RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 LRRN4CLQ8ND94 238 aa12.2□□□□□ -0.46
CDC42SE1-207ENST00000540998 ORAI2Q96SN7 254 aa12.2□□□□□ -0.46
CDC42SE1-207ENST00000540998 DDX19AQ9NUU7 478 aaKnown RBP12.2□□□□□ -0.46
CDC42SE1-207ENST00000540998 IQCB1Q15051 598 aa12.2□□□□□ -0.46
CDC42SE1-207ENST00000540998 PLEKHO1Q53GL0 409 aaPredicted RBP12.2□□□□□ -0.46
CDC42SE1-207ENST00000540998 BABAM1Q9NWV8 329 aa12.2□□□□□ -0.46
CDC42SE1-207ENST00000540998 NEURL1BA8MQ27 555 aa12.2□□□□□ -0.46
CDC42SE1-207ENST00000540998 ADD1P35611 737 aaKnown RBP12.2□□□□□ -0.46
CDC42SE1-207ENST00000540998 ZC3H6P61129 1189 aaKnown RBP12.2□□□□□ -0.46
CDC42SE1-207ENST00000540998 AOPEPQ8N6M6 819 aa12.2□□□□□ -0.46
CDC42SE1-207ENST00000540998 ZNF215Q9UL58 517 aaPredicted RBP12.2□□□□□ -0.46
CDC42SE1-207ENST00000540998 TBX22Q9Y458 520 aa12.2□□□□□ -0.46
CDC42SE1-207ENST00000540998 A0A0U1RQG5 324 aaPredicted RBP12.19□□□□□ -0.46
CDC42SE1-207ENST00000540998 NFATC2IPQ8NCF5 419 aa12.19□□□□□ -0.46
CDC42SE1-207ENST00000540998 ANKRD24Q8TF21 1146 aa12.19□□□□□ -0.46
CDC42SE1-207ENST00000540998 ZBTB9Q96C00 473 aa12.19□□□□□ -0.46
CDC42SE1-207ENST00000540998 NEUROD6Q96NK8 337 aa12.19□□□□□ -0.46
CDC42SE1-207ENST00000540998 A0A1B0GVL5 298 aa12.19□□□□□ -0.46
CDC42SE1-207ENST00000540998 PTPDC1A2A3K4 754 aa12.19□□□□□ -0.46
CDC42SE1-207ENST00000540998 GOLGA6L19H0YKK7 550 aa12.19□□□□□ -0.46
CDC42SE1-207ENST00000540998 GOLIM4O00461 696 aa12.19□□□□□ -0.46
CDC42SE1-207ENST00000540998 TIMM10P62072 90 aa12.19□□□□□ -0.46
CDC42SE1-207ENST00000540998 GCKRQ14397 625 aa12.19□□□□□ -0.46
CDC42SE1-207ENST00000540998 CCDC112Q8NEF3 446 aa12.19□□□□□ -0.46
CDC42SE1-207ENST00000540998 SKILP12757 684 aa12.18□□□□□ -0.46
CDC42SE1-207ENST00000540998 HAND2P61296 217 aa12.18□□□□□ -0.46
CDC42SE1-207ENST00000540998 TNNI3KQ59H18 835 aa12.18□□□□□ -0.46
CDC42SE1-207ENST00000540998 CEP135Q66GS9 1140 aa12.18□□□□□ -0.46
CDC42SE1-207ENST00000540998 LRRC8AQ8IWT6 810 aa12.18□□□□□ -0.46
CDC42SE1-207ENST00000540998 FPGT-TNNI3KV9GXZ4 949 aa12.18□□□□□ -0.46
CDC42SE1-207ENST00000540998 KDM3BQ7LBC6 1761 aa12.18□□□□□ -0.46
CDC42SE1-207ENST00000540998 CCDC69A6NI79 296 aa12.18□□□□□ -0.46
CDC42SE1-207ENST00000540998 HOXB7P09629 217 aa12.18□□□□□ -0.46
CDC42SE1-207ENST00000540998 ME1P48163 572 aa12.18□□□□□ -0.46
CDC42SE1-207ENST00000540998 PTPN12Q05209 780 aaKnown RBP12.18□□□□□ -0.46
CDC42SE1-207ENST00000540998 RBM43Q6ZSC3 357 aaKnown RBP12.18□□□□□ -0.46
CDC42SE1-207ENST00000540998 ILDR1Q86SU0 546 aaPredicted RBP12.18□□□□□ -0.46
CDC42SE1-207ENST00000540998 NSUN7Q8NE18 718 aaKnown RBP12.18□□□□□ -0.46
CDC42SE1-207ENST00000540998 POLR3DP05423 398 aaPredicted RBP12.18□□□□□ -0.46
CDC42SE1-207ENST00000540998 ANKRD1Q15327 319 aa12.18□□□□□ -0.46
CDC42SE1-207ENST00000540998 DHX40Q8IX18 779 aaKnown RBP12.18□□□□□ -0.46
CDC42SE1-207ENST00000540998 ZNF496Q96IT1 587 aaPredicted RBP12.18□□□□□ -0.46
CDC42SE1-207ENST00000540998 BECN2A8MW95 431 aa12.17□□□□□ -0.46
CDC42SE1-207ENST00000540998 SNW1Q13573 536 aaKnown RBP12.17□□□□□ -0.46
CDC42SE1-207ENST00000540998 ELF2Q15723 593 aa12.17□□□□□ -0.46
CDC42SE1-207ENST00000540998 FSIP1Q8NA03 581 aa12.17□□□□□ -0.46
CDC42SE1-207ENST00000540998 ZNF594Q96JF6 807 aaPredicted RBP12.17□□□□□ -0.46
CDC42SE1-207ENST00000540998 CCDC85AQ96PX6 553 aaPredicted RBP12.17□□□□□ -0.46
CDC42SE1-207ENST00000540998 DDX21Q9NR30 783 aaKnown RBP eCLIP12.17□□□□□ -0.46
CDC42SE1-207ENST00000540998 CTNNA3Q9UI47 895 aa12.17□□□□□ -0.46
CDC42SE1-207ENST00000540998 MED1Q15648 1581 aaPredicted RBP12.17□□□□□ -0.46
CDC42SE1-207ENST00000540998 SMTNL1A8MU46 457 aa12.17□□□□□ -0.46
CDC42SE1-207ENST00000540998 GCP02774 474 aa12.17□□□□□ -0.46
CDC42SE1-207ENST00000540998 GOLGA8FQ08AF8 430 aa12.17□□□□□ -0.46
CDC42SE1-207ENST00000540998 GOLGA8DPQ0D2H9 430 aa12.17□□□□□ -0.46
CDC42SE1-207ENST00000540998 DDX17Q92841 729 aaKnown RBP12.17□□□□□ -0.46
CDC42SE1-207ENST00000540998 SNRKQ9NRH2 765 aa12.17□□□□□ -0.46
CDC42SE1-207ENST00000540998 TPM3P06753 285 aa12.16□□□□□ -0.46
CDC42SE1-207ENST00000540998 HIP1O00291 1037 aa12.16□□□□□ -0.46
CDC42SE1-207ENST00000540998 CCZ1BP86790 482 aa12.16□□□□□ -0.46
CDC42SE1-207ENST00000540998 CCZ1P86791 482 aaPredicted RBP12.16□□□□□ -0.46
CDC42SE1-207ENST00000540998 DPCR1Q3MIW9 517 aa12.16□□□□□ -0.46
CDC42SE1-207ENST00000540998 KMT5BQ4FZB7 885 aa12.16□□□□□ -0.46
CDC42SE1-207ENST00000540998 DDX58O95786 925 aaKnown RBP12.15□□□□□ -0.46
CDC42SE1-207ENST00000540998 RFX5P48382 616 aaPredicted RBP12.15□□□□□ -0.46
CDC42SE1-207ENST00000540998 HSP90AA4PQ58FG1 418 aa12.15□□□□□ -0.46
CDC42SE1-207ENST00000540998 ZNF790Q6PG37 636 aa12.15□□□□□ -0.46
CDC42SE1-207ENST00000540998 ZNF771Q7L3S4 317 aaPredicted RBP12.15□□□□□ -0.46
CDC42SE1-207ENST00000540998 A0A087WZG4 1122 aa12.15□□□□□ -0.46
CDC42SE1-207ENST00000540998 ZBTB22O15209 634 aa12.15□□□□□ -0.46
CDC42SE1-207ENST00000540998 NEXNQ0ZGT2 675 aa12.15□□□□□ -0.46
CDC42SE1-207ENST00000540998 GORABQ5T7V8 394 aa12.15□□□□□ -0.46
CDC42SE1-207ENST00000540998 LMBR1LQ6UX01 489 aa12.15□□□□□ -0.46
CDC42SE1-207ENST00000540998 DENND2AQ9ULE3 1009 aa12.15□□□□□ -0.46
CDC42SE1-207ENST00000540998 ERBB3P21860 1342 aa12.15□□□□□ -0.47
CDC42SE1-207ENST00000540998 NDUFA8P51970 172 aa12.14□□□□□ -0.47
CDC42SE1-207ENST00000540998 USPL1Q5W0Q7 1092 aa12.14□□□□□ -0.47
CDC42SE1-207ENST00000540998 STK11IPQ8N1F8 1099 aa12.14□□□□□ -0.47
CDC42SE1-207ENST00000540998 CLIC4Q9Y696 253 aa12.14□□□□□ -0.47
CDC42SE1-207ENST00000540998 KINO60870 393 aaKnown RBP12.14□□□□□ -0.47
CDC42SE1-207ENST00000540998 MCMDC2Q4G0Z9 681 aa12.14□□□□□ -0.47
CDC42SE1-207ENST00000540998 CCDC73Q6ZRK6 1079 aa12.14□□□□□ -0.47
CDC42SE1-207ENST00000540998 NBPF11Q86T75 865 aa12.14□□□□□ -0.47
CDC42SE1-207ENST00000540998 NKX2-3Q8TAU0 364 aa12.14□□□□□ -0.47
CDC42SE1-207ENST00000540998 TMX1Q9H3N1 280 aa12.14□□□□□ -0.47
CDC42SE1-207ENST00000540998 SMC2O95347 1197 aa12.14□□□□□ -0.47
CDC42SE1-207ENST00000540998 ATP5JP18859 108 aa12.14□□□□□ -0.47
CDC42SE1-207ENST00000540998 PTPN14Q15678 1187 aa12.14□□□□□ -0.47
CDC42SE1-207ENST00000540998 STX1AQ16623 288 aa12.14□□□□□ -0.47
CDC42SE1-207ENST00000540998 UTP14CQ5TAP6 766 aaKnown RBP12.14□□□□□ -0.47
CDC42SE1-207ENST00000540998 FBXO38Q6PIJ6 1188 aa12.14□□□□□ -0.47
CDC42SE1-207ENST00000540998 SDF4Q9BRK5 362 aa12.14□□□□□ -0.47
CDC42SE1-207ENST00000540998 NLRP2Q9NX02 1062 aa12.14□□□□□ -0.47
CDC42SE1-207ENST00000540998 HMG20BQ9P0W2 317 aa12.14□□□□□ -0.47
CDC42SE1-207ENST00000540998 PCDHA7Q9UN72 937 aa12.14□□□□□ -0.47
CDC42SE1-207ENST00000540998 NFAT5O94916 1531 aa12.13□□□□□ -0.47
CDC42SE1-207ENST00000540998 RXRAP19793 462 aa12.13□□□□□ -0.47
CDC42SE1-207ENST00000540998 LRRC24Q50LG9 513 aa12.13□□□□□ -0.47
CDC42SE1-207ENST00000540998 ANKRD13DQ6ZTN6 518 aa12.13□□□□□ -0.47
CDC42SE1-207ENST00000540998 AIFM3Q96NN9 605 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms