RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 MRC1P22897 1456 aa15.19■□□□□ 0.02
DDX11-223ENST00000542838 TFCP2Q12800 502 aa15.19■□□□□ 0.02
DDX11-223ENST00000542838 TNNI3KQ59H18 835 aa15.19■□□□□ 0.02
DDX11-223ENST00000542838 ZNF592Q92610 1267 aa15.19■□□□□ 0.02
DDX11-223ENST00000542838 RBM33Q96EV2 1170 aaKnown RBP15.19■□□□□ 0.02
DDX11-223ENST00000542838 FPGT-TNNI3KV9GXZ4 949 aa15.19■□□□□ 0.02
DDX11-223ENST00000542838 ZNF609O15014 1411 aa15.19■□□□□ 0.02
DDX11-223ENST00000542838 STX1AQ16623 288 aa15.19■□□□□ 0.02
DDX11-223ENST00000542838 ESCO1Q5FWF5 840 aa15.19■□□□□ 0.02
DDX11-223ENST00000542838 SARM1Q6SZW1 724 aa15.19■□□□□ 0.02
DDX11-223ENST00000542838 LRRC8AQ8IWT6 810 aa15.19■□□□□ 0.02
DDX11-223ENST00000542838 CTAGE5O15320 804 aa15.18■□□□□ 0.02
DDX11-223ENST00000542838 SMARCC2Q8TAQ2 1214 aa15.18■□□□□ 0.02
DDX11-223ENST00000542838 ANKRD24Q8TF21 1146 aa15.18■□□□□ 0.02
DDX11-223ENST00000542838 XAGE3Q8WTP9 111 aa15.18■□□□□ 0.02
DDX11-223ENST00000542838 FEZ1Q99689 392 aa15.18■□□□□ 0.02
DDX11-223ENST00000542838 BECN2A8MW95 431 aa15.18■□□□□ 0.02
DDX11-223ENST00000542838 SLC39A6Q13433 755 aa15.18■□□□□ 0.02
DDX11-223ENST00000542838 MCMDC2Q4G0Z9 681 aa15.18■□□□□ 0.02
DDX11-223ENST00000542838 CEP135Q66GS9 1140 aa15.18■□□□□ 0.02
DDX11-223ENST00000542838 FTOQ9C0B1 505 aaKnown RBP eCLIP15.18■□□□□ 0.02
DDX11-223ENST00000542838 COPRSQ9NQ92 184 aa15.18■□□□□ 0.02
DDX11-223ENST00000542838 ADD1P35611 737 aaKnown RBP15.18■□□□□ 0.02
DDX11-223ENST00000542838 NAA30Q147X3 362 aaPredicted RBP15.18■□□□□ 0.02
DDX11-223ENST00000542838 ARID5BQ14865 1188 aa15.18■□□□□ 0.02
DDX11-223ENST00000542838 COPS6Q7L5N1 327 aa15.18■□□□□ 0.02
DDX11-223ENST00000542838 MRFAP1L1Q96HT8 127 aa15.18■□□□□ 0.02
DDX11-223ENST00000542838 RCOR1Q9UKL0 485 aa15.18■□□□□ 0.02
DDX11-223ENST00000542838 SIPA1L3O60292 1781 aaPredicted RBP15.17■□□□□ 0.02
DDX11-223ENST00000542838 CCDC73Q6ZRK6 1079 aa15.17■□□□□ 0.02
DDX11-223ENST00000542838 NSUN7Q8NE18 718 aaKnown RBP15.17■□□□□ 0.02
DDX11-223ENST00000542838 LLPHQ9BRT6 129 aaKnown RBP15.17■□□□□ 0.02
DDX11-223ENST00000542838 METTL22Q9BUU2 404 aaPredicted RBP15.17■□□□□ 0.02
DDX11-223ENST00000542838 GOLPH3LQ9H4A5 285 aa15.17■□□□□ 0.02
DDX11-223ENST00000542838 MYH15Q9Y2K3 1946 aa15.17■□□□□ 0.02
DDX11-223ENST00000542838 NEMFO60524 1076 aa15.17■□□□□ 0.02
DDX11-223ENST00000542838 PFKFB2O60825 505 aa15.17■□□□□ 0.02
DDX11-223ENST00000542838 GCP02774 474 aa15.17■□□□□ 0.02
DDX11-223ENST00000542838 PTPN12Q05209 780 aaKnown RBP15.17■□□□□ 0.02
DDX11-223ENST00000542838 DBNDD2Q9BQY9 259 aa15.17■□□□□ 0.02
DDX11-223ENST00000542838 PHRF1Q9P1Y6 1649 aaKnown RBP15.16■□□□□ 0.02
DDX11-223ENST00000542838 STOX1Q6ZVD7 989 aa15.16■□□□□ 0.02
DDX11-223ENST00000542838 DDX46Q7L014 1031 aaKnown RBP15.16■□□□□ 0.02
DDX11-223ENST00000542838 ARHGEF25Q86VW2 580 aa15.16■□□□□ 0.02
DDX11-223ENST00000542838 OGFRQ9NZT2 677 aa15.16■□□□□ 0.02
DDX11-223ENST00000542838 RFX5P48382 616 aaPredicted RBP15.16■□□□□ 0.02
DDX11-223ENST00000542838 NAA16Q6N069 864 aaPredicted RBP15.16■□□□□ 0.02
DDX11-223ENST00000542838 CGNQ9P2M7 1197 aaKnown RBP15.16■□□□□ 0.02
DDX11-223ENST00000542838 RFX7Q2KHR2 1363 aa15.16■□□□□ 0.02
DDX11-223ENST00000542838 A0A087WWV3 80 aa15.15■□□□□ 0.02
DDX11-223ENST00000542838 PTPDC1A2A3K4 754 aa15.15■□□□□ 0.02
DDX11-223ENST00000542838 KINO60870 393 aaKnown RBP15.15■□□□□ 0.02
DDX11-223ENST00000542838 APOBRQ0VD83 1088 aa15.15■□□□□ 0.02
DDX11-223ENST00000542838 ZNF790Q6PG37 636 aa15.15■□□□□ 0.02
DDX11-223ENST00000542838 USP28Q96RU2 1077 aa15.15■□□□□ 0.02
DDX11-223ENST00000542838 BCL11BQ9C0K0 894 aaPredicted RBP15.15■□□□□ 0.02
DDX11-223ENST00000542838 CCDC9Q9Y3X0 531 aaKnown RBP15.15■□□□□ 0.02
DDX11-223ENST00000542838 USP27XA6NNY8 438 aa15.15■□□□□ 0.02
DDX11-223ENST00000542838 SKILP12757 684 aa15.15■□□□□ 0.02
DDX11-223ENST00000542838 RBM6P78332 1123 aaKnown RBP15.15■□□□□ 0.02
DDX11-223ENST00000542838 CCT2P78371 535 aaKnown RBP15.15■□□□□ 0.02
DDX11-223ENST00000542838 DHX32Q7L7V1 743 aaKnown RBP15.15■□□□□ 0.02
DDX11-223ENST00000542838 FILIP1Q7Z7B0 1213 aa15.15■□□□□ 0.02
DDX11-223ENST00000542838 ZNF396Q96N95 335 aaPredicted RBP15.15■□□□□ 0.02
DDX11-223ENST00000542838 HAUS7Q99871 368 aa15.15■□□□□ 0.02
DDX11-223ENST00000542838 CTNNA3Q9UI47 895 aa15.15■□□□□ 0.02
DDX11-223ENST00000542838 NAP1L2Q9ULW6 460 aaPredicted RBP15.15■□□□□ 0.02
DDX11-223ENST00000542838 USP16Q9Y5T5 823 aa15.15■□□□□ 0.02
DDX11-223ENST00000542838 LAMA4Q16363 1823 aa15.15■□□□□ 0.02
DDX11-223ENST00000542838 CTDNEP1O95476 244 aa15.15■□□□□ 0.02
DDX11-223ENST00000542838 HMGB1P09429 215 aaKnown RBP15.15■□□□□ 0.02
DDX11-223ENST00000542838 SNW1Q13573 536 aaKnown RBP15.15■□□□□ 0.02
DDX11-223ENST00000542838 LMOD2Q6P5Q4 547 aa15.15■□□□□ 0.02
DDX11-223ENST00000542838 ANO10Q9NW15 660 aa15.15■□□□□ 0.02
DDX11-223ENST00000542838 PTPN14Q15678 1187 aa15.14■□□□□ 0.01
DDX11-223ENST00000542838 DHX40Q8IX18 779 aaKnown RBP15.14■□□□□ 0.01
DDX11-223ENST00000542838 CCDC69A6NI79 296 aa15.14■□□□□ 0.01
DDX11-223ENST00000542838 ANKRD13DQ6ZTN6 518 aa15.14■□□□□ 0.01
DDX11-223ENST00000542838 UBE3BQ7Z3V4 1068 aa15.14■□□□□ 0.01
DDX11-223ENST00000542838 C5P01031 1676 aa15.14■□□□□ 0.01
DDX11-223ENST00000542838 PPFIA3O75145 1194 aa15.13■□□□□ 0.01
DDX11-223ENST00000542838 GUCY1B3Q02153 619 aa15.13■□□□□ 0.01
DDX11-223ENST00000542838 FAM160A1Q05DH4 1040 aa15.13■□□□□ 0.01
DDX11-223ENST00000542838 FSIP1Q8NA03 581 aa15.13■□□□□ 0.01
DDX11-223ENST00000542838 KIF20AO95235 890 aa15.13■□□□□ 0.01
DDX11-223ENST00000542838 ME1P48163 572 aa15.13■□□□□ 0.01
DDX11-223ENST00000542838 KBTBD3Q8NAB2 608 aa15.13■□□□□ 0.01
DDX11-223ENST00000542838 FBXW7Q969H0 707 aa15.13■□□□□ 0.01
DDX11-223ENST00000542838 PIP4K2AP48426 406 aaPredicted RBP15.13■□□□□ 0.01
DDX11-223ENST00000542838 CEP57L1Q8IYX8 460 aa15.13■□□□□ 0.01
DDX11-223ENST00000542838 AOPEPQ8N6M6 819 aa15.13■□□□□ 0.01
DDX11-223ENST00000542838 ENGASEQ8NFI3 743 aa15.13■□□□□ 0.01
DDX11-223ENST00000542838 ERCC4Q92889 916 aaPredicted RBP15.13■□□□□ 0.01
DDX11-223ENST00000542838 NCOA5Q9HCD5 579 aaKnown RBP15.13■□□□□ 0.01
DDX11-223ENST00000542838 TRMT1Q9NXH9 659 aaKnown RBP15.13■□□□□ 0.01
DDX11-223ENST00000542838 IGSF3O75054 1194 aa15.12■□□□□ 0.01
DDX11-223ENST00000542838 ATL3Q6DD88 541 aa15.12■□□□□ 0.01
DDX11-223ENST00000542838 AXIN2Q9Y2T1 843 aa15.12■□□□□ 0.01
DDX11-223ENST00000542838 SH3TC1Q8TE82 1336 aa15.12■□□□□ 0.01
DDX11-223ENST00000542838 CCZ1BP86790 482 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms