RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 A0A1B0GUL6 1792 aa19.81■□□□□ 0.76
TRAF3-204ENST00000539721 CRY2Q49AN0 593 aa19.81■□□□□ 0.76
TRAF3-204ENST00000539721 BMP2KLQ5H9B9 411 aa19.81■□□□□ 0.76
TRAF3-204ENST00000539721 TLR7Q9NYK1 1049 aaKnown RBP19.81■□□□□ 0.76
TRAF3-204ENST00000539721 RPS8P62241 208 aaKnown RBP19.8■□□□□ 0.76
TRAF3-204ENST00000539721 NEUROD6Q96NK8 337 aa19.8■□□□□ 0.76
TRAF3-204ENST00000539721 TTC41PQ6P2S7 1318 aa19.8■□□□□ 0.76
TRAF3-204ENST00000539721 KLRG2A4D1S0 409 aaPredicted RBP19.8■□□□□ 0.76
TRAF3-204ENST00000539721 GSPT1P15170 499 aaKnown RBP19.8■□□□□ 0.76
TRAF3-204ENST00000539721 R3HDM1Q15032 1099 aaKnown RBP19.8■□□□□ 0.76
TRAF3-204ENST00000539721 RBM17Q96I25 401 aaKnown RBP19.8■□□□□ 0.76
TRAF3-204ENST00000539721 BSDC1Q9NW68 430 aaPredicted RBP19.8■□□□□ 0.76
TRAF3-204ENST00000539721 A0A1B0GUL7 405 aa19.79■□□□□ 0.76
TRAF3-204ENST00000539721 PDE6BP35913 854 aa19.79■□□□□ 0.76
TRAF3-204ENST00000539721 GRAPQ13588 217 aa19.79■□□□□ 0.76
TRAF3-204ENST00000539721 VGLL2Q8N8G2 317 aa19.79■□□□□ 0.76
TRAF3-204ENST00000539721 GRAPLQ8TC17 118 aaPredicted RBP19.79■□□□□ 0.76
TRAF3-204ENST00000539721 ECHDC1Q9NTX5 307 aa19.79■□□□□ 0.76
TRAF3-204ENST00000539721 DBNLQ9UJU6 430 aaKnown RBP19.79■□□□□ 0.76
TRAF3-204ENST00000539721 PDE8BO95263 885 aa19.78■□□□□ 0.76
TRAF3-204ENST00000539721 COL11A2P13942 1736 aaPredicted RBP19.78■□□□□ 0.76
TRAF3-204ENST00000539721 TIMM10P62072 90 aa19.78■□□□□ 0.76
TRAF3-204ENST00000539721 ATP2B3Q16720 1220 aa19.78■□□□□ 0.76
TRAF3-204ENST00000539721 HELBQ8NG08 1087 aaPredicted RBP19.78■□□□□ 0.76
TRAF3-204ENST00000539721 DBNDD2Q9BQY9 259 aa19.78■□□□□ 0.76
TRAF3-204ENST00000539721 ERC2O15083 957 aa19.78■□□□□ 0.76
TRAF3-204ENST00000539721 CHRNDQ07001 517 aa19.78■□□□□ 0.76
TRAF3-204ENST00000539721 ILDR2Q71H61 639 aa19.78■□□□□ 0.76
TRAF3-204ENST00000539721 PI4K2BQ8TCG2 481 aa19.78■□□□□ 0.76
TRAF3-204ENST00000539721 ARAP2Q8WZ64 1704 aa19.77■□□□□ 0.75
TRAF3-204ENST00000539721 GLRX3O76003 335 aaKnown RBP19.76■□□□□ 0.75
TRAF3-204ENST00000539721 ZBTB7AO95365 584 aa19.76■□□□□ 0.75
TRAF3-204ENST00000539721 HOXA10P31260 410 aaPredicted RBP19.76■□□□□ 0.75
TRAF3-204ENST00000539721 PUM3Q15397 648 aaKnown RBP19.76■□□□□ 0.75
TRAF3-204ENST00000539721 AK9Q5TCS8 1911 aa19.76■□□□□ 0.75
TRAF3-204ENST00000539721 TAF5LO75529 589 aa19.75■□□□□ 0.75
TRAF3-204ENST00000539721 C8orf34Q49A92 452 aa19.75■□□□□ 0.75
TRAF3-204ENST00000539721 CRAMP1Q96RY5 1269 aa19.75■□□□□ 0.75
TRAF3-204ENST00000539721 MINPP1Q9UNW1 487 aa19.75■□□□□ 0.75
TRAF3-204ENST00000539721 MTFR1LQ9H019 292 aa19.75■□□□□ 0.75
TRAF3-204ENST00000539721 SRGNP10124 158 aa19.74■□□□□ 0.75
TRAF3-204ENST00000539721 NPR1P16066 1061 aa19.74■□□□□ 0.75
TRAF3-204ENST00000539721 SDSP20132 328 aa19.74■□□□□ 0.75
TRAF3-204ENST00000539721 GORABQ5T7V8 394 aa19.74■□□□□ 0.75
TRAF3-204ENST00000539721 LPIN2Q92539 896 aa19.74■□□□□ 0.75
TRAF3-204ENST00000539721 XAGE2Q96GT9 111 aa19.74■□□□□ 0.75
TRAF3-204ENST00000539721 PSDA5PKW4 1024 aaPredicted RBP19.73■□□□□ 0.75
TRAF3-204ENST00000539721 TRIM6-TRIM34B2RNG4 842 aa19.73■□□□□ 0.75
TRAF3-204ENST00000539721 SLC5A1P13866 664 aa19.73■□□□□ 0.75
TRAF3-204ENST00000539721 FGFR2P21802 821 aa19.73■□□□□ 0.75
TRAF3-204ENST00000539721 ADORA1P30542 326 aa19.73■□□□□ 0.75
TRAF3-204ENST00000539721 BACH2Q9BYV9 841 aa19.73■□□□□ 0.75
TRAF3-204ENST00000539721 CACNA1SQ13698 1873 aa19.73■□□□□ 0.75
TRAF3-204ENST00000539721 C2CD5Q86YS7 1000 aa19.72■□□□□ 0.75
TRAF3-204ENST00000539721 MASTLQ96GX5 879 aa19.72■□□□□ 0.75
TRAF3-204ENST00000539721 ANKRD2Q9GZV1 360 aa19.72■□□□□ 0.75
TRAF3-204ENST00000539721 ATF5Q9Y2D1 282 aaPredicted RBP19.72■□□□□ 0.75
TRAF3-204ENST00000539721 C10orf71Q711Q0 1435 aa19.72■□□□□ 0.75
TRAF3-204ENST00000539721 BBOX1O75936 387 aa19.72■□□□□ 0.75
TRAF3-204ENST00000539721 ATP5JP18859 108 aa19.72■□□□□ 0.75
TRAF3-204ENST00000539721 POLD1P28340 1107 aa19.72■□□□□ 0.75
TRAF3-204ENST00000539721 RILPL2Q969X0 211 aa19.72■□□□□ 0.75
TRAF3-204ENST00000539721 H0YIN7 160 aa19.71■□□□□ 0.75
TRAF3-204ENST00000539721 MAP4K4O95819 1239 aaPredicted RBP19.71■□□□□ 0.75
TRAF3-204ENST00000539721 IFIT1P09914 478 aaKnown RBP19.71■□□□□ 0.75
TRAF3-204ENST00000539721 CCDC158Q5M9N0 1113 aa19.71■□□□□ 0.75
TRAF3-204ENST00000539721 BOLA2Q9H3K6 86 aa19.71■□□□□ 0.75
TRAF3-204ENST00000539721 SNAP23O00161 211 aa19.7■□□□□ 0.74
TRAF3-204ENST00000539721 ALDH1B1P30837 517 aa19.7■□□□□ 0.74
TRAF3-204ENST00000539721 TTC39AQ5SRH9 613 aa19.7■□□□□ 0.74
TRAF3-204ENST00000539721 LRRC37AA6NMS7 1700 aa19.7■□□□□ 0.74
TRAF3-204ENST00000539721 PPEF1O14829 653 aaPredicted RBP19.7■□□□□ 0.74
TRAF3-204ENST00000539721 CDC45O75419 566 aa19.7■□□□□ 0.74
TRAF3-204ENST00000539721 UBE4AQ14139 1066 aa19.7■□□□□ 0.74
TRAF3-204ENST00000539721 TMC4Q7Z404 712 aa19.7■□□□□ 0.74
TRAF3-204ENST00000539721 CNTROBQ8N137 903 aa19.7■□□□□ 0.74
TRAF3-204ENST00000539721 ZNF622Q969S3 477 aaKnown RBP eCLIP19.7■□□□□ 0.74
TRAF3-204ENST00000539721 KIF13BQ9NQT8 1826 aa19.69■□□□□ 0.74
TRAF3-204ENST00000539721 KCNJ4P48050 445 aa19.69■□□□□ 0.74
TRAF3-204ENST00000539721 STYK1Q6J9G0 422 aa19.68■□□□□ 0.74
TRAF3-204ENST00000539721 ANKIB1Q9P2G1 1089 aa19.68■□□□□ 0.74
TRAF3-204ENST00000539721 DLEC1Q9Y238 1755 aa19.68■□□□□ 0.74
TRAF3-204ENST00000539721 CHRNA5P30532 468 aa19.67■□□□□ 0.74
TRAF3-204ENST00000539721 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.67■□□□□ 0.74
TRAF3-204ENST00000539721 XDHP47989 1333 aa19.67■□□□□ 0.74
TRAF3-204ENST00000539721 SLC51AQ86UW1 340 aa19.67■□□□□ 0.74
TRAF3-204ENST00000539721 DNAJC2Q99543 621 aaKnown RBP19.67■□□□□ 0.74
TRAF3-204ENST00000539721 HAUS7Q99871 368 aa19.67■□□□□ 0.74
TRAF3-204ENST00000539721 CCDC102BQ68D86 513 aa19.66■□□□□ 0.74
TRAF3-204ENST00000539721 TBC1D9Q6ZT07 1266 aa19.66■□□□□ 0.74
TRAF3-204ENST00000539721 EVI5LQ96CN4 794 aa19.66■□□□□ 0.74
TRAF3-204ENST00000539721 TSHZ2Q9NRE2 1034 aa19.66■□□□□ 0.74
TRAF3-204ENST00000539721 CASC1Q6TDU7 716 aa19.65■□□□□ 0.74
TRAF3-204ENST00000539721 SP8Q8IXZ3 490 aa19.65■□□□□ 0.74
TRAF3-204ENST00000539721 ZNF804BA4D1E1 1349 aa19.65■□□□□ 0.74
TRAF3-204ENST00000539721 WTIPA6NIX2 430 aaPredicted RBP19.65■□□□□ 0.74
TRAF3-204ENST00000539721 PHKA1P46020 1223 aa19.65■□□□□ 0.74
TRAF3-204ENST00000539721 GPSM2P81274 684 aa19.65■□□□□ 0.74
TRAF3-204ENST00000539721 CNKSR1Q969H4 720 aa19.65■□□□□ 0.74
TRAF3-204ENST00000539721 LEMD3Q9Y2U8 911 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms