RNA–Protein interactions for RNA: ENST00000542841.1

SRGAP1-205, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 836 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-205ENST00000542841 ZNF157P51786 506 aaPredicted RBP14.74□□□□□ -0.05
SRGAP1-205ENST00000542841 SOX10P56693 466 aa14.74□□□□□ -0.05
SRGAP1-205ENST00000542841 KIF23Q02241 960 aaPredicted RBP14.74□□□□□ -0.05
SRGAP1-205ENST00000542841 DLK2Q6UY11 383 aa14.74□□□□□ -0.05
SRGAP1-205ENST00000542841 SAMD7Q7Z3H4 446 aa14.74□□□□□ -0.05
SRGAP1-205ENST00000542841 LRP10Q7Z4F1 713 aa14.74□□□□□ -0.05
SRGAP1-205ENST00000542841 DCPSQ96C86 337 aaKnown RBP14.74□□□□□ -0.05
SRGAP1-205ENST00000542841 TRMT112Q9UI30 125 aaKnown RBP14.74□□□□□ -0.05
SRGAP1-205ENST00000542841 PSMD14O00487 310 aa14.73□□□□□ -0.05
SRGAP1-205ENST00000542841 PDIA6Q15084 440 aa14.73□□□□□ -0.05
SRGAP1-205ENST00000542841 WASHC4Q2M389 1173 aa14.73□□□□□ -0.05
SRGAP1-205ENST00000542841 TBC1D10BQ4KMP7 808 aaPredicted RBP14.73□□□□□ -0.05
SRGAP1-205ENST00000542841 NLRP10Q86W26 655 aa14.73□□□□□ -0.05
SRGAP1-205ENST00000542841 TSR2Q969E8 191 aaKnown RBP14.73□□□□□ -0.05
SRGAP1-205ENST00000542841 MBIPQ9NS73 344 aa14.73□□□□□ -0.05
SRGAP1-205ENST00000542841 RNF186Q9NXI6 227 aa14.73□□□□□ -0.05
SRGAP1-205ENST00000542841 TSPYL4Q9UJ04 414 aa14.73□□□□□ -0.05
SRGAP1-205ENST00000542841 SH3TC1Q8TE82 1336 aa14.72□□□□□ -0.05
SRGAP1-205ENST00000542841 RPS12P25398 132 aaKnown RBP14.72□□□□□ -0.05
SRGAP1-205ENST00000542841 EXOSC9Q06265 439 aaKnown RBP14.72□□□□□ -0.05
SRGAP1-205ENST00000542841 ALDH1L2Q3SY69 923 aa14.72□□□□□ -0.05
SRGAP1-205ENST00000542841 ANKRD36CQ5JPF3 1778 aa14.72□□□□□ -0.05
SRGAP1-205ENST00000542841 CACNA1FO60840 1977 aa14.71□□□□□ -0.05
SRGAP1-205ENST00000542841 ADM5C9JUS6 153 aa14.71□□□□□ -0.05
SRGAP1-205ENST00000542841 EGFRP00533 1210 aa14.71□□□□□ -0.05
SRGAP1-205ENST00000542841 ANXA1P04083 346 aa14.71□□□□□ -0.05
SRGAP1-205ENST00000542841 RARSP54136 660 aaKnown RBP14.71□□□□□ -0.05
SRGAP1-205ENST00000542841 AIMP1Q12904 312 aaKnown RBP14.71□□□□□ -0.05
SRGAP1-205ENST00000542841 PROSER3Q2NL68 480 aa14.71□□□□□ -0.05
SRGAP1-205ENST00000542841 RBM26Q5T8P6 1007 aaKnown RBP14.71□□□□□ -0.05
SRGAP1-205ENST00000542841 DBNDD1Q9H9R9 158 aa14.71□□□□□ -0.05
SRGAP1-205ENST00000542841 NSFL1CQ9UNZ2 370 aaKnown RBP14.71□□□□□ -0.05
SRGAP1-205ENST00000542841 PDE4DIPQ5VU43 2346 aa14.71□□□□□ -0.05
SRGAP1-205ENST00000542841 DUOX1Q9NRD9 1551 aa14.7□□□□□ -0.06
SRGAP1-205ENST00000542841 SLC10A3P09131 477 aa14.7□□□□□ -0.06
SRGAP1-205ENST00000542841 TCIRG1Q13488 830 aa14.7□□□□□ -0.06
SRGAP1-205ENST00000542841 PRPF38BQ5VTL8 546 aaKnown RBP14.7□□□□□ -0.06
SRGAP1-205ENST00000542841 COPS6Q7L5N1 327 aa14.7□□□□□ -0.06
SRGAP1-205ENST00000542841 CTU1Q7Z7A3 348 aaKnown RBP14.7□□□□□ -0.06
SRGAP1-205ENST00000542841 SULF1Q8IWU6 871 aa14.7□□□□□ -0.06
SRGAP1-205ENST00000542841 REM2Q8IYK8 340 aaPredicted RBP14.7□□□□□ -0.06
SRGAP1-205ENST00000542841 LAS1LQ9Y4W2 734 aaKnown RBP14.7□□□□□ -0.06
SRGAP1-205ENST00000542841 LAMB2P55268 1798 aa14.7□□□□□ -0.06
SRGAP1-205ENST00000542841 C6orf229H3BNL8 230 aa14.69□□□□□ -0.06
SRGAP1-205ENST00000542841 RIMBP2O15034 1052 aa14.69□□□□□ -0.06
SRGAP1-205ENST00000542841 KIF4BQ2VIQ3 1234 aa14.69□□□□□ -0.06
SRGAP1-205ENST00000542841 XAGE3Q8WTP9 111 aa14.69□□□□□ -0.06
SRGAP1-205ENST00000542841 CSRNP1Q96S65 589 aa14.69□□□□□ -0.06
SRGAP1-205ENST00000542841 EYA3Q99504 573 aa14.69□□□□□ -0.06
SRGAP1-205ENST00000542841 ECE2O60344 883 aa14.68□□□□□ -0.06
SRGAP1-205ENST00000542841 CHMP4AQ9BY43 222 aa14.68□□□□□ -0.06
SRGAP1-205ENST00000542841 POLLQ9UGP5 575 aa14.68□□□□□ -0.06
SRGAP1-205ENST00000542841 VAMP4O75379 141 aa14.67□□□□□ -0.06
SRGAP1-205ENST00000542841 MS4A1P11836 297 aa14.67□□□□□ -0.06
SRGAP1-205ENST00000542841 DOK7Q18PE1 504 aa14.67□□□□□ -0.06
SRGAP1-205ENST00000542841 TWISTNBQ3B726 338 aaPredicted RBP14.67□□□□□ -0.06
SRGAP1-205ENST00000542841 NECTIN2Q92692 538 aa14.67□□□□□ -0.06
SRGAP1-205ENST00000542841 CELF1Q92879 486 aaKnown RBP14.67□□□□□ -0.06
SRGAP1-205ENST00000542841 KCNQ5Q9NR82 932 aa14.67□□□□□ -0.06
SRGAP1-205ENST00000542841 GGA3Q9NZ52 723 aa14.67□□□□□ -0.06
SRGAP1-205ENST00000542841 RTL9Q8NET4 1388 aa14.67□□□□□ -0.06
SRGAP1-205ENST00000542841 KIF16BQ96L93 1317 aa14.66□□□□□ -0.06
SRGAP1-205ENST00000542841 LRRC37AA6NMS7 1700 aa14.66□□□□□ -0.06
SRGAP1-205ENST00000542841 AKAP11Q9UKA4 1901 aa14.66□□□□□ -0.06
SRGAP1-205ENST00000542841 GPSM2P81274 684 aa14.66□□□□□ -0.06
SRGAP1-205ENST00000542841 PDE3AQ14432 1141 aa14.66□□□□□ -0.06
SRGAP1-205ENST00000542841 PKN2Q16513 984 aaKnown RBP14.66□□□□□ -0.06
SRGAP1-205ENST00000542841 CDCA5Q96FF9 252 aa14.66□□□□□ -0.06
SRGAP1-205ENST00000542841 TAF1P21675 1872 aa14.65□□□□□ -0.06
SRGAP1-205ENST00000542841 VIL1P09327 827 aaKnown RBP14.65□□□□□ -0.06
SRGAP1-205ENST00000542841 HOXB7P09629 217 aa14.65□□□□□ -0.06
SRGAP1-205ENST00000542841 SF3B3Q15393 1217 aaKnown RBP14.65□□□□□ -0.06
SRGAP1-205ENST00000542841 RASAL3Q86YV0 1011 aa14.65□□□□□ -0.06
SRGAP1-205ENST00000542841 ZC3H12CQ9C0D7 883 aaKnown RBP14.65□□□□□ -0.06
SRGAP1-205ENST00000542841 HDAC9Q9UKV0 1011 aa14.65□□□□□ -0.06
SRGAP1-205ENST00000542841 HPS5Q9UPZ3 1129 aa14.65□□□□□ -0.06
SRGAP1-205ENST00000542841 POLR2AP24928 1970 aaKnown RBP14.64□□□□□ -0.07
SRGAP1-205ENST00000542841 G3V3G9 751 aa14.64□□□□□ -0.07
SRGAP1-205ENST00000542841 BCAR3O75815 825 aa14.64□□□□□ -0.07
SRGAP1-205ENST00000542841 FKBP1BP68106 108 aa14.64□□□□□ -0.07
SRGAP1-205ENST00000542841 DCAF8Q5TAQ9 597 aa14.64□□□□□ -0.07
SRGAP1-205ENST00000542841 TBC1D16Q8TBP0 767 aa14.64□□□□□ -0.07
SRGAP1-205ENST00000542841 FAM89AQ96GI7 184 aa14.64□□□□□ -0.07
SRGAP1-205ENST00000542841 IPO8O15397 1037 aaKnown RBP14.63□□□□□ -0.07
SRGAP1-205ENST00000542841 SCARF1Q14162 830 aa14.63□□□□□ -0.07
SRGAP1-205ENST00000542841 ANGEL2Q5VTE6 544 aaKnown RBP14.63□□□□□ -0.07
SRGAP1-205ENST00000542841 SMC4Q9NTJ3 1288 aa14.63□□□□□ -0.07
SRGAP1-205ENST00000542841 PPP4R2Q9NY27 417 aa14.63□□□□□ -0.07
SRGAP1-205ENST00000542841 ASTN2O75129 1339 aaPredicted RBP14.63□□□□□ -0.07
SRGAP1-205ENST00000542841 RPS8P62241 208 aaKnown RBP14.62□□□□□ -0.07
SRGAP1-205ENST00000542841 AAMPQ13685 434 aa14.62□□□□□ -0.07
SRGAP1-205ENST00000542841 ZKSCAN2Q63HK3 967 aa14.62□□□□□ -0.07
SRGAP1-205ENST00000542841 ANKRD13DQ6ZTN6 518 aa14.62□□□□□ -0.07
SRGAP1-205ENST00000542841 DDX60Q8IY21 1712 aaKnown RBP14.62□□□□□ -0.07
SRGAP1-205ENST00000542841 C8orf58Q8NAV2 365 aa14.62□□□□□ -0.07
SRGAP1-205ENST00000542841 PLBD2Q8NHP8 589 aa14.62□□□□□ -0.07
SRGAP1-205ENST00000542841 SSH1Q8WYL5 1049 aa14.62□□□□□ -0.07
SRGAP1-205ENST00000542841 ARHGAP45Q92619 1136 aa14.62□□□□□ -0.07
SRGAP1-205ENST00000542841 ZNF280AP59817 542 aaPredicted RBP14.61□□□□□ -0.07
SRGAP1-205ENST00000542841 RTL5Q5HYW3 569 aaPredicted RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms