RNA–Protein interactions for RNA: ENST00000536742.5

CCDC60-203, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC60, Length 886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-203ENST00000536742 SV2AQ7L0J3 742 aa10.37□□□□□ -0.75
CCDC60-203ENST00000536742 VWA5B2Q8N398 1253 aa10.37□□□□□ -0.75
CCDC60-203ENST00000536742 SLIT2O94813 1529 aa10.37□□□□□ -0.75
CCDC60-203ENST00000536742 IDI1Q13907 227 aa10.36□□□□□ -0.75
CCDC60-203ENST00000536742 SLC27A3Q5K4L6 730 aa10.36□□□□□ -0.75
CCDC60-203ENST00000536742 SYT17Q9BSW7 474 aa10.36□□□□□ -0.75
CCDC60-203ENST00000536742 FHDC1Q9C0D6 1143 aaPredicted RBP10.36□□□□□ -0.75
CCDC60-203ENST00000536742 SCHIP1Q9P0W5 487 aaPredicted RBP10.36□□□□□ -0.75
CCDC60-203ENST00000536742 SERTAD1Q9UHV2 236 aa10.36□□□□□ -0.75
CCDC60-203ENST00000536742 IGFBP4P22692 258 aa10.35□□□□□ -0.75
CCDC60-203ENST00000536742 FOXK2Q01167 660 aa10.35□□□□□ -0.75
CCDC60-203ENST00000536742 WDR44Q5JSH3 913 aa10.35□□□□□ -0.75
CCDC60-203ENST00000536742 PPARGC1BQ86YN6 1023 aaKnown RBP10.35□□□□□ -0.75
CCDC60-203ENST00000536742 STAG2Q8N3U4 1231 aa10.35□□□□□ -0.75
CCDC60-203ENST00000536742 TSEN2Q8NCE0 465 aaKnown RBP10.35□□□□□ -0.75
CCDC60-203ENST00000536742 ZSCAN10Q96SZ4 725 aaPredicted RBP10.35□□□□□ -0.75
CCDC60-203ENST00000536742 HINFPQ9BQA5 517 aa10.35□□□□□ -0.75
CCDC60-203ENST00000536742 GRIP2Q9C0E4 1043 aa10.35□□□□□ -0.75
CCDC60-203ENST00000536742 CCNB3Q8WWL7 1395 aa10.35□□□□□ -0.75
CCDC60-203ENST00000536742 TNS1Q9HBL0 1735 aaKnown RBP10.35□□□□□ -0.75
CCDC60-203ENST00000536742 ADGRB3O60242 1522 aa10.34□□□□□ -0.75
CCDC60-203ENST00000536742 PATL2C9JE40 543 aaKnown RBP10.34□□□□□ -0.75
CCDC60-203ENST00000536742 GPR161Q8N6U8 529 aaKnown RBP10.34□□□□□ -0.75
CCDC60-203ENST00000536742 C1orf216Q8TAB5 229 aa10.34□□□□□ -0.75
CCDC60-203ENST00000536742 CNTNAP3BQ96NU0 1288 aa10.34□□□□□ -0.75
CCDC60-203ENST00000536742 COL25A1Q9BXS0 654 aaPredicted RBP10.34□□□□□ -0.75
CCDC60-203ENST00000536742 CNTNAP3Q9BZ76 1288 aa10.34□□□□□ -0.75
CCDC60-203ENST00000536742 CHMP3Q9Y3E7 222 aa10.34□□□□□ -0.75
CCDC60-203ENST00000536742 CCDC9Q9Y3X0 531 aaKnown RBP10.34□□□□□ -0.75
CCDC60-203ENST00000536742 AATKQ6ZMQ8 1374 aa10.34□□□□□ -0.75
CCDC60-203ENST00000536742 CEP152O94986 1710 aa10.33□□□□□ -0.76
CCDC60-203ENST00000536742 SPATA31C2B4DYI2 1134 aa10.33□□□□□ -0.76
CCDC60-203ENST00000536742 RHOQP17081 205 aa10.33□□□□□ -0.76
CCDC60-203ENST00000536742 LORP23490 312 aaPredicted RBP10.33□□□□□ -0.76
CCDC60-203ENST00000536742 WEE1P30291 646 aa10.33□□□□□ -0.76
CCDC60-203ENST00000536742 GNASQ5JWF2 1037 aa10.33□□□□□ -0.76
CCDC60-203ENST00000536742 AMOTL2Q9Y2J4 779 aa10.33□□□□□ -0.76
CCDC60-203ENST00000536742 MTUS2Q5JR59 1369 aa10.33□□□□□ -0.76
CCDC60-203ENST00000536742 SHANK3Q9BYB0 1731 aa10.33□□□□□ -0.76
CCDC60-203ENST00000536742 NRKQ7Z2Y5 1582 aa10.32□□□□□ -0.76
CCDC60-203ENST00000536742 FOXO3O43524 673 aa10.32□□□□□ -0.76
CCDC60-203ENST00000536742 BRD1O95696 1058 aa10.32□□□□□ -0.76
CCDC60-203ENST00000536742 STAU1O95793 577 aaKnown RBP10.32□□□□□ -0.76
CCDC60-203ENST00000536742 APBA3O96018 575 aa10.32□□□□□ -0.76
CCDC60-203ENST00000536742 DNAJC5GQ8N7S2 189 aa10.32□□□□□ -0.76
CCDC60-203ENST00000536742 RHBDD1Q8TEB9 315 aa10.32□□□□□ -0.76
CCDC60-203ENST00000536742 IQSEC3Q9UPP2 1182 aaPredicted RBP10.32□□□□□ -0.76
CCDC60-203ENST00000536742 RREB1Q92766 1687 aa10.31□□□□□ -0.76
CCDC60-203ENST00000536742 PSMA6P60900 246 aaKnown RBP10.31□□□□□ -0.76
CCDC60-203ENST00000536742 TMEM214Q6NUQ4 689 aaKnown RBP10.31□□□□□ -0.76
CCDC60-203ENST00000536742 NIFKQ9BYG3 293 aaKnown RBP10.31□□□□□ -0.76
CCDC60-203ENST00000536742 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.31□□□□□ -0.76
CCDC60-203ENST00000536742 DLC1Q96QB1 1528 aa10.31□□□□□ -0.76
CCDC60-203ENST00000536742 ZNF644Q9H582 1327 aaPredicted RBP10.31□□□□□ -0.76
CCDC60-203ENST00000536742 CCDC141Q6ZP82 1450 aa10.3□□□□□ -0.76
CCDC60-203ENST00000536742 NUP188Q5SRE5 1749 aa10.3□□□□□ -0.76
CCDC60-203ENST00000536742 EIF2AK4Q9P2K8 1649 aaKnown RBP10.3□□□□□ -0.76
CCDC60-203ENST00000536742 TRPM2O94759 1503 aa10.3□□□□□ -0.76
CCDC60-203ENST00000536742 EHBP1L1Q8N3D4 1523 aa10.3□□□□□ -0.76
CCDC60-203ENST00000536742 GPR162Q16538 588 aa10.3□□□□□ -0.76
CCDC60-203ENST00000536742 SLC9A9Q8IVB4 645 aa10.3□□□□□ -0.76
CCDC60-203ENST00000536742 KCTD17Q8N5Z5 321 aa10.3□□□□□ -0.76
CCDC60-203ENST00000536742 COL26A1Q96A83 441 aa10.3□□□□□ -0.76
CCDC60-203ENST00000536742 CXXC1Q9P0U4 656 aaPredicted RBP10.3□□□□□ -0.76
CCDC60-203ENST00000536742 WWC3Q9ULE0 1092 aa10.3□□□□□ -0.76
CCDC60-203ENST00000536742 ATP2B4P23634 1241 aa10.29□□□□□ -0.76
CCDC60-203ENST00000536742 SSFA2P28290 1259 aa10.29□□□□□ -0.76
CCDC60-203ENST00000536742 HIRAP54198 1017 aaPredicted RBP10.29□□□□□ -0.76
CCDC60-203ENST00000536742 POU4F2Q12837 409 aa10.29□□□□□ -0.76
CCDC60-203ENST00000536742 TEAD4Q15561 434 aa10.29□□□□□ -0.76
CCDC60-203ENST00000536742 OCLNQ16625 522 aa10.29□□□□□ -0.76
CCDC60-203ENST00000536742 RIPOR1Q6ZS17 1223 aa10.29□□□□□ -0.76
CCDC60-203ENST00000536742 TSPAN10Q9H1Z9 355 aaPredicted RBP10.29□□□□□ -0.76
CCDC60-203ENST00000536742 MTMR7Q9Y216 660 aa10.29□□□□□ -0.76
CCDC60-203ENST00000536742 C1orf167Q5SNV9 1468 aa10.29□□□□□ -0.76
CCDC60-203ENST00000536742 ZFYVE9O95405 1425 aa10.28□□□□□ -0.76
CCDC60-203ENST00000536742 TRIM37O94972 964 aa10.28□□□□□ -0.76
CCDC60-203ENST00000536742 TSPY4P0CV99 314 aa10.28□□□□□ -0.76
CCDC60-203ENST00000536742 TSPY10P0CW01 314 aa10.28□□□□□ -0.76
CCDC60-203ENST00000536742 KRT76Q01546 638 aa10.28□□□□□ -0.76
CCDC60-203ENST00000536742 FOXR1Q6PIV2 292 aa10.28□□□□□ -0.76
CCDC60-203ENST00000536742 TAS1R3Q7RTX0 852 aa10.28□□□□□ -0.76
CCDC60-203ENST00000536742 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.28□□□□□ -0.76
CCDC60-203ENST00000536742 SLC52A1Q9NWF4 448 aa10.28□□□□□ -0.76
CCDC60-203ENST00000536742 MYOM1P52179 1685 aa10.28□□□□□ -0.76
CCDC60-203ENST00000536742 PPP1R12BO60237 982 aaPredicted RBP10.27□□□□□ -0.77
CCDC60-203ENST00000536742 PTCD1O75127 700 aaKnown RBP10.27□□□□□ -0.77
CCDC60-203ENST00000536742 FAM182BQ5T319 152 aa10.27□□□□□ -0.77
CCDC60-203ENST00000536742 FAM196AQ6ZSG2 479 aa10.27□□□□□ -0.77
CCDC60-203ENST00000536742 SCG3Q8WXD2 468 aaKnown RBP10.27□□□□□ -0.77
CCDC60-203ENST00000536742 GMCL1Q96IK5 515 aa10.27□□□□□ -0.77
CCDC60-203ENST00000536742 GAS2L1Q99501 681 aaPredicted RBP10.27□□□□□ -0.77
CCDC60-203ENST00000536742 DYRK1BQ9Y463 629 aa10.27□□□□□ -0.77
CCDC60-203ENST00000536742 FYCO1Q9BQS8 1478 aa10.27□□□□□ -0.77
CCDC60-203ENST00000536742 NOS1P29475 1434 aa10.26□□□□□ -0.77
CCDC60-203ENST00000536742 ADAMTS13Q76LX8 1427 aa10.26□□□□□ -0.77
CCDC60-203ENST00000536742 ADGRL3Q9HAR2 1447 aa10.26□□□□□ -0.77
CCDC60-203ENST00000536742 KCNA1Q09470 495 aa10.26□□□□□ -0.77
CCDC60-203ENST00000536742 RNFT1Q5M7Z0 435 aa10.26□□□□□ -0.77
CCDC60-203ENST00000536742 NBPF10Q6P3W6 841 aaKnown RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms