.64■□□□□ 0.74
KDM2B-216ENST00000543025 SPATA32Q96LK8 384 aa19.64■□□□□ 0.74
KDM2B-216ENST00000543025 DBNLQ9UJU6 430 aaKnown RBP19.64■□□□□ 0.74
KDM2B-216ENST00000543025 FPGT-TNNI3KV9GXZ4 949 aa19.64■□□□□ 0.74
KDM2B-216ENST00000543025 GOLGA6L4A6NEF3 574 aa19.64■□□□□ 0.73
KDM2B-216ENST00000543025 STK3Q13188 491 aa19.64■□□□□ 0.73
KDM2B-216ENST00000543025 ANKRD13DQ6ZTN6 518 aa19.64■□□□□ 0.73
KDM2B-216ENST00000543025 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.64■□□□□ 0.738e-7■□□□□ 11.3
KDM2B-216ENST00000543025 CHMP3Q9Y3E7 222 aa19.64■□□□□ 0.73
KDM2B-216ENST00000543025 GOLGA6L6A8MZA4 724 aa19.63■□□□□ 0.73
KDM2B-216ENST00000543025 NFATC2IPQ8NCF5 419 aa19.63■□□□□ 0.73
KDM2B-216ENST00000543025 RFX5P48382 616 aaPredicted RBP19.63■□□□□ 0.73
KDM2B-216ENST00000543025 PTPN12Q05209 780 aaKnown RBP19.63■□□□□ 0.73
KDM2B-216ENST00000543025 NEK1Q96PY6 1258 aa19.63■□□□□ 0.73
KDM2B-216ENST00000543025 PHKG2P15735 406 aa19.62■□□□□ 0.73
KDM2B-216ENST00000543025 TYRO3Q06418 890 aa19.62■□□□□ 0.73
KDM2B-216ENST00000543025 CAMK4Q16566 473 aa19.62■□□□□ 0.73
KDM2B-216ENST00000543025 GTF3C6Q969F1 213 aa19.62■□□□□ 0.73
KDM2B-216ENST00000543025 TNMDQ9H2S6 317 aa19.62■□□□□ 0.73
KDM2B-216ENST00000543025 DDX19AQ9NUU7 478 aaKnown RBP19.62■□□□□ 0.73
KDM2B-216ENST00000543025 THRAP3Q9Y2W1 955 aaKnown RBP19.62■□□□□ 0.73
KDM2B-216ENST00000543025 COL15A1P39059 1388 aa19.62■□□□□ 0.73
KDM2B-216ENST00000543025 TFCP2Q12800 502 aa19.62■□□□□ 0.73
KDM2B-216ENST00000543025 LEO1Q8WVC0 666 aaPredicted RBP19.62■□□□□ 0.73
KDM2B-216ENST00000543025 ZNF496Q96IT1 587 aaPredicted RBP19.62■□□□□ 0.73
KDM2B-216ENST00000543025 DACT1Q9NYF0 836 aa19.62■□□□□ 0.73
KDM2B-216ENST00000543025 MRVI1Q9Y6F6 885 aa19.62■□□□□ 0.73
KDM2B-216ENST00000543025 GLI3P10071 1580 aa19.61■□□□□ 0.73
KDM2B-216ENST00000543025 RABL6Q3YEC7 729 aaPredicted RBP19.61■□□□□ 0.73
KDM2B-216ENST00000543025 LRP10Q7Z4F1 713 aa19.61■□□□□ 0.73
KDM2B-216ENST00000543025 ATRNO75882 1429 aa19.61■□□□□ 0.73
KDM2B-216ENST00000543025 C17orf53Q8N3J3 647 aaPredicted RBP19.61■□□□□ 0.73
KDM2B-216ENST00000543025 ZCRB1Q8TBF4 217 aaKnown RBP19.61■□□□□ 0.73
KDM2B-216ENST00000543025 U3KPZ7 1027 aaPredicted RBP19.61■□□□□ 0.73
KDM2B-216ENST00000543025 SNRPA1P09661 255 aaKnown RBP19.6■□□□□ 0.73
KDM2B-216ENST00000543025 TFIP11Q9UBB9 837 aaKnown RBP19.6■□□□□ 0.73
KDM2B-216ENST00000543025 TTC5Q8N0Z6 440 aa19.6■□□□□ 0.73
KDM2B-216ENST00000543025 KIAA1524Q8TCG1 905 aa19.6■□□□□ 0.73
KDM2B-216ENST00000543025 KCNF1Q9H3M0 494 aa19.6■□□□□ 0.73
KDM2B-216ENST00000543025 ZNF609O15014 1411 aa19.59■□□□□ 0.73
KDM2B-216ENST00000543025 CYP27B1O15528 508 aa19.59■□□□□ 0.73
KDM2B-216ENST00000543025 RBM43Q6ZSC3 357 aaKnown RBP19.59■□□□□ 0.73
KDM2B-216ENST00000543025 UBE3BQ7Z3V4 1068 aa19.59■□□□□ 0.73
KDM2B-216ENST00000543025 USP16Q9Y5T5 823 aa19.59■□□□□ 0.73
KDM2B-216ENST00000543025 GTF2F1P35269 517 aaKnown RBP eCLIP19.59■□□□□ 0.733e-7■■■■■ 29.2
KDM2B-216ENST00000543025 MCMDC2Q4G0Z9 681 aa19.59■□□□□ 0.73
KDM2B-216ENST00000543025 BARGINQ6ZT62 677 aa19.59■□□□□ 0.73
KDM2B-216ENST00000543025 Q6ZUG5 572 aa19.59■□□□□ 0.73
KDM2B-216ENST00000543025 IFNL2Q8IZJ0 200 aa19.59■□□□□ 0.73
KDM2B-216ENST00000543025 SPC24Q8NBT2 197 aa19.59■□□□□ 0.73
KDM2B-216ENST00000543025 DNAJC2Q99543 621 aaKnown RBP19.59■□□□□ 0.73
KDM2B-216ENST00000543025 PCDH11XQ9BZA7 1347 aa19.59■□□□□ 0.73
KDM2B-216ENST00000543025 PCDH11YQ9BZA8 1340 aa19.59■□□□□ 0.73
KDM2B-216ENST00000543025 AFDNP55196 1824 aaKnown RBP19.58■□□□□ 0.73
KDM2B-216ENST00000543025 JAK2O60674 1132 aa19.58■□□□□ 0.73
KDM2B-216ENST00000543025 CKAP2LQ8IYA6 745 aa19.58■□□□□ 0.73
KDM2B-216ENST00000543025 JARID2Q92833 1246 aaPredicted RBP19.58■□□□□ 0.73
KDM2B-216ENST00000543025 HAUS7Q99871 368 aa19.58■□□□□ 0.73
KDM2B-216ENST00000543025 CLSTN2Q9H4D0 955 aa19.58■□□□□ 0.73
KDM2B-216ENST00000543025 TNS2Q63HR2 1409 aa19.58■□□□□ 0.73
KDM2B-216ENST00000543025 CYP21A2P08686 494 aa19.58■□□□□ 0.72
KDM2B-216ENST00000543025 HSP90B1P14625 803 aaKnown RBP19.58■□□□□ 0.72
KDM2B-216ENST00000543025 LUZP1Q86V48 1076 aa19.58■□□□□ 0.72
KDM2B-216ENST00000543025 DBNDD2Q9BQY9 259 aa19.58■□□□□ 0.72
KDM2B-216ENST00000543025 NDUFB9Q9Y6M9 179 aa19.58■□□□□ 0.72
KDM2B-216ENST00000543025 ANO6Q4KMQ2 910 aa19.57■□□□□ 0.72
KDM2B-216ENST00000543025 BRF1Q92994 677 aa19.57■□□□□ 0.72
KDM2B-216ENST00000543025 CDCA7Q9BWT1 371 aaPredicted RBP19.57■□□□□ 0.72
KDM2B-216ENST00000543025 ZSCAN16Q9H4T2 348 aaPredicted RBP19.57■□□□□ 0.72
KDM2B-216ENST00000543025 THSD7AQ9UPZ6 1657 aa19.57■□□□□ 0.72
KDM2B-216ENST00000543025 RESTQ13127 1097 aa19.57■□□□□ 0.72
KDM2B-216ENST00000543025 CCDC129Q6ZRS4 1044 aa19.57■□□□□ 0.72
KDM2B-216ENST00000543025 BICD2Q8TD16 824 aa19.57■□□□□ 0.72
KDM2B-216ENST00000543025 TRPC5Q9UL62 973 aaPredicted RBP19.57■□□□□ 0.72
KDM2B-216ENST00000543025 A0A087WZG4 1122 aa19.56■□□□□ 0.72
KDM2B-216ENST00000543025 H3BQV1 296 aa19.56■□□□□ 0.72
KDM2B-216ENST00000543025 FAM98CQ17RN3 349 aaKnown RBP19.56■□□□□ 0.72
KDM2B-216ENST00000543025 IFFO2Q5TF58 517 aa19.56■□□□□ 0.72
KDM2B-216ENST00000543025 FMNL2Q96PY5 1086 aa19.56■□□□□ 0.72
KDM2B-216ENST00000543025 SEC62Q99442 399 aaKnown RBP19.56■□□□□ 0.72
KDM2B-216ENST00000543025 PYCARDQ9ULZ3 195 aa19.56■□□□□ 0.72
KDM2B-216ENST00000543025 ARFGEF2Q9Y6D5 1785 aa19.56■□□□□ 0.72
KDM2B-216ENST00000543025 PIP4K2AP48426 406 aaPredicted RBP19.56■□□□□ 0.72
KDM2B-216ENST00000543025 DCAF5Q96JK2 942 aa19.56■□□□□ 0.72
KDM2B-216ENST00000543025 PGBD1Q96JS3 809 aa19.56■□□□□ 0.72
KDM2B-216ENST00000543025 CBX8Q9HC52 389 aa19.56■□□□□ 0.72
KDM2B-216ENST00000543025 NR1I2O75469 434 aa19.55■□□□□ 0.72
KDM2B-216ENST00000543025 KBTBD3Q8NAB2 608 aa19.55■□□□□ 0.72
KDM2B-216ENST00000543025 GJD4Q96KN9 370 aaPredicted RBP19.55■□□□□ 0.72
KDM2B-216ENST00000543025 CFAP45Q9UL16 551 aa19.55■□□□□ 0.72
KDM2B-216ENST00000543025 SH3TC1Q8TE82 1336 aa19.55■□□□□ 0.72
KDM2B-216ENST00000543025 HMGB1P09429 215 aaKnown RBP19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms