RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 PDE1AP54750 535 aa18.87■□□□□ 0.61
VAMP1-207ENST00000539047 BMP2KLQ5H9B9 411 aa18.87■□□□□ 0.61
VAMP1-207ENST00000539047 TTC22Q5TAA0 569 aa18.87■□□□□ 0.61
VAMP1-207ENST00000539047 C3orf67Q6ZVT6 689 aa18.87■□□□□ 0.61
VAMP1-207ENST00000539047 C16orf71Q8IYS4 520 aaPredicted RBP18.87■□□□□ 0.61
VAMP1-207ENST00000539047 OSBPL3Q9H4L5 887 aa18.87■□□□□ 0.61
VAMP1-207ENST00000539047 CACNA1SQ13698 1873 aa18.86■□□□□ 0.61
VAMP1-207ENST00000539047 COL11A2P13942 1736 aaPredicted RBP18.86■□□□□ 0.61
VAMP1-207ENST00000539047 ECHDC1Q9NTX5 307 aa18.86■□□□□ 0.61
VAMP1-207ENST00000539047 STAP2Q9UGK3 403 aa18.86■□□□□ 0.61
VAMP1-207ENST00000539047 RIPOR2Q9Y4F9 1068 aa18.86■□□□□ 0.61
VAMP1-207ENST00000539047 GLRX3O76003 335 aaKnown RBP18.85■□□□□ 0.61
VAMP1-207ENST00000539047 POLD1P28340 1107 aa18.85■□□□□ 0.61
VAMP1-207ENST00000539047 RPS8P62241 208 aaKnown RBP18.85■□□□□ 0.61
VAMP1-207ENST00000539047 GRAPQ13588 217 aa18.85■□□□□ 0.61
VAMP1-207ENST00000539047 PUM3Q15397 648 aaKnown RBP18.85■□□□□ 0.61
VAMP1-207ENST00000539047 ATP2B3Q16720 1220 aa18.85■□□□□ 0.61
VAMP1-207ENST00000539047 CRY2Q49AN0 593 aa18.85■□□□□ 0.61
VAMP1-207ENST00000539047 GORABQ5T7V8 394 aa18.85■□□□□ 0.61
VAMP1-207ENST00000539047 GRAPLQ8TC17 118 aaPredicted RBP18.85■□□□□ 0.61
VAMP1-207ENST00000539047 OTUD7AQ8TE49 926 aaPredicted RBP18.85■□□□□ 0.61
VAMP1-207ENST00000539047 NEUROD6Q96NK8 337 aa18.85■□□□□ 0.61
VAMP1-207ENST00000539047 BSDC1Q9NW68 430 aaPredicted RBP18.85■□□□□ 0.61
VAMP1-207ENST00000539047 PPP1R1BQ9UD71 204 aaPredicted RBP18.85■□□□□ 0.61
VAMP1-207ENST00000539047 SALL3Q9BXA9 1300 aa18.84■□□□□ 0.61
VAMP1-207ENST00000539047 TMC4Q7Z404 712 aa18.84■□□□□ 0.61
VAMP1-207ENST00000539047 EAF2Q96CJ1 260 aaPredicted RBP18.84■□□□□ 0.61
VAMP1-207ENST00000539047 ANKRD2Q9GZV1 360 aa18.84■□□□□ 0.61
VAMP1-207ENST00000539047 CCDC8Q9H0W5 538 aaPredicted RBP18.84■□□□□ 0.61
VAMP1-207ENST00000539047 DLEC1Q9Y238 1755 aa18.83■□□□□ 0.61
VAMP1-207ENST00000539047 A0A1B0GUL7 405 aa18.83■□□□□ 0.6
VAMP1-207ENST00000539047 EIF5BO60841 1220 aaKnown RBP18.83■□□□□ 0.6
VAMP1-207ENST00000539047 PDE8BO95263 885 aa18.83■□□□□ 0.6
VAMP1-207ENST00000539047 ZBTB7AO95365 584 aa18.83■□□□□ 0.6
VAMP1-207ENST00000539047 SLC5A1P13866 664 aa18.83■□□□□ 0.6
VAMP1-207ENST00000539047 NPR1P16066 1061 aa18.83■□□□□ 0.6
VAMP1-207ENST00000539047 CASC1Q6TDU7 716 aa18.83■□□□□ 0.6
VAMP1-207ENST00000539047 MTFR1LQ9H019 292 aa18.83■□□□□ 0.6
VAMP1-207ENST00000539047 TMX4Q9H1E5 349 aaPredicted RBP18.83■□□□□ 0.6
VAMP1-207ENST00000539047 IFIT1P09914 478 aaKnown RBP18.82■□□□□ 0.6
VAMP1-207ENST00000539047 KCNJ4P48050 445 aa18.82■□□□□ 0.6
VAMP1-207ENST00000539047 CCDC158Q5M9N0 1113 aa18.82■□□□□ 0.6
VAMP1-207ENST00000539047 CELF1Q92879 486 aaKnown RBP18.82■□□□□ 0.6
VAMP1-207ENST00000539047 CRAMP1Q96RY5 1269 aa18.82■□□□□ 0.6
VAMP1-207ENST00000539047 LRRC37AA6NMS7 1700 aa18.82■□□□□ 0.6
VAMP1-207ENST00000539047 KIF13BQ9NQT8 1826 aa18.81■□□□□ 0.6
VAMP1-207ENST00000539047 KLRG2A4D1S0 409 aaPredicted RBP18.81■□□□□ 0.6
VAMP1-207ENST00000539047 TRIM6-TRIM34B2RNG4 842 aa18.81■□□□□ 0.6
VAMP1-207ENST00000539047 ALDH1B1P30837 517 aa18.81■□□□□ 0.6
VAMP1-207ENST00000539047 HOXA10P31260 410 aaPredicted RBP18.81■□□□□ 0.6
VAMP1-207ENST00000539047 CHRNDQ07001 517 aa18.81■□□□□ 0.6
VAMP1-207ENST00000539047 LPIN2Q92539 896 aa18.81■□□□□ 0.6
VAMP1-207ENST00000539047 C10orf71Q711Q0 1435 aa18.81■□□□□ 0.6
VAMP1-207ENST00000539047 MYH13Q9UKX3 1938 aa18.8■□□□□ 0.6
VAMP1-207ENST00000539047 H0YIN7 160 aa18.8■□□□□ 0.6
VAMP1-207ENST00000539047 BBOX1O75936 387 aa18.8■□□□□ 0.6
VAMP1-207ENST00000539047 CNTROBQ8N137 903 aa18.8■□□□□ 0.6
VAMP1-207ENST00000539047 MASTLQ96GX5 879 aa18.8■□□□□ 0.6
VAMP1-207ENST00000539047 DBNLQ9UJU6 430 aaKnown RBP18.8■□□□□ 0.6
VAMP1-207ENST00000539047 ATF5Q9Y2D1 282 aaPredicted RBP18.8■□□□□ 0.6
VAMP1-207ENST00000539047 COL4A1P02462 1669 aa18.79■□□□□ 0.6
VAMP1-207ENST00000539047 TTC39AQ5SRH9 613 aa18.79■□□□□ 0.6
VAMP1-207ENST00000539047 TSHZ3Q63HK5 1081 aa18.79■□□□□ 0.6
VAMP1-207ENST00000539047 C2CD5Q86YS7 1000 aa18.79■□□□□ 0.6
VAMP1-207ENST00000539047 VGLL2Q8N8G2 317 aa18.79■□□□□ 0.6
VAMP1-207ENST00000539047 DBNDD2Q9BQY9 259 aa18.79■□□□□ 0.6
VAMP1-207ENST00000539047 TLR7Q9NYK1 1049 aaKnown RBP18.79■□□□□ 0.6
VAMP1-207ENST00000539047 CDC45O75419 566 aa18.78■□□□□ 0.6
VAMP1-207ENST00000539047 SRGNP10124 158 aa18.78■□□□□ 0.6
VAMP1-207ENST00000539047 GSPT1P15170 499 aaKnown RBP18.78■□□□□ 0.6
VAMP1-207ENST00000539047 TIMM10P62072 90 aa18.78■□□□□ 0.6
VAMP1-207ENST00000539047 MINPP1Q9UNW1 487 aa18.78■□□□□ 0.6
VAMP1-207ENST00000539047 PPEF1O14829 653 aaPredicted RBP18.77■□□□□ 0.6
VAMP1-207ENST00000539047 ATP5JP18859 108 aa18.77■□□□□ 0.6
VAMP1-207ENST00000539047 UBE4AQ14139 1066 aa18.77■□□□□ 0.6
VAMP1-207ENST00000539047 STYK1Q6J9G0 422 aa18.77■□□□□ 0.6
VAMP1-207ENST00000539047 HELBQ8NG08 1087 aaPredicted RBP18.77■□□□□ 0.6
VAMP1-207ENST00000539047 PI4K2BQ8TCG2 481 aa18.77■□□□□ 0.6
VAMP1-207ENST00000539047 RILPL2Q969X0 211 aa18.77■□□□□ 0.6
VAMP1-207ENST00000539047 XAGE2Q96GT9 111 aa18.77■□□□□ 0.6
VAMP1-207ENST00000539047 ANKIB1Q9P2G1 1089 aa18.77■□□□□ 0.6
VAMP1-207ENST00000539047 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.77■□□□□ 0.6
VAMP1-207ENST00000539047 TAF5LO75529 589 aa18.76■□□□□ 0.59
VAMP1-207ENST00000539047 SDSP20132 328 aa18.76■□□□□ 0.59
VAMP1-207ENST00000539047 ZNF622Q969S3 477 aaKnown RBP eCLIP18.76■□□□□ 0.59
VAMP1-207ENST00000539047 XDHP47989 1333 aa18.75■□□□□ 0.59
VAMP1-207ENST00000539047 UQCRFS1P1P0C7P4 283 aa18.75■□□□□ 0.59
VAMP1-207ENST00000539047 CAVIN4Q5BKX8 364 aa18.75■□□□□ 0.59
VAMP1-207ENST00000539047 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.75■□□□□ 0.59
VAMP1-207ENST00000539047 CNKSR1Q969H4 720 aa18.75■□□□□ 0.59
VAMP1-207ENST00000539047 UPF2Q9HAU5 1272 aaKnown RBP18.75■□□□□ 0.59
VAMP1-207ENST00000539047 FGFR2P21802 821 aa18.74■□□□□ 0.59
VAMP1-207ENST00000539047 PTGER2P43116 358 aa18.74■□□□□ 0.59
VAMP1-207ENST00000539047 VPS37DQ86XT2 251 aa18.74■□□□□ 0.59
VAMP1-207ENST00000539047 EVI5LQ96CN4 794 aa18.74■□□□□ 0.59
VAMP1-207ENST00000539047 BACH2Q9BYV9 841 aa18.74■□□□□ 0.59
VAMP1-207ENST00000539047 GNL3LQ9NVN8 582 aaKnown RBP18.74■□□□□ 0.59
VAMP1-207ENST00000539047 LEMD3Q9Y2U8 911 aa18.74■□□□□ 0.59
VAMP1-207ENST00000539047 MYH7P12883 1935 aa18.73■□□□□ 0.59
VAMP1-207ENST00000539047 HIP1O00291 1037 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms