RNA–Protein interactions for RNA: ENST00000542714.5

CHFR-221, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-221ENST00000542714 A0A1B0GUL7 405 aa16.24■□□□□ 0.19
CHFR-221ENST00000542714 CDC45O75419 566 aa16.24■□□□□ 0.19
CHFR-221ENST00000542714 MSL1Q68DK7 614 aa16.24■□□□□ 0.19
CHFR-221ENST00000542714 TBC1D9Q6ZT07 1266 aa16.24■□□□□ 0.19
CHFR-221ENST00000542714 CELF1Q92879 486 aaKnown RBP16.24■□□□□ 0.19
CHFR-221ENST00000542714 GPATCH3Q96I76 525 aa16.24■□□□□ 0.19
CHFR-221ENST00000542714 CDC5LQ99459 802 aaKnown RBP16.24■□□□□ 0.19
CHFR-221ENST00000542714 AKAP11Q9UKA4 1901 aa16.23■□□□□ 0.19
CHFR-221ENST00000542714 MROH5Q6ZUA9 1318 aa16.23■□□□□ 0.19
CHFR-221ENST00000542714 NPHP1O15259 732 aa16.23■□□□□ 0.19
CHFR-221ENST00000542714 GLRX3O76003 335 aaKnown RBP16.23■□□□□ 0.19
CHFR-221ENST00000542714 ADORA1P30542 326 aa16.23■□□□□ 0.19
CHFR-221ENST00000542714 IGHMBP2P38935 993 aaKnown RBP16.23■□□□□ 0.19
CHFR-221ENST00000542714 TIMM10P62072 90 aa16.23■□□□□ 0.19
CHFR-221ENST00000542714 ST5P78524 1137 aa16.23■□□□□ 0.19
CHFR-221ENST00000542714 LRRC37AA6NMS7 1700 aa16.22■□□□□ 0.19
CHFR-221ENST00000542714 ERC2O15083 957 aa16.22■□□□□ 0.19
CHFR-221ENST00000542714 MAP4K4O95819 1239 aaPredicted RBP16.22■□□□□ 0.19
CHFR-221ENST00000542714 MMP10P09238 476 aa16.22■□□□□ 0.19
CHFR-221ENST00000542714 ATP2B3Q16720 1220 aa16.22■□□□□ 0.19
CHFR-221ENST00000542714 ANKRD18AQ8IVF6 992 aa16.22■□□□□ 0.19
CHFR-221ENST00000542714 MPHOSPH8Q99549 860 aa16.22■□□□□ 0.19
CHFR-221ENST00000542714 AKAP2Q9Y2D5 859 aa16.22■□□□□ 0.19
CHFR-221ENST00000542714 KLRG2A4D1S0 409 aaPredicted RBP16.21■□□□□ 0.19
CHFR-221ENST00000542714 PDE8BO95263 885 aa16.21■□□□□ 0.19
CHFR-221ENST00000542714 ATP5JP18859 108 aa16.21■□□□□ 0.19
CHFR-221ENST00000542714 FGFR2P21802 821 aa16.21■□□□□ 0.19
CHFR-221ENST00000542714 CRY2Q49AN0 593 aa16.21■□□□□ 0.19
CHFR-221ENST00000542714 HELBQ8NG08 1087 aaPredicted RBP16.21■□□□□ 0.19
CHFR-221ENST00000542714 NEUROD6Q96NK8 337 aa16.21■□□□□ 0.19
CHFR-221ENST00000542714 PDGFDQ9GZP0 370 aaPredicted RBP16.21■□□□□ 0.19
CHFR-221ENST00000542714 TRIM6-TRIM34B2RNG4 842 aa16.2■□□□□ 0.18
CHFR-221ENST00000542714 CHRNDQ07001 517 aa16.2■□□□□ 0.18
CHFR-221ENST00000542714 XAGE2Q96GT9 111 aa16.2■□□□□ 0.18
CHFR-221ENST00000542714 BSDC1Q9NW68 430 aaPredicted RBP16.2■□□□□ 0.18
CHFR-221ENST00000542714 CACNA1SQ13698 1873 aa16.2■□□□□ 0.18
CHFR-221ENST00000542714 TAF5LO75529 589 aa16.19■□□□□ 0.18
CHFR-221ENST00000542714 RPS8P62241 208 aaKnown RBP16.19■□□□□ 0.18
CHFR-221ENST00000542714 PUM3Q15397 648 aaKnown RBP16.19■□□□□ 0.18
CHFR-221ENST00000542714 DDX46Q7L014 1031 aaKnown RBP16.19■□□□□ 0.18
CHFR-221ENST00000542714 RILPL2Q969X0 211 aa16.19■□□□□ 0.18
CHFR-221ENST00000542714 BOLA2Q9H3K6 86 aa16.19■□□□□ 0.18
CHFR-221ENST00000542714 PARP3Q9Y6F1 533 aa16.19■□□□□ 0.18
CHFR-221ENST00000542714 MYH7P12883 1935 aa16.18■□□□□ 0.18
CHFR-221ENST00000542714 SNAP23O00161 211 aa16.18■□□□□ 0.18
CHFR-221ENST00000542714 SLC51AQ86UW1 340 aa16.18■□□□□ 0.18
CHFR-221ENST00000542714 CNTROBQ8N137 903 aa16.18■□□□□ 0.18
CHFR-221ENST00000542714 UPF1Q92900 1129 aaKnown RBP eCLIP16.18■□□□□ 0.18
CHFR-221ENST00000542714 MINPP1Q9UNW1 487 aa16.18■□□□□ 0.18
CHFR-221ENST00000542714 LTBP1Q14766 1721 aa16.18■□□□□ 0.18
CHFR-221ENST00000542714 MYO5AQ9Y4I1 1855 aaKnown RBP16.18■□□□□ 0.18
CHFR-221ENST00000542714 CHMLP26374 656 aa16.17■□□□□ 0.18
CHFR-221ENST00000542714 HOXA10P31260 410 aaPredicted RBP16.17■□□□□ 0.18
CHFR-221ENST00000542714 GRAPQ13588 217 aa16.17■□□□□ 0.18
CHFR-221ENST00000542714 GRAPLQ8TC17 118 aaPredicted RBP16.17■□□□□ 0.18
CHFR-221ENST00000542714 LPIN2Q92539 896 aa16.17■□□□□ 0.18
CHFR-221ENST00000542714 RPGRQ92834 1020 aaKnown RBP16.17■□□□□ 0.18
CHFR-221ENST00000542714 HAUS7Q99871 368 aa16.17■□□□□ 0.18
CHFR-221ENST00000542714 BRIP1Q9BX63 1249 aa16.17■□□□□ 0.18
CHFR-221ENST00000542714 DLEC1Q9Y238 1755 aa16.16■□□□□ 0.18
CHFR-221ENST00000542714 MFAP1P55081 439 aaKnown RBP16.16■□□□□ 0.18
CHFR-221ENST00000542714 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.16■□□□□ 0.18
CHFR-221ENST00000542714 EDC3Q96F86 508 aaKnown RBP16.16■□□□□ 0.18
CHFR-221ENST00000542714 NDUFB9Q9Y6M9 179 aa16.16■□□□□ 0.18
CHFR-221ENST00000542714 KIF13BQ9NQT8 1826 aa16.16■□□□□ 0.18
CHFR-221ENST00000542714 MYH13Q9UKX3 1938 aa16.15■□□□□ 0.18
CHFR-221ENST00000542714 DOCK2Q92608 1830 aa16.15■□□□□ 0.18
CHFR-221ENST00000542714 WTIPA6NIX2 430 aaPredicted RBP16.15■□□□□ 0.18
CHFR-221ENST00000542714 SLC5A1P13866 664 aa16.15■□□□□ 0.18
CHFR-221ENST00000542714 EVI5LQ96CN4 794 aa16.15■□□□□ 0.18
CHFR-221ENST00000542714 RBM17Q96I25 401 aaKnown RBP16.15■□□□□ 0.18
CHFR-221ENST00000542714 SCARF1Q14162 830 aa16.14■□□□□ 0.17
CHFR-221ENST00000542714 TTC39AQ5SRH9 613 aa16.14■□□□□ 0.17
CHFR-221ENST00000542714 CRAMP1Q96RY5 1269 aa16.14■□□□□ 0.17
CHFR-221ENST00000542714 C10orf71Q711Q0 1435 aa16.13■□□□□ 0.17
CHFR-221ENST00000542714 IFIT1P09914 478 aaKnown RBP16.13■□□□□ 0.17
CHFR-221ENST00000542714 ARID4AP29374 1257 aaPredicted RBP16.13■□□□□ 0.17
CHFR-221ENST00000542714 PHKA1P46020 1223 aa16.13■□□□□ 0.17
CHFR-221ENST00000542714 UBE4AQ14139 1066 aa16.13■□□□□ 0.17
CHFR-221ENST00000542714 CCDC158Q5M9N0 1113 aa16.13■□□□□ 0.17
CHFR-221ENST00000542714 GORABQ5T7V8 394 aa16.13■□□□□ 0.17
CHFR-221ENST00000542714 CASC1Q6TDU7 716 aa16.13■□□□□ 0.17
CHFR-221ENST00000542714 SLC16A10Q8TF71 515 aa16.13■□□□□ 0.17
CHFR-221ENST00000542714 ZNF512BQ96KM6 892 aaPredicted RBP16.13■□□□□ 0.17
CHFR-221ENST00000542714 TBC1D32Q96NH3 1257 aa16.13■□□□□ 0.17
CHFR-221ENST00000542714 DNAJC2Q99543 621 aaKnown RBP16.13■□□□□ 0.17
CHFR-221ENST00000542714 ESYT1Q9BSJ8 1104 aa16.13■□□□□ 0.17
CHFR-221ENST00000542714 IL25Q9H293 177 aa16.13■□□□□ 0.17
CHFR-221ENST00000542714 KIAA1551Q9HCM1 1747 aa16.13■□□□□ 0.17
CHFR-221ENST00000542714 RFX7Q2KHR2 1363 aa16.13■□□□□ 0.17
CHFR-221ENST00000542714 SRGNP10124 158 aa16.12■□□□□ 0.17
CHFR-221ENST00000542714 PDE6BP35913 854 aa16.12■□□□□ 0.17
CHFR-221ENST00000542714 CCDC102BQ68D86 513 aa16.12■□□□□ 0.17
CHFR-221ENST00000542714 ANKRD2Q9GZV1 360 aa16.12■□□□□ 0.17
CHFR-221ENST00000542714 IRS2Q9Y4H2 1338 aa16.12■□□□□ 0.17
CHFR-221ENST00000542714 SLX4Q8IY92 1834 aa16.11■□□□□ 0.17
CHFR-221ENST00000542714 KLRK1P26718 216 aa16.11■□□□□ 0.17
CHFR-221ENST00000542714 MCAMP43121 646 aa16.11■□□□□ 0.17
CHFR-221ENST00000542714 PI16Q6UXB8 463 aa16.11■□□□□ 0.17
CHFR-221ENST00000542714 FSD1Q9BTV5 496 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms