RNA–Protein interactions for RNA: ENST00000536400.5

PRKCH-202, Transcript of protein kinase C eta, humanhuman

TSL 2

Gene PRKCH, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-202ENST00000536400 WASHC4Q2M389 1173 aa9.86□□□□□ -0.83
PRKCH-202ENST00000536400 KIF4BQ2VIQ3 1234 aa9.86□□□□□ -0.83
PRKCH-202ENST00000536400 RBM26Q5T8P6 1007 aaKnown RBP9.86□□□□□ -0.83
PRKCH-202ENST00000536400 NLRP10Q86W26 655 aa9.86□□□□□ -0.83
PRKCH-202ENST00000536400 SULF1Q8IWU6 871 aa9.86□□□□□ -0.83
PRKCH-202ENST00000536400 DDX60Q8IY21 1712 aaKnown RBP9.86□□□□□ -0.83
PRKCH-202ENST00000536400 ZNF296Q8WUU4 475 aaPredicted RBP9.86□□□□□ -0.83
PRKCH-202ENST00000536400 CDCA5Q96FF9 252 aa9.86□□□□□ -0.83
PRKCH-202ENST00000536400 THUMPD2Q9BTF0 503 aaKnown RBP9.86□□□□□ -0.83
PRKCH-202ENST00000536400 PCGF6Q9BYE7 350 aa9.86□□□□□ -0.83
PRKCH-202ENST00000536400 KCNQ5Q9NR82 932 aa9.86□□□□□ -0.83
PRKCH-202ENST00000536400 GGA3Q9NZ52 723 aa9.86□□□□□ -0.83
PRKCH-202ENST00000536400 KIAA0100Q14667 2235 aaKnown RBP9.86□□□□□ -0.83
PRKCH-202ENST00000536400 PAPPA2Q9BXP8 1791 aa9.86□□□□□ -0.83
PRKCH-202ENST00000536400 ASTN2O75129 1339 aaPredicted RBP9.85□□□□□ -0.83
PRKCH-202ENST00000536400 ECE2O60344 883 aa9.85□□□□□ -0.83
PRKCH-202ENST00000536400 FKBP1BP68106 108 aa9.85□□□□□ -0.83
PRKCH-202ENST00000536400 HSP90AB3PQ58FF7 597 aa9.85□□□□□ -0.83
PRKCH-202ENST00000536400 NOM1Q5C9Z4 860 aaKnown RBP9.85□□□□□ -0.83
PRKCH-202ENST00000536400 HABP4Q5JVS0 413 aaKnown RBP9.85□□□□□ -0.83
PRKCH-202ENST00000536400 POLLQ9UGP5 575 aa9.85□□□□□ -0.83
PRKCH-202ENST00000536400 HDAC9Q9UKV0 1011 aa9.85□□□□□ -0.83
PRKCH-202ENST00000536400 SH3TC1Q8TE82 1336 aa9.84□□□□□ -0.83
PRKCH-202ENST00000536400 RIMBP2O15034 1052 aa9.84□□□□□ -0.83
PRKCH-202ENST00000536400 VIL1P09327 827 aaKnown RBP9.84□□□□□ -0.83
PRKCH-202ENST00000536400 PROSER3Q2NL68 480 aa9.84□□□□□ -0.83
PRKCH-202ENST00000536400 FBXO46Q6PJ61 603 aaPredicted RBP9.84□□□□□ -0.83
PRKCH-202ENST00000536400 NSFL1CQ9UNZ2 370 aaKnown RBP9.84□□□□□ -0.83
PRKCH-202ENST00000536400 COL4A1P02462 1669 aa9.83□□□□□ -0.84
PRKCH-202ENST00000536400 ZNF609O15014 1411 aa9.83□□□□□ -0.84
PRKCH-202ENST00000536400 GPR25O00155 361 aa9.83□□□□□ -0.84
PRKCH-202ENST00000536400 TBC1D8O95759 1140 aa9.83□□□□□ -0.84
PRKCH-202ENST00000536400 ANXA1P04083 346 aa9.83□□□□□ -0.84
PRKCH-202ENST00000536400 PPP2R1AP30153 589 aa9.83□□□□□ -0.84
PRKCH-202ENST00000536400 TM4SF4P48230 202 aa9.83□□□□□ -0.84
PRKCH-202ENST00000536400 ZNF280AP59817 542 aaPredicted RBP9.83□□□□□ -0.84
PRKCH-202ENST00000536400 GPSM2P81274 684 aa9.83□□□□□ -0.84
PRKCH-202ENST00000536400 TCIRG1Q13488 830 aa9.83□□□□□ -0.84
PRKCH-202ENST00000536400 DOK7Q18PE1 504 aa9.83□□□□□ -0.84
PRKCH-202ENST00000536400 CELF1Q92879 486 aaKnown RBP9.83□□□□□ -0.84
PRKCH-202ENST00000536400 TRMT112Q9UI30 125 aaKnown RBP9.83□□□□□ -0.84
PRKCH-202ENST00000536400 PSME4Q14997 1843 aa9.83□□□□□ -0.84
PRKCH-202ENST00000536400 C6orf229H3BNL8 230 aa9.82□□□□□ -0.84
PRKCH-202ENST00000536400 SCARF1Q14162 830 aa9.82□□□□□ -0.84
PRKCH-202ENST00000536400 SF3B3Q15393 1217 aaKnown RBP9.82□□□□□ -0.84
PRKCH-202ENST00000536400 ANGEL2Q5VTE6 544 aaKnown RBP9.82□□□□□ -0.84
PRKCH-202ENST00000536400 COPS6Q7L5N1 327 aa9.82□□□□□ -0.84
PRKCH-202ENST00000536400 TBC1D16Q8TBP0 767 aa9.82□□□□□ -0.84
PRKCH-202ENST00000536400 PLEKHF1Q96S99 279 aa9.82□□□□□ -0.84
PRKCH-202ENST00000536400 EYA3Q99504 573 aa9.82□□□□□ -0.84
PRKCH-202ENST00000536400 CFHR5Q9BXR6 569 aa9.82□□□□□ -0.84
PRKCH-202ENST00000536400 EIF2S2P20042 333 aaKnown RBP9.81□□□□□ -0.84
PRKCH-202ENST00000536400 NFE2L2Q16236 605 aa9.81□□□□□ -0.84
PRKCH-202ENST00000536400 MOB2Q70IA6 237 aa9.81□□□□□ -0.84
PRKCH-202ENST00000536400 IFNLR1Q8IU57 520 aaPredicted RBP9.81□□□□□ -0.84
PRKCH-202ENST00000536400 AGBL3Q8NEM8 1001 aa9.81□□□□□ -0.84
PRKCH-202ENST00000536400 XAGE3Q8WTP9 111 aa9.81□□□□□ -0.84
PRKCH-202ENST00000536400 NECTIN2Q92692 538 aa9.81□□□□□ -0.84
PRKCH-202ENST00000536400 PITPNM2Q9BZ72 1349 aa9.81□□□□□ -0.84
PRKCH-202ENST00000536400 UBE2Q2LH0YL09 131 aa9.8□□□□□ -0.84
PRKCH-202ENST00000536400 RSBN1LQ6PCB5 846 aaPredicted RBP9.8□□□□□ -0.84
PRKCH-202ENST00000536400 GMLQ99445 158 aa9.8□□□□□ -0.84
PRKCH-202ENST00000536400 ZC3H12CQ9C0D7 883 aaKnown RBP9.8□□□□□ -0.84
PRKCH-202ENST00000536400 R3HDMLQ9H3Y0 253 aa9.8□□□□□ -0.84
PRKCH-202ENST00000536400 PODXL2Q9NZ53 605 aa9.8□□□□□ -0.84
PRKCH-202ENST00000536400 TSPYL4Q9UJ04 414 aa9.8□□□□□ -0.84
PRKCH-202ENST00000536400 RBBP6Q7Z6E9 1792 aaKnown RBP9.8□□□□□ -0.84
PRKCH-202ENST00000536400 FKTNO75072 461 aa9.79□□□□□ -0.84
PRKCH-202ENST00000536400 NEFMP07197 916 aa9.79□□□□□ -0.84
PRKCH-202ENST00000536400 FXR1P51114 621 aaKnown RBP eCLIP9.79□□□□□ -0.84
PRKCH-202ENST00000536400 AIMP1Q12904 312 aaKnown RBP9.79□□□□□ -0.84
PRKCH-202ENST00000536400 MYOZ2Q9NPC6 264 aa9.79□□□□□ -0.84
PRKCH-202ENST00000536400 POTEFA5A3E0 1075 aa9.78□□□□□ -0.84
PRKCH-202ENST00000536400 USP17L8P0C7I0 530 aa9.78□□□□□ -0.84
PRKCH-202ENST00000536400 RPS8P62241 208 aaKnown RBP9.78□□□□□ -0.84
PRKCH-202ENST00000536400 SREBF2Q12772 1141 aa9.78□□□□□ -0.84
PRKCH-202ENST00000536400 INTS3Q68E01 1043 aaKnown RBP9.78□□□□□ -0.84
PRKCH-202ENST00000536400 ZNF428Q96B54 188 aa9.78□□□□□ -0.84
PRKCH-202ENST00000536400 FAM89AQ96GI7 184 aa9.78□□□□□ -0.84
PRKCH-202ENST00000536400 ISCA1Q9BUE6 129 aa9.78□□□□□ -0.84
PRKCH-202ENST00000536400 BABAM1Q9NWV8 329 aa9.78□□□□□ -0.84
PRKCH-202ENST00000536400 SCAF8Q9UPN6 1271 aaKnown RBP9.78□□□□□ -0.84
PRKCH-202ENST00000536400 CEP290O15078 2479 aa9.78□□□□□ -0.84
PRKCH-202ENST00000536400 TRIOBPQ9H2D6 2365 aa9.77□□□□□ -0.85
PRKCH-202ENST00000536400 PRAMEF18Q5VWM3 479 aa9.77□□□□□ -0.85
PRKCH-202ENST00000536400 RANBP2P49792 3224 aaKnown RBP9.77□□□□□ -0.85
PRKCH-202ENST00000536400 UFL1O94874 794 aa9.76□□□□□ -0.85
PRKCH-202ENST00000536400 MKRN3Q13064 507 aaKnown RBP9.76□□□□□ -0.85
PRKCH-202ENST00000536400 TRIM28Q13263 835 aaKnown RBP9.76□□□□□ -0.85
PRKCH-202ENST00000536400 NBPF9Q3BBW0 867 aa9.76□□□□□ -0.85
PRKCH-202ENST00000536400 PLBD2Q8NHP8 589 aa9.76□□□□□ -0.85
PRKCH-202ENST00000536400 GGA1Q9UJY5 639 aa9.76□□□□□ -0.85
PRKCH-202ENST00000536400 TRIM17Q9Y577 477 aa9.76□□□□□ -0.85
PRKCH-202ENST00000536400 ZNF646O15015 1829 aaPredicted RBP9.76□□□□□ -0.85
PRKCH-202ENST00000536400 LAMB1P07942 1786 aa9.75□□□□□ -0.85
PRKCH-202ENST00000536400 USP17L3A6NCW0 530 aa9.75□□□□□ -0.85
PRKCH-202ENST00000536400 USP17L4A6NCW7 530 aa9.75□□□□□ -0.85
PRKCH-202ENST00000536400 ATP5J2-PTCD1G3V325 749 aa9.75□□□□□ -0.85
PRKCH-202ENST00000536400 G3V3G9 751 aa9.75□□□□□ -0.85
PRKCH-202ENST00000536400 IRS4O14654 1257 aaPredicted RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms