RNA–Protein interactions for RNA: ENST00000540797.5

USP3-204, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2 BASIC

Gene USP3, Length 5,474 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-204ENST00000540797 UBA7P41226 1012 aa16.3■□□□□ 0.2
USP3-204ENST00000540797 FGFR1OPO95684 399 aaKnown RBP16.29■□□□□ 0.2
USP3-204ENST00000540797 PDE8AO60658 829 aa16.29■□□□□ 0.2
USP3-204ENST00000540797 NBPF7P0C2Y1 421 aaPredicted RBP16.29■□□□□ 0.2
USP3-204ENST00000540797 AMPD3Q01432 767 aa16.29■□□□□ 0.2
USP3-204ENST00000540797 CCDC183Q5T5S1 534 aa16.29■□□□□ 0.2
USP3-204ENST00000540797 FAM177A1Q8N128 213 aaPredicted RBP16.29■□□□□ 0.2
USP3-204ENST00000540797 ARHGEF5Q12774 1597 aa16.29■□□□□ 0.2
USP3-204ENST00000540797 LMOD1P29536 600 aaPredicted RBP16.29■□□□□ 0.2
USP3-204ENST00000540797 TCEANC2Q96MN5 208 aa16.29■□□□□ 0.2
USP3-204ENST00000540797 RLBP1P12271 317 aa16.29■□□□□ 0.2
USP3-204ENST00000540797 IDEP14735 1019 aa16.29■□□□□ 0.2
USP3-204ENST00000540797 DENND2AQ9ULE3 1009 aa16.29■□□□□ 0.2
USP3-204ENST00000540797 CHL1O00533 1208 aa16.28■□□□□ 0.2
USP3-204ENST00000540797 EPB41L2O43491 1005 aaKnown RBP16.28■□□□□ 0.2
USP3-204ENST00000540797 CCDC148Q8NFR7 591 aa16.28■□□□□ 0.2
USP3-204ENST00000540797 CFAP65Q6ZU64 1925 aaKnown RBP16.28■□□□□ 0.2
USP3-204ENST00000540797 EYA2O00167 538 aa16.28■□□□□ 0.2
USP3-204ENST00000540797 CTAGE5O15320 804 aa16.28■□□□□ 0.2
USP3-204ENST00000540797 NECAB1Q8N987 351 aa16.28■□□□□ 0.2
USP3-204ENST00000540797 ABCA8O94911 1581 aa16.28■□□□□ 0.2
USP3-204ENST00000540797 ERLIN2O94905 339 aa16.28■□□□□ 0.2
USP3-204ENST00000540797 HEATR3Q7Z4Q2 680 aa16.28■□□□□ 0.2
USP3-204ENST00000540797 ZBTB40Q9NUA8 1239 aa16.27■□□□□ 0.2
USP3-204ENST00000540797 MAGI3Q5TCQ9 1506 aa16.27■□□□□ 0.19
USP3-204ENST00000540797 IL27Q8NEV9 243 aa16.27■□□□□ 0.19
USP3-204ENST00000540797 PANK2Q9BZ23 570 aa16.27■□□□□ 0.19
USP3-204ENST00000540797 ERVV-2B6SEH9 535 aa16.27■□□□□ 0.19
USP3-204ENST00000540797 SSR1P43307 286 aaKnown RBP16.27■□□□□ 0.19
USP3-204ENST00000540797 BAG6P46379 1132 aa16.27■□□□□ 0.19
USP3-204ENST00000540797 KIAA1328Q86T90 577 aa16.27■□□□□ 0.19
USP3-204ENST00000540797 ALG1Q9BT22 464 aa16.27■□□□□ 0.19
USP3-204ENST00000540797 PTPRTO14522 1441 aa16.26■□□□□ 0.19
USP3-204ENST00000540797 NPHP4O75161 1426 aaPredicted RBP16.26■□□□□ 0.19
USP3-204ENST00000540797 PRC1O43663 620 aa16.26■□□□□ 0.19
USP3-204ENST00000540797 RBM25P49756 843 aaKnown RBP16.26■□□□□ 0.19
USP3-204ENST00000540797 Q6ZUG5 572 aa16.26■□□□□ 0.19
USP3-204ENST00000540797 ZNF496Q96IT1 587 aaPredicted RBP16.26■□□□□ 0.19
USP3-204ENST00000540797 GJA3Q9Y6H8 435 aa16.26■□□□□ 0.19
USP3-204ENST00000540797 PLEKHG1Q9ULL1 1385 aa16.26■□□□□ 0.19
USP3-204ENST00000540797 SKIDA1Q1XH10 827 aa16.26■□□□□ 0.19
USP3-204ENST00000540797 PYM1Q9BRP8 204 aaKnown RBP16.26■□□□□ 0.19
USP3-204ENST00000540797 GGA1Q9UJY5 639 aa16.26■□□□□ 0.19
USP3-204ENST00000540797 EFCAB6Q5THR3 1501 aa16.26■□□□□ 0.19
USP3-204ENST00000540797 H0YIN7 160 aa16.26■□□□□ 0.19
USP3-204ENST00000540797 HIBADHP31937 336 aaKnown RBP16.26■□□□□ 0.19
USP3-204ENST00000540797 TNNI2P48788 182 aa16.26■□□□□ 0.19
USP3-204ENST00000540797 CACNA2D4Q7Z3S7 1137 aa16.26■□□□□ 0.19
USP3-204ENST00000540797 TBC1D32Q96NH3 1257 aa16.25■□□□□ 0.19
USP3-204ENST00000540797 PUM3Q15397 648 aaKnown RBP16.25■□□□□ 0.19
USP3-204ENST00000540797 ANAPC15P60006 121 aa16.25■□□□□ 0.19
USP3-204ENST00000540797 TMX3Q96JJ7 454 aa16.25■□□□□ 0.19
USP3-204ENST00000540797 DDX19AQ9NUU7 478 aaKnown RBP16.25■□□□□ 0.19
USP3-204ENST00000540797 STXBP4Q6ZWJ1 553 aa16.25■□□□□ 0.19
USP3-204ENST00000540797 CCDC150Q8NCX0 1101 aa16.25■□□□□ 0.19
USP3-204ENST00000540797 GDPD2Q9HCC8 539 aa16.25■□□□□ 0.19
USP3-204ENST00000540797 A0A1B0GUL7 405 aa16.25■□□□□ 0.19
USP3-204ENST00000540797 CKAP2LQ8IYA6 745 aa16.25■□□□□ 0.19
USP3-204ENST00000540797 ZSCAN16Q9H4T2 348 aaPredicted RBP16.25■□□□□ 0.19
USP3-204ENST00000540797 NEBLO76041 1014 aa16.24■□□□□ 0.19
USP3-204ENST00000540797 NAPAP54920 295 aa16.24■□□□□ 0.19
USP3-204ENST00000540797 ERMNQ8TAM6 284 aa16.24■□□□□ 0.19
USP3-204ENST00000540797 TNPO1Q92973 898 aaKnown RBP16.24■□□□□ 0.19
USP3-204ENST00000540797 MAGI2Q86UL8 1455 aa16.24■□□□□ 0.19
USP3-204ENST00000540797 MBD5Q9P267 1494 aa16.24■□□□□ 0.19
USP3-204ENST00000540797 SBNO2Q9Y2G9 1366 aa16.24■□□□□ 0.19
USP3-204ENST00000540797 CALM1P0DP23 149 aa16.24■□□□□ 0.19
USP3-204ENST00000540797 CALM2P0DP24 149 aa16.24■□□□□ 0.19
USP3-204ENST00000540797 CALM3P0DP25 149 aa16.24■□□□□ 0.19
USP3-204ENST00000540797 TIMM10P62072 90 aa16.24■□□□□ 0.19
USP3-204ENST00000540797 SMARCC2Q8TAQ2 1214 aa16.24■□□□□ 0.19
USP3-204ENST00000540797 PATL2C9JE40 543 aaKnown RBP16.24■□□□□ 0.19
USP3-204ENST00000540797 SETQ01105 290 aaPredicted RBP16.24■□□□□ 0.19
USP3-204ENST00000540797 TTC6Q86TZ1 520 aa16.24■□□□□ 0.19
USP3-204ENST00000540797 TRIM35Q9UPQ4 493 aa16.24■□□□□ 0.19
USP3-204ENST00000540797 ARHGAP29Q52LW3 1261 aa16.23■□□□□ 0.19
USP3-204ENST00000540797 TAF4BQ92750 862 aa16.23■□□□□ 0.19
USP3-204ENST00000540797 USP19O94966 1318 aa16.23■□□□□ 0.19
USP3-204ENST00000540797 PLS1Q14651 629 aa16.23■□□□□ 0.19
USP3-204ENST00000540797 LRRC27Q9C0I9 530 aa16.23■□□□□ 0.19
USP3-204ENST00000540797 METP08581 1390 aa16.23■□□□□ 0.19
USP3-204ENST00000540797 RTL9Q8NET4 1388 aa16.23■□□□□ 0.19
USP3-204ENST00000540797 ZNF771Q7L3S4 317 aaPredicted RBP16.23■□□□□ 0.19
USP3-204ENST00000540797 CCDC24Q8N4L8 307 aa16.23■□□□□ 0.19
USP3-204ENST00000540797 DPP8Q6V1X1 898 aaPredicted RBP16.23■□□□□ 0.19
USP3-204ENST00000540797 TEX11Q8IYF3 940 aa16.23■□□□□ 0.19
USP3-204ENST00000540797 MBD4O95243 580 aa16.22■□□□□ 0.19
USP3-204ENST00000540797 SPA17Q15506 151 aa16.22■□□□□ 0.19
USP3-204ENST00000540797 SYCP3Q8IZU3 236 aa16.22■□□□□ 0.19
USP3-204ENST00000540797 PLXNC1O60486 1568 aa16.22■□□□□ 0.19
USP3-204ENST00000540797 EIF4A1P60842 406 aaKnown RBP16.22■□□□□ 0.19
USP3-204ENST00000540797 KANK3Q6NY19 840 aa16.22■□□□□ 0.19
USP3-204ENST00000540797 VPS36Q86VN1 386 aa16.22■□□□□ 0.19
USP3-204ENST00000540797 KDM5DQ9BY66 1539 aa16.22■□□□□ 0.19
USP3-204ENST00000540797 UGGT1Q9NYU2 1555 aa16.22■□□□□ 0.19
USP3-204ENST00000540797 BMP15O95972 392 aa16.22■□□□□ 0.19
USP3-204ENST00000540797 ZNF594Q96JF6 807 aaPredicted RBP16.22■□□□□ 0.19
USP3-204ENST00000540797 ADGBQ8N7X0 1667 aa16.22■□□□□ 0.19
USP3-204ENST00000540797 BIN1O00499 593 aa16.22■□□□□ 0.19
USP3-204ENST00000540797 CETN1Q12798 172 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms