RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 PLA2G4AP47712 749 aa21.72■■□□□ 1.07
SFSWAP-207ENST00000538548 DHX8Q14562 1220 aaKnown RBP21.72■■□□□ 1.07
SFSWAP-207ENST00000538548 ARHGAP29Q52LW3 1261 aa21.72■■□□□ 1.07
SFSWAP-207ENST00000538548 ARGLU1Q9NWB6 273 aaPredicted RBP21.72■■□□□ 1.07
SFSWAP-207ENST00000538548 ZRANB2O95218 330 aaKnown RBP eCLIP21.72■■□□□ 1.07
SFSWAP-207ENST00000538548 AMPHP49418 695 aa21.72■■□□□ 1.07
SFSWAP-207ENST00000538548 FAM160A1Q05DH4 1040 aa21.72■■□□□ 1.07
SFSWAP-207ENST00000538548 KRT32Q14532 448 aa21.72■■□□□ 1.07
SFSWAP-207ENST00000538548 CEBPZQ03701 1054 aaKnown RBP21.71■■□□□ 1.07
SFSWAP-207ENST00000538548 TEX35Q5T0J7 233 aa21.71■■□□□ 1.07
SFSWAP-207ENST00000538548 LRRN4CLQ8ND94 238 aa21.71■■□□□ 1.07
SFSWAP-207ENST00000538548 ENGASEQ8NFI3 743 aa21.71■■□□□ 1.07
SFSWAP-207ENST00000538548 CHMP4AQ9BY43 222 aa21.7■■□□□ 1.06
SFSWAP-207ENST00000538548 NRDCO43847 1150 aa21.7■■□□□ 1.06
SFSWAP-207ENST00000538548 EIF2S2P20042 333 aaKnown RBP21.7■■□□□ 1.06
SFSWAP-207ENST00000538548 TMCO3Q6UWJ1 677 aa21.7■■□□□ 1.06
SFSWAP-207ENST00000538548 FSD1Q9BTV5 496 aa21.7■■□□□ 1.06
SFSWAP-207ENST00000538548 MYH15Q9Y2K3 1946 aa21.7■■□□□ 1.06
SFSWAP-207ENST00000538548 SFPQP23246 707 aaKnown RBP eCLIP21.69■■□□□ 1.06
SFSWAP-207ENST00000538548 TPM4P67936 248 aa21.69■■□□□ 1.06
SFSWAP-207ENST00000538548 ATL3Q6DD88 541 aa21.69■■□□□ 1.06
SFSWAP-207ENST00000538548 NAA16Q6N069 864 aaPredicted RBP21.69■■□□□ 1.06
SFSWAP-207ENST00000538548 PA2G4Q9UQ80 394 aaKnown RBP21.69■■□□□ 1.06
SFSWAP-207ENST00000538548 HOXB7P09629 217 aa21.69■■□□□ 1.06
SFSWAP-207ENST00000538548 CHPF2Q9P2E5 772 aa21.69■■□□□ 1.06
SFSWAP-207ENST00000538548 A0A087WWV3 80 aa21.68■■□□□ 1.06
SFSWAP-207ENST00000538548 ARMCX5Q6P1M9 558 aa21.68■■□□□ 1.06
SFSWAP-207ENST00000538548 SMARCC2Q8TAQ2 1214 aa21.68■■□□□ 1.06
SFSWAP-207ENST00000538548 USPL1Q5W0Q7 1092 aa21.68■■□□□ 1.06
SFSWAP-207ENST00000538548 UBXN4Q92575 508 aa21.68■■□□□ 1.06
SFSWAP-207ENST00000538548 ORC3Q9UBD5 711 aaPredicted RBP21.68■■□□□ 1.06
SFSWAP-207ENST00000538548 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.67■■□□□ 1.06
SFSWAP-207ENST00000538548 PHLPP2Q6ZVD8 1323 aa21.67■■□□□ 1.06
SFSWAP-207ENST00000538548 LLPHQ9BRT6 129 aaKnown RBP21.67■■□□□ 1.06
SFSWAP-207ENST00000538548 HDAC5Q9UQL6 1122 aa21.67■■□□□ 1.06
SFSWAP-207ENST00000538548 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.67■■□□□ 1.06
SFSWAP-207ENST00000538548 ETF1P62495 437 aaKnown RBP21.67■■□□□ 1.06
SFSWAP-207ENST00000538548 NUTM2GQ5VZR2 741 aa21.67■■□□□ 1.06
SFSWAP-207ENST00000538548 ZNF589Q86UQ0 364 aaPredicted RBP21.67■■□□□ 1.06
SFSWAP-207ENST00000538548 EAF2Q96CJ1 260 aaPredicted RBP21.67■■□□□ 1.06
SFSWAP-207ENST00000538548 NEK1Q96PY6 1258 aa21.67■■□□□ 1.06
SFSWAP-207ENST00000538548 CCP110O43303 1012 aa21.66■■□□□ 1.06
SFSWAP-207ENST00000538548 ATP8B1O43520 1251 aa21.66■■□□□ 1.06
SFSWAP-207ENST00000538548 TAF5LO75529 589 aa21.66■■□□□ 1.06
SFSWAP-207ENST00000538548 HSP90B1P14625 803 aaKnown RBP21.66■■□□□ 1.06
SFSWAP-207ENST00000538548 TXLNBQ8N3L3 684 aa21.66■■□□□ 1.06
SFSWAP-207ENST00000538548 BPIFA3Q9BQP9 254 aa21.66■■□□□ 1.06
SFSWAP-207ENST00000538548 SRRTQ9BXP5 876 aaKnown RBP21.66■■□□□ 1.06
SFSWAP-207ENST00000538548 TBX22Q9Y458 520 aa21.66■■□□□ 1.06
SFSWAP-207ENST00000538548 TMC6Q7Z403 805 aa21.66■■□□□ 1.06
SFSWAP-207ENST00000538548 FSIP1Q8NA03 581 aa21.66■■□□□ 1.06
SFSWAP-207ENST00000538548 ZNF396Q96N95 335 aaPredicted RBP21.66■■□□□ 1.06
SFSWAP-207ENST00000538548 FTOQ9C0B1 505 aaKnown RBP eCLIP21.66■■□□□ 1.06
SFSWAP-207ENST00000538548 XPO4Q9C0E2 1151 aaKnown RBP21.66■■□□□ 1.06
SFSWAP-207ENST00000538548 RAD51AP2Q09MP3 1159 aa21.65■■□□□ 1.06
SFSWAP-207ENST00000538548 Q6ZUG5 572 aa21.65■■□□□ 1.06
SFSWAP-207ENST00000538548 USP28Q96RU2 1077 aa21.65■■□□□ 1.06
SFSWAP-207ENST00000538548 C9orf78Q9NZ63 289 aaPredicted RBP21.65■■□□□ 1.06
SFSWAP-207ENST00000538548 ARHGAP23Q9P227 1491 aa21.65■■□□□ 1.06
SFSWAP-207ENST00000538548 SMC2O95347 1197 aa21.65■■□□□ 1.06
SFSWAP-207ENST00000538548 EIF4A1P60842 406 aaKnown RBP21.65■■□□□ 1.06
SFSWAP-207ENST00000538548 MUM1L1Q5H9M0 696 aa21.65■■□□□ 1.06
SFSWAP-207ENST00000538548 ALDH1L1O75891 902 aa21.64■■□□□ 1.06
SFSWAP-207ENST00000538548 SASH1O94885 1247 aa21.64■■□□□ 1.06
SFSWAP-207ENST00000538548 SCRN1Q12765 414 aa21.64■■□□□ 1.06
SFSWAP-207ENST00000538548 ANKLE2Q86XL3 938 aa21.64■■□□□ 1.06
SFSWAP-207ENST00000538548 HOMER1Q86YM7 354 aa21.64■■□□□ 1.06
SFSWAP-207ENST00000538548 SYTL4Q96C24 671 aaPredicted RBP21.64■■□□□ 1.06
SFSWAP-207ENST00000538548 BOLA2Q9H3K6 86 aa21.64■■□□□ 1.06
SFSWAP-207ENST00000538548 FEZ2Q9UHY8 353 aaPredicted RBP21.64■■□□□ 1.06
SFSWAP-207ENST00000538548 SLIT1O75093 1534 aa21.64■■□□□ 1.05
SFSWAP-207ENST00000538548 TPM1P09493 284 aa21.64■■□□□ 1.05
SFSWAP-207ENST00000538548 UBXN6Q9BZV1 441 aa21.64■■□□□ 1.05
SFSWAP-207ENST00000538548 CCDC8Q9H0W5 538 aaPredicted RBP21.64■■□□□ 1.05
SFSWAP-207ENST00000538548 IFNKQ9P0W0 207 aa21.64■■□□□ 1.05
SFSWAP-207ENST00000538548 ME1P48163 572 aa21.63■■□□□ 1.05
SFSWAP-207ENST00000538548 NWD1Q149M9 1564 aa21.63■■□□□ 1.05
SFSWAP-207ENST00000538548 FMR1NBQ8N0W7 255 aaPredicted RBP21.63■■□□□ 1.05
SFSWAP-207ENST00000538548 MNS1Q8NEH6 495 aa21.63■■□□□ 1.05
SFSWAP-207ENST00000538548 G3BP1Q13283 466 aaKnown RBP eCLIP21.62■■□□□ 1.05
SFSWAP-207ENST00000538548 MRPS27Q92552 414 aaKnown RBP21.62■■□□□ 1.05
SFSWAP-207ENST00000538548 SDF4Q9BRK5 362 aa21.62■■□□□ 1.05
SFSWAP-207ENST00000538548 DNAI1Q9UI46 699 aa21.62■■□□□ 1.05
SFSWAP-207ENST00000538548 EFCAB8A8MWE9 144 aa21.62■■□□□ 1.05
SFSWAP-207ENST00000538548 PFKFB2O60825 505 aa21.62■■□□□ 1.05
SFSWAP-207ENST00000538548 TADA3O75528 432 aa21.62■■□□□ 1.05
SFSWAP-207ENST00000538548 ZRSR1Q15695 479 aaKnown RBP21.62■■□□□ 1.05
SFSWAP-207ENST00000538548 NSUN7Q8NE18 718 aaKnown RBP21.62■■□□□ 1.05
SFSWAP-207ENST00000538548 ERCC4Q92889 916 aaPredicted RBP21.62■■□□□ 1.05
SFSWAP-207ENST00000538548 CEMIPQ8WUJ3 1361 aa21.62■■□□□ 1.05
SFSWAP-207ENST00000538548 FBXW7Q969H0 707 aa21.61■■□□□ 1.05
SFSWAP-207ENST00000538548 TRERF1Q96PN7 1200 aa21.61■■□□□ 1.05
SFSWAP-207ENST00000538548 TRIM34Q9BYJ4 488 aa21.61■■□□□ 1.05
SFSWAP-207ENST00000538548 TLR7Q9NYK1 1049 aaKnown RBP21.61■■□□□ 1.05
SFSWAP-207ENST00000538548 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.61■■□□□ 1.05
SFSWAP-207ENST00000538548 POLR3GO15318 223 aaPredicted RBP21.61■■□□□ 1.05
SFSWAP-207ENST00000538548 DPCR1Q3MIW9 517 aa21.61■■□□□ 1.05
SFSWAP-207ENST00000538548 GORABQ5T7V8 394 aa21.61■■□□□ 1.05
SFSWAP-207ENST00000538548 NEK11Q8NG66 645 aa21.61■■□□□ 1.05
SFSWAP-207ENST00000538548 GPS2Q13227 327 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms