RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 MDFIQ99750 246 aa1.67□□□□□ -2.14
HIF1A-204ENST00000539097 NIFKQ9BYG3 293 aaKnown RBP1.67□□□□□ -2.14
HIF1A-204ENST00000539097 PHACTR1Q9C0D0 580 aa1.67□□□□□ -2.14
HIF1A-204ENST00000539097 CCDC113Q9H0I3 377 aa1.67□□□□□ -2.14
HIF1A-204ENST00000539097 SUV39H2Q9H5I1 410 aa1.67□□□□□ -2.14
HIF1A-204ENST00000539097 KRT82Q9NSB4 513 aa1.67□□□□□ -2.14
HIF1A-204ENST00000539097 USP35Q9P2H5 1018 aa1.67□□□□□ -2.14
HIF1A-204ENST00000539097 PHF24Q9UPV7 400 aa1.67□□□□□ -2.14
HIF1A-204ENST00000539097 SERTM1A2A2V5 107 aa1.67□□□□□ -2.14
HIF1A-204ENST00000539097 NOS2P35228 1153 aa1.67□□□□□ -2.14
HIF1A-204ENST00000539097 CCNFP41002 786 aa1.67□□□□□ -2.14
HIF1A-204ENST00000539097 ZAP70P43403 619 aa1.67□□□□□ -2.14
HIF1A-204ENST00000539097 EAPPQ56P03 285 aaPredicted RBP1.67□□□□□ -2.14
HIF1A-204ENST00000539097 COL13A1Q5TAT6 717 aaPredicted RBP1.67□□□□□ -2.14
HIF1A-204ENST00000539097 PRICKLE2Q7Z3G6 844 aa1.67□□□□□ -2.14
HIF1A-204ENST00000539097 MEIOBQ8N635 442 aa1.67□□□□□ -2.14
HIF1A-204ENST00000539097 KANSL2Q9H9L4 492 aa1.67□□□□□ -2.14
HIF1A-204ENST00000539097 OSGEPQ9NPF4 335 aa1.67□□□□□ -2.14
HIF1A-204ENST00000539097 NDFIP2Q9NV92 336 aa1.67□□□□□ -2.14
HIF1A-204ENST00000539097 CNTN3Q9P232 1028 aa1.67□□□□□ -2.14
HIF1A-204ENST00000539097 SPG7Q9UQ90 795 aa1.67□□□□□ -2.14
HIF1A-204ENST00000539097 PRKAB1Q9Y478 270 aa1.67□□□□□ -2.14
HIF1A-204ENST00000539097 PNMA6FA0A0J9YX94 578 aa1.66□□□□□ -2.14
HIF1A-204ENST00000539097 MEGF11A6BM72 1044 aa1.66□□□□□ -2.14
HIF1A-204ENST00000539097 ST8SIA5O15466 376 aa1.66□□□□□ -2.14
HIF1A-204ENST00000539097 RFPL3O75679 317 aa1.66□□□□□ -2.14
HIF1A-204ENST00000539097 NPTXRO95502 500 aa1.66□□□□□ -2.14
HIF1A-204ENST00000539097 PDGFAP04085 211 aa1.66□□□□□ -2.14
HIF1A-204ENST00000539097 RHOQP17081 205 aa1.66□□□□□ -2.14
HIF1A-204ENST00000539097 NCLP19338 710 aaKnown RBP1.66□□□□□ -2.14
HIF1A-204ENST00000539097 MAP2K3P46734 347 aa1.66□□□□□ -2.14
HIF1A-204ENST00000539097 ARSDP51689 593 aa1.66□□□□□ -2.14
HIF1A-204ENST00000539097 ZNF697Q5TEC3 545 aa1.66□□□□□ -2.14
HIF1A-204ENST00000539097 REXO1Q8N1G1 1221 aaKnown RBP1.66□□□□□ -2.14
HIF1A-204ENST00000539097 DNAJC2Q99543 621 aaKnown RBP1.66□□□□□ -2.14
HIF1A-204ENST00000539097 BHLHE41Q9C0J9 482 aaPredicted RBP1.66□□□□□ -2.14
HIF1A-204ENST00000539097 ZFYVE28Q9HCC9 887 aa1.66□□□□□ -2.14
HIF1A-204ENST00000539097 SIRPGQ9P1W8 387 aa1.66□□□□□ -2.14
HIF1A-204ENST00000539097 FAM8A1Q9UBU6 413 aa1.66□□□□□ -2.14
HIF1A-204ENST00000539097 DNMT3LQ9UJW3 386 aa1.66□□□□□ -2.14
HIF1A-204ENST00000539097 ENPP3O14638 875 aa1.66□□□□□ -2.14
HIF1A-204ENST00000539097 SLC19A1P41440 591 aa1.66□□□□□ -2.14
HIF1A-204ENST00000539097 WDR4P57081 412 aaKnown RBP1.66□□□□□ -2.14
HIF1A-204ENST00000539097 GNL2Q13823 731 aaKnown RBP1.66□□□□□ -2.14
HIF1A-204ENST00000539097 CPSF6Q16630 551 aaKnown RBP eCLIP1.66□□□□□ -2.14
HIF1A-204ENST00000539097 RGL3Q3MIN7 710 aa1.66□□□□□ -2.14
HIF1A-204ENST00000539097 MPRIPQ6WCQ1 1025 aa1.66□□□□□ -2.14
HIF1A-204ENST00000539097 C22orf34Q6ZV56 151 aa1.66□□□□□ -2.14
HIF1A-204ENST00000539097 TRIM46Q7Z4K8 759 aa1.66□□□□□ -2.14
HIF1A-204ENST00000539097 TREML1Q86YW5 311 aa1.66□□□□□ -2.14
HIF1A-204ENST00000539097 NLGN1Q8N2Q7 840 aa1.66□□□□□ -2.14
HIF1A-204ENST00000539097 TMEM102Q8N9M5 508 aaPredicted RBP1.66□□□□□ -2.14
HIF1A-204ENST00000539097 GLIS3Q8NEA6 775 aa1.66□□□□□ -2.14
HIF1A-204ENST00000539097 RNF217Q8TC41 542 aa1.66□□□□□ -2.14
HIF1A-204ENST00000539097 SREK1Q8WXA9 508 aaKnown RBP1.66□□□□□ -2.14
HIF1A-204ENST00000539097 EDEM1Q92611 657 aa1.66□□□□□ -2.14
HIF1A-204ENST00000539097 PLD4Q96BZ4 506 aa1.66□□□□□ -2.14
HIF1A-204ENST00000539097 CNTNAP3BQ96NU0 1288 aa1.66□□□□□ -2.14
HIF1A-204ENST00000539097 CAMKK2Q96RR4 588 aa1.66□□□□□ -2.14
HIF1A-204ENST00000539097 HIRIP3Q9BW71 556 aaPredicted RBP1.66□□□□□ -2.14
HIF1A-204ENST00000539097 NT5C1AQ9BXI3 368 aa1.66□□□□□ -2.14
HIF1A-204ENST00000539097 CNTNAP3Q9BZ76 1288 aa1.66□□□□□ -2.14
HIF1A-204ENST00000539097 PDGFDQ9GZP0 370 aaPredicted RBP1.66□□□□□ -2.14
HIF1A-204ENST00000539097 PIF1Q9H611 641 aa1.66□□□□□ -2.14
HIF1A-204ENST00000539097 NPHS2Q9NP85 383 aa1.66□□□□□ -2.14
HIF1A-204ENST00000539097 ZFATQ9P243 1243 aa1.66□□□□□ -2.14
HIF1A-204ENST00000539097 ADAM30Q9UKF2 790 aa1.66□□□□□ -2.14
HIF1A-204ENST00000539097 SLC12A7Q9Y666 1083 aa1.66□□□□□ -2.14
HIF1A-204ENST00000539097 MEN1O00255 615 aa1.66□□□□□ -2.14
HIF1A-204ENST00000539097 SMARCA5O60264 1052 aaPredicted RBP1.66□□□□□ -2.14
HIF1A-204ENST00000539097 ATE1O95260 518 aa1.66□□□□□ -2.14
HIF1A-204ENST00000539097 TATP17735 454 aaPredicted RBP1.66□□□□□ -2.14
HIF1A-204ENST00000539097 CRKP46108 304 aa1.66□□□□□ -2.14
HIF1A-204ENST00000539097 PLA2G4AP47712 749 aa1.66□□□□□ -2.14
HIF1A-204ENST00000539097 LRRC14Q15048 493 aa1.66□□□□□ -2.14
HIF1A-204ENST00000539097 NBPF1Q3BBV0 1214 aa1.66□□□□□ -2.14
HIF1A-204ENST00000539097 ERMP1Q7Z2K6 904 aa1.66□□□□□ -2.14
HIF1A-204ENST00000539097 SNX29Q8TEQ0 813 aa1.66□□□□□ -2.14
HIF1A-204ENST00000539097 PUS7Q96PZ0 661 aaKnown RBP1.66□□□□□ -2.14
HIF1A-204ENST00000539097 ORAI3Q9BRQ5 295 aa1.66□□□□□ -2.14
HIF1A-204ENST00000539097 KANSL3Q9P2N6 904 aa1.66□□□□□ -2.14
HIF1A-204ENST00000539097 BRPF3Q9ULD4 1205 aa1.66□□□□□ -2.14
HIF1A-204ENST00000539097 NSFL1CQ9UNZ2 370 aaKnown RBP1.66□□□□□ -2.14
HIF1A-204ENST00000539097 EIF1AYO14602 144 aaKnown RBP1.66□□□□□ -2.14
HIF1A-204ENST00000539097 EREGO14944 169 aa1.66□□□□□ -2.14
HIF1A-204ENST00000539097 AOC2O75106 756 aa1.66□□□□□ -2.14
HIF1A-204ENST00000539097 LDHBP07195 334 aaKnown RBP1.66□□□□□ -2.14
HIF1A-204ENST00000539097 GNA15P30679 374 aa1.66□□□□□ -2.14
HIF1A-204ENST00000539097 NRLP54845 237 aa1.66□□□□□ -2.14
HIF1A-204ENST00000539097 PLAURQ03405 335 aa1.66□□□□□ -2.14
HIF1A-204ENST00000539097 POU4F2Q12837 409 aa1.66□□□□□ -2.14
HIF1A-204ENST00000539097 LARP7Q4G0J3 582 aaKnown RBP eCLIP1.66□□□□□ -2.14
HIF1A-204ENST00000539097 LSRQ86X29 649 aaPredicted RBP1.66□□□□□ -2.14
HIF1A-204ENST00000539097 VPS37DQ86XT2 251 aa1.66□□□□□ -2.14
HIF1A-204ENST00000539097 C3orf58Q8NDZ4 430 aa1.66□□□□□ -2.14
HIF1A-204ENST00000539097 GPAMQ9HCL2 828 aa1.66□□□□□ -2.14
HIF1A-204ENST00000539097 SOS2Q07890 1332 aaPredicted RBP1.65□□□□□ -2.14
HIF1A-204ENST00000539097 PRR36Q9H6K5 1346 aa1.65□□□□□ -2.14
HIF1A-204ENST00000539097 DNAJC25-GNG10A0A024R161 153 aa1.65□□□□□ -2.14
HIF1A-204ENST00000539097 EFSO43281 561 aa1.65□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms