RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 TTC16Q8NEE8 873 aa7.9□□□□□ -1.14
CPSF7-220ENST00000541963 TMC1Q8TDI8 760 aa7.9□□□□□ -1.14
CPSF7-220ENST00000541963 IFT43Q96FT9 208 aa7.9□□□□□ -1.14
CPSF7-220ENST00000541963 ZDHHC3Q9NYG2 299 aa7.9□□□□□ -1.14
CPSF7-220ENST00000541963 ANKIB1Q9P2G1 1089 aa7.9□□□□□ -1.14
CPSF7-220ENST00000541963 UNC13BO14795 1591 aa7.89□□□□□ -1.15
CPSF7-220ENST00000541963 EFCAB6Q5THR3 1501 aa7.89□□□□□ -1.15
CPSF7-220ENST00000541963 FIGNL2A6NMB9 653 aa7.89□□□□□ -1.15
CPSF7-220ENST00000541963 PCSK2P16519 638 aa7.89□□□□□ -1.15
CPSF7-220ENST00000541963 SMCPP49901 116 aaPredicted RBP7.89□□□□□ -1.15
CPSF7-220ENST00000541963 NBPF10Q6P3W6 841 aaKnown RBP7.89□□□□□ -1.15
CPSF7-220ENST00000541963 RNF217Q8TC41 542 aa7.89□□□□□ -1.15
CPSF7-220ENST00000541963 TIMMDC1Q9NPL8 285 aa7.89□□□□□ -1.15
CPSF7-220ENST00000541963 FAM13BQ9NYF5 915 aa7.89□□□□□ -1.15
CPSF7-220ENST00000541963 GPC6Q9Y625 555 aaPredicted RBP7.89□□□□□ -1.15
CPSF7-220ENST00000541963 TET3O43151 1660 aa7.89□□□□□ -1.15
CPSF7-220ENST00000541963 NPHP4O75161 1426 aaPredicted RBP7.88□□□□□ -1.15
CPSF7-220ENST00000541963 NOS1P29475 1434 aa7.88□□□□□ -1.15
CPSF7-220ENST00000541963 TXLNAP40222 546 aa7.88□□□□□ -1.15
CPSF7-220ENST00000541963 EIF1AXP47813 144 aaKnown RBP7.88□□□□□ -1.15
CPSF7-220ENST00000541963 ARHGAP4P98171 946 aa7.88□□□□□ -1.15
CPSF7-220ENST00000541963 ARSJQ5FYB0 599 aaPredicted RBP7.88□□□□□ -1.15
CPSF7-220ENST00000541963 ZNF295-AS1Q8N0V1 137 aa7.88□□□□□ -1.15
CPSF7-220ENST00000541963 CITED4Q96RK1 184 aa7.88□□□□□ -1.15
CPSF7-220ENST00000541963 BCL11AQ9H165 835 aa7.88□□□□□ -1.15
CPSF7-220ENST00000541963 LRFN2Q9ULH4 789 aa7.88□□□□□ -1.15
CPSF7-220ENST00000541963 GJA3Q9Y6H8 435 aa7.88□□□□□ -1.15
CPSF7-220ENST00000541963 GCC2Q8IWJ2 1684 aa7.88□□□□□ -1.15
CPSF7-220ENST00000541963 HFM1A2PYH4 1435 aa7.87□□□□□ -1.15
CPSF7-220ENST00000541963 NAIPQ13075 1403 aa7.87□□□□□ -1.15
CPSF7-220ENST00000541963 POLR1AO95602 1720 aaPredicted RBP7.87□□□□□ -1.15
CPSF7-220ENST00000541963 A0A1B0GTH6 734 aa7.87□□□□□ -1.15
CPSF7-220ENST00000541963 ANKRD33BA6NCL7 494 aa7.87□□□□□ -1.15
CPSF7-220ENST00000541963 TNFRSF10BO14763 440 aa7.87□□□□□ -1.15
CPSF7-220ENST00000541963 BMP1P13497 986 aa7.87□□□□□ -1.15
CPSF7-220ENST00000541963 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.87□□□□□ -1.15
CPSF7-220ENST00000541963 KLK14Q9P0G3 267 aa7.87□□□□□ -1.15
CPSF7-220ENST00000541963 IQGAP3Q86VI3 1631 aa7.87□□□□□ -1.15
CPSF7-220ENST00000541963 MED14O60244 1454 aa7.87□□□□□ -1.15
CPSF7-220ENST00000541963 UBR1Q8IWV7 1749 aa7.86□□□□□ -1.15
CPSF7-220ENST00000541963 TMEM2Q9UHN6 1383 aa7.86□□□□□ -1.15
CPSF7-220ENST00000541963 ZNF335Q9H4Z2 1342 aaPredicted RBP7.86□□□□□ -1.15
CPSF7-220ENST00000541963 RHOQP17081 205 aa7.86□□□□□ -1.15
CPSF7-220ENST00000541963 RBM25P49756 843 aaKnown RBP7.86□□□□□ -1.15
CPSF7-220ENST00000541963 PDE3BQ13370 1112 aa7.86□□□□□ -1.15
CPSF7-220ENST00000541963 PGBD3Q8N328 593 aa7.86□□□□□ -1.15
CPSF7-220ENST00000541963 ASB16Q96NS5 453 aa7.86□□□□□ -1.15
CPSF7-220ENST00000541963 KDM5AP29375 1690 aaKnown RBP7.86□□□□□ -1.15
CPSF7-220ENST00000541963 PIK3C2BO00750 1634 aa7.85□□□□□ -1.15
CPSF7-220ENST00000541963 SOS2Q07890 1332 aaPredicted RBP7.85□□□□□ -1.15
CPSF7-220ENST00000541963 SLIT1O75093 1534 aa7.85□□□□□ -1.15
CPSF7-220ENST00000541963 MAN1A2O60476 641 aa7.85□□□□□ -1.15
CPSF7-220ENST00000541963 RPLP1P05386 114 aaKnown RBP7.85□□□□□ -1.15
CPSF7-220ENST00000541963 LTKP29376 864 aa7.85□□□□□ -1.15
CPSF7-220ENST00000541963 USP5P45974 858 aa7.85□□□□□ -1.15
CPSF7-220ENST00000541963 ECM1Q16610 540 aa7.85□□□□□ -1.15
CPSF7-220ENST00000541963 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.85□□□□□ -1.15
CPSF7-220ENST00000541963 DNAJC14Q6Y2X3 702 aaPredicted RBP7.85□□□□□ -1.15
CPSF7-220ENST00000541963 ZFP42Q96MM3 310 aa7.85□□□□□ -1.15
CPSF7-220ENST00000541963 IQSEC2Q5JU85 1478 aa7.85□□□□□ -1.15
CPSF7-220ENST00000541963 SCAF11Q99590 1463 aaKnown RBP7.85□□□□□ -1.15
CPSF7-220ENST00000541963 E9PCH4 1651 aa7.84□□□□□ -1.15
CPSF7-220ENST00000541963 ARHGAP23Q9P227 1491 aa7.84□□□□□ -1.15
CPSF7-220ENST00000541963 MSX1P28360 303 aa7.84□□□□□ -1.15
CPSF7-220ENST00000541963 ZAP70P43403 619 aa7.84□□□□□ -1.15
CPSF7-220ENST00000541963 DNM1Q05193 864 aaKnown RBP7.84□□□□□ -1.15
CPSF7-220ENST00000541963 ZNF326Q5BKZ1 582 aaKnown RBP7.84□□□□□ -1.15
CPSF7-220ENST00000541963 TRIM46Q7Z4K8 759 aa7.84□□□□□ -1.15
CPSF7-220ENST00000541963 TREML1Q86YW5 311 aa7.84□□□□□ -1.15
CPSF7-220ENST00000541963 RGL4Q8IZJ4 473 aa7.84□□□□□ -1.15
CPSF7-220ENST00000541963 CRIPAKQ8N1N5 446 aa7.84□□□□□ -1.15
CPSF7-220ENST00000541963 BCL2L13Q9BXK5 485 aa7.84□□□□□ -1.15
CPSF7-220ENST00000541963 RBCK1Q9BYM8 510 aa7.84□□□□□ -1.15
CPSF7-220ENST00000541963 SYNMO15061 1565 aa7.84□□□□□ -1.15
CPSF7-220ENST00000541963 CPS1P31327 1500 aa7.83□□□□□ -1.16
CPSF7-220ENST00000541963 IQGAP1P46940 1657 aa7.83□□□□□ -1.16
CPSF7-220ENST00000541963 LTBP4Q8N2S1 1624 aa7.83□□□□□ -1.16
CPSF7-220ENST00000541963 TOM1O60784 492 aa7.83□□□□□ -1.16
CPSF7-220ENST00000541963 MICAL2O94851 1124 aa7.83□□□□□ -1.16
CPSF7-220ENST00000541963 MZF1P28698 734 aaPredicted RBP7.83□□□□□ -1.16
CPSF7-220ENST00000541963 PIK3R5Q8WYR1 880 aa7.83□□□□□ -1.16
CPSF7-220ENST00000541963 SUSD3Q96L08 255 aa7.83□□□□□ -1.16
CPSF7-220ENST00000541963 DMRTB1Q96MA1 342 aa7.83□□□□□ -1.16
CPSF7-220ENST00000541963 NEURL4Q96JN8 1562 aa7.83□□□□□ -1.16
CPSF7-220ENST00000541963 ADGRB3O60242 1522 aa7.83□□□□□ -1.16
CPSF7-220ENST00000541963 E9PSI1 815 aa7.82□□□□□ -1.16
CPSF7-220ENST00000541963 UBAP1LF5GYI3 381 aa7.82□□□□□ -1.16
CPSF7-220ENST00000541963 TGFBR3LH3BV60 316 aa7.82□□□□□ -1.16
CPSF7-220ENST00000541963 F11P03951 625 aa7.82□□□□□ -1.16
CPSF7-220ENST00000541963 PLCB3Q01970 1234 aa7.82□□□□□ -1.16
CPSF7-220ENST00000541963 ETFBKMTQ8IXQ9 262 aa7.82□□□□□ -1.16
CPSF7-220ENST00000541963 EDEM1Q92611 657 aa7.82□□□□□ -1.16
CPSF7-220ENST00000541963 GAS2L1Q99501 681 aaPredicted RBP7.82□□□□□ -1.16
CPSF7-220ENST00000541963 MPHOSPH9Q99550 1183 aa7.82□□□□□ -1.16
CPSF7-220ENST00000541963 SETD5Q9C0A6 1442 aa7.82□□□□□ -1.16
CPSF7-220ENST00000541963 CCDC87Q9NVE4 849 aa7.82□□□□□ -1.16
CPSF7-220ENST00000541963 DYRK1BQ9Y463 629 aa7.82□□□□□ -1.16
CPSF7-220ENST00000541963 RIMS2Q9UQ26 1411 aa7.81□□□□□ -1.16
CPSF7-220ENST00000541963 ZBTB39O15060 712 aa7.81□□□□□ -1.16
CPSF7-220ENST00000541963 FZD6O60353 706 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms