RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 MVPQ14764 893 aaKnown RBP4.39□□□□□ -1.71
PTPN22-211ENST00000538253 PDIA6Q15084 440 aa4.39□□□□□ -1.71
PTPN22-211ENST00000538253 CRY2Q49AN0 593 aa4.39□□□□□ -1.71
PTPN22-211ENST00000538253 BEND3Q5T5X7 828 aa4.39□□□□□ -1.71
PTPN22-211ENST00000538253 SYT17Q9BSW7 474 aa4.39□□□□□ -1.71
PTPN22-211ENST00000538253 BSDC1Q9NW68 430 aaPredicted RBP4.39□□□□□ -1.71
PTPN22-211ENST00000538253 NOB1Q9ULX3 412 aaKnown RBP4.39□□□□□ -1.71
PTPN22-211ENST00000538253 BCS1LQ9Y276 419 aa4.39□□□□□ -1.71
PTPN22-211ENST00000538253 ATP6V0A2Q9Y487 856 aa4.39□□□□□ -1.71
PTPN22-211ENST00000538253 ABCC4O15439 1325 aa4.39□□□□□ -1.71
PTPN22-211ENST00000538253 POTEMA6NI47 508 aa4.39□□□□□ -1.71
PTPN22-211ENST00000538253 NT5C2P49902 561 aa4.39□□□□□ -1.71
PTPN22-211ENST00000538253 ZSCAN25Q6NSZ9 544 aa4.39□□□□□ -1.71
PTPN22-211ENST00000538253 C4AP0C0L4 1744 aa4.38□□□□□ -1.71
PTPN22-211ENST00000538253 TJP1Q07157 1748 aa4.38□□□□□ -1.71
PTPN22-211ENST00000538253 SRGNP10124 158 aa4.38□□□□□ -1.71
PTPN22-211ENST00000538253 RGS3P49796 1198 aa4.38□□□□□ -1.71
PTPN22-211ENST00000538253 FKBP1AP62942 108 aaKnown RBP4.38□□□□□ -1.71
PTPN22-211ENST00000538253 GSTO1P78417 241 aa4.38□□□□□ -1.71
PTPN22-211ENST00000538253 MTX1Q13505 466 aa4.38□□□□□ -1.71
PTPN22-211ENST00000538253 MSL1Q68DK7 614 aa4.38□□□□□ -1.71
PTPN22-211ENST00000538253 C15orf52Q6ZUT6 534 aaKnown RBP4.38□□□□□ -1.71
PTPN22-211ENST00000538253 UBE3BQ7Z3V4 1068 aa4.38□□□□□ -1.71
PTPN22-211ENST00000538253 GCC1Q96CN9 775 aa4.38□□□□□ -1.71
PTPN22-211ENST00000538253 PLCD4Q9BRC7 762 aa4.38□□□□□ -1.71
PTPN22-211ENST00000538253 FHDC1Q9C0D6 1143 aaPredicted RBP4.38□□□□□ -1.71
PTPN22-211ENST00000538253 TMOD2Q9NZR1 351 aa4.38□□□□□ -1.71
PTPN22-211ENST00000538253 ANKIB1Q9P2G1 1089 aa4.38□□□□□ -1.71
PTPN22-211ENST00000538253 SCN7AQ01118 1682 aa4.38□□□□□ -1.71
PTPN22-211ENST00000538253 COL5A3P25940 1745 aaPredicted RBP4.38□□□□□ -1.71
PTPN22-211ENST00000538253 ERC2O15083 957 aa4.38□□□□□ -1.71
PTPN22-211ENST00000538253 PTGER2P43116 358 aa4.38□□□□□ -1.71
PTPN22-211ENST00000538253 CCDC158Q5M9N0 1113 aa4.38□□□□□ -1.71
PTPN22-211ENST00000538253 SUSD4Q5VX71 490 aa4.38□□□□□ -1.71
PTPN22-211ENST00000538253 ARHGAP27Q6ZUM4 889 aa4.38□□□□□ -1.71
PTPN22-211ENST00000538253 PODNQ7Z5L7 613 aa4.38□□□□□ -1.71
PTPN22-211ENST00000538253 ZNF526Q8TF50 670 aaPredicted RBP4.38□□□□□ -1.71
PTPN22-211ENST00000538253 COA1Q9GZY4 146 aa4.38□□□□□ -1.71
PTPN22-211ENST00000538253 CWC22Q9HCG8 908 aaKnown RBP4.38□□□□□ -1.71
PTPN22-211ENST00000538253 DPEP1P16444 411 aa4.38□□□□□ -1.71
PTPN22-211ENST00000538253 HSP90AA2PQ14568 343 aaPredicted RBP4.38□□□□□ -1.71
PTPN22-211ENST00000538253 LDHAL6AQ6ZMR3 332 aa4.38□□□□□ -1.71
PTPN22-211ENST00000538253 ZNF830Q96NB3 372 aaPredicted RBP4.38□□□□□ -1.71
PTPN22-211ENST00000538253 SGIP1Q9BQI5 828 aa4.38□□□□□ -1.71
PTPN22-211ENST00000538253 MYO1BO43795 1136 aa4.37□□□□□ -1.71
PTPN22-211ENST00000538253 FRAT2O75474 233 aaPredicted RBP4.37□□□□□ -1.71
PTPN22-211ENST00000538253 CSF1RP07333 972 aa4.37□□□□□ -1.71
PTPN22-211ENST00000538253 RRP1P56182 461 aaKnown RBP4.37□□□□□ -1.71
PTPN22-211ENST00000538253 DDR1Q08345 913 aa4.37□□□□□ -1.71
PTPN22-211ENST00000538253 TTF1Q15361 905 aaPredicted RBP4.37□□□□□ -1.71
PTPN22-211ENST00000538253 ERFEQ4G0M1 354 aa4.37□□□□□ -1.71
PTPN22-211ENST00000538253 METTL24Q5JXM2 366 aa4.37□□□□□ -1.71
PTPN22-211ENST00000538253 PPP4R3BQ5MIZ7 849 aa4.37□□□□□ -1.71
PTPN22-211ENST00000538253 PNMA8AQ86V59 439 aaPredicted RBP4.37□□□□□ -1.71
PTPN22-211ENST00000538253 AMOTL1Q8IY63 956 aa4.37□□□□□ -1.71
PTPN22-211ENST00000538253 CLASRPQ8N2M8 674 aaKnown RBP4.37□□□□□ -1.71
PTPN22-211ENST00000538253 LARGE2Q8N3Y3 721 aa4.37□□□□□ -1.71
PTPN22-211ENST00000538253 OGFOD1Q8N543 542 aa4.37□□□□□ -1.71
PTPN22-211ENST00000538253 TSPYL6Q8N831 410 aa4.37□□□□□ -1.71
PTPN22-211ENST00000538253 WDR66Q8TBY9 1149 aa4.37□□□□□ -1.71
PTPN22-211ENST00000538253 KIF1BPQ96EK5 621 aa4.37□□□□□ -1.71
PTPN22-211ENST00000538253 DDRGK1Q96HY6 314 aa4.37□□□□□ -1.71
PTPN22-211ENST00000538253 BCL2L12Q9HB09 334 aa4.37□□□□□ -1.71
PTPN22-211ENST00000538253 ATP5J2-PTCD1G3V325 749 aa4.37□□□□□ -1.71
PTPN22-211ENST00000538253 C6orf229H3BNL8 230 aa4.37□□□□□ -1.71
PTPN22-211ENST00000538253 H7C1D1 291 aa4.37□□□□□ -1.71
PTPN22-211ENST00000538253 EYA2O00167 538 aa4.37□□□□□ -1.71
PTPN22-211ENST00000538253 RRP9O43818 475 aaKnown RBP4.37□□□□□ -1.71
PTPN22-211ENST00000538253 WDHD1O75717 1129 aaPredicted RBP4.37□□□□□ -1.71
PTPN22-211ENST00000538253 PLCG2P16885 1265 aa4.37□□□□□ -1.71
PTPN22-211ENST00000538253 PUM3Q15397 648 aaKnown RBP4.37□□□□□ -1.71
PTPN22-211ENST00000538253 RABL6Q3YEC7 729 aaPredicted RBP4.37□□□□□ -1.71
PTPN22-211ENST00000538253 PRPF40BQ6NWY9 871 aaKnown RBP4.37□□□□□ -1.71
PTPN22-211ENST00000538253 PHAXQ9H814 394 aaKnown RBP4.37□□□□□ -1.71
PTPN22-211ENST00000538253 COPRSQ9NQ92 184 aa4.37□□□□□ -1.71
PTPN22-211ENST00000538253 ABCC12Q96J65 1359 aa4.37□□□□□ -1.71
PTPN22-211ENST00000538253 FAM177BA6PVY3 158 aa4.37□□□□□ -1.71
PTPN22-211ENST00000538253 PATL2C9JE40 543 aaKnown RBP4.37□□□□□ -1.71
PTPN22-211ENST00000538253 HIP1O00291 1037 aa4.37□□□□□ -1.71
PTPN22-211ENST00000538253 DSG3P32926 999 aa4.37□□□□□ -1.71
PTPN22-211ENST00000538253 NF2P35240 595 aa4.37□□□□□ -1.71
PTPN22-211ENST00000538253 TNNI2P48788 182 aa4.37□□□□□ -1.71
PTPN22-211ENST00000538253 MFAP1P55081 439 aaKnown RBP4.37□□□□□ -1.71
PTPN22-211ENST00000538253 ATP8B2P98198 1209 aa4.37□□□□□ -1.71
PTPN22-211ENST00000538253 HLFQ16534 295 aa4.37□□□□□ -1.71
PTPN22-211ENST00000538253 PDS5AQ29RF7 1337 aaKnown RBP4.37□□□□□ -1.71
PTPN22-211ENST00000538253 PTF1AQ7RTS3 328 aa4.37□□□□□ -1.71
PTPN22-211ENST00000538253 LPIN2Q92539 896 aa4.37□□□□□ -1.71
PTPN22-211ENST00000538253 DENND2AQ9ULE3 1009 aa4.37□□□□□ -1.71
PTPN22-211ENST00000538253 DLG5Q8TDM6 1919 aa4.36□□□□□ -1.71
PTPN22-211ENST00000538253 ADCY9O60503 1353 aa4.36□□□□□ -1.71
PTPN22-211ENST00000538253 MED23Q9ULK4 1368 aa4.36□□□□□ -1.71
PTPN22-211ENST00000538253 PPIP5K2O43314 1243 aa4.36□□□□□ -1.71
PTPN22-211ENST00000538253 ITGA6P23229 1130 aa4.36□□□□□ -1.71
PTPN22-211ENST00000538253 IARSP41252 1262 aaKnown RBP4.36□□□□□ -1.71
PTPN22-211ENST00000538253 FAM193AP78312 1265 aa4.36□□□□□ -1.71
PTPN22-211ENST00000538253 HDLBPQ00341 1268 aaKnown RBP4.36□□□□□ -1.71
PTPN22-211ENST00000538253 TNFAIP1Q13829 316 aa4.36□□□□□ -1.71
PTPN22-211ENST00000538253 CASC1Q6TDU7 716 aa4.36□□□□□ -1.71
PTPN22-211ENST00000538253 LMBR1LQ6UX01 489 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms