RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 RSF1Q96T23 1441 aaPredicted RBP5.32□□□□□ -1.56
SNHG1-202ENST00000535689 EIF1AYO14602 144 aaKnown RBP5.32□□□□□ -1.56
SNHG1-202ENST00000535689 VSIG8P0DPA2 414 aa5.32□□□□□ -1.56
SNHG1-202ENST00000535689 XRCC5P13010 732 aaKnown RBP5.32□□□□□ -1.56
SNHG1-202ENST00000535689 HOXD8P13378 290 aaPredicted RBP5.32□□□□□ -1.56
SNHG1-202ENST00000535689 KRT76Q01546 638 aa5.32□□□□□ -1.56
SNHG1-202ENST00000535689 SFSWAPQ12872 951 aaKnown RBP5.32□□□□□ -1.56
SNHG1-202ENST00000535689 ENOX2Q16206 610 aaKnown RBP5.32□□□□□ -1.56
SNHG1-202ENST00000535689 ZNF468Q5VIY5 522 aaPredicted RBP5.32□□□□□ -1.56
SNHG1-202ENST00000535689 NCAPG2Q86XI2 1143 aa5.32□□□□□ -1.56
SNHG1-202ENST00000535689 NPAS4Q8IUM7 802 aa5.32□□□□□ -1.56
SNHG1-202ENST00000535689 OR13H1Q8NG92 308 aa5.32□□□□□ -1.56
SNHG1-202ENST00000535689 GIPC2Q8TF65 315 aa5.32□□□□□ -1.56
SNHG1-202ENST00000535689 GGNBP2Q9H3C7 697 aa5.32□□□□□ -1.56
SNHG1-202ENST00000535689 ZFYVE28Q9HCC9 887 aa5.32□□□□□ -1.56
SNHG1-202ENST00000535689 IFT140Q96RY7 1462 aa5.32□□□□□ -1.56
SNHG1-202ENST00000535689 PNMA6FA0A0J9YX94 578 aa5.31□□□□□ -1.56
SNHG1-202ENST00000535689 SORBS3O60504 671 aa5.31□□□□□ -1.56
SNHG1-202ENST00000535689 SASH3O75995 380 aa5.31□□□□□ -1.56
SNHG1-202ENST00000535689 NFKB1P19838 968 aa5.31□□□□□ -1.56
SNHG1-202ENST00000535689 SRSF11Q05519 484 aaKnown RBP5.31□□□□□ -1.56
SNHG1-202ENST00000535689 PSMD2Q13200 908 aa5.31□□□□□ -1.56
SNHG1-202ENST00000535689 RNFT1Q5M7Z0 435 aa5.31□□□□□ -1.56
SNHG1-202ENST00000535689 KANK3Q6NY19 840 aa5.31□□□□□ -1.56
SNHG1-202ENST00000535689 DHX32Q7L7V1 743 aaKnown RBP5.31□□□□□ -1.56
SNHG1-202ENST00000535689 DDX54Q8TDD1 881 aaKnown RBP5.31□□□□□ -1.56
SNHG1-202ENST00000535689 UBE2OQ9C0C9 1292 aaKnown RBP5.31□□□□□ -1.56
SNHG1-202ENST00000535689 CFTRP13569 1480 aa5.31□□□□□ -1.56
SNHG1-202ENST00000535689 GADD45BO75293 160 aaPredicted RBP5.3□□□□□ -1.56
SNHG1-202ENST00000535689 SMNDC1O75940 238 aaKnown RBP eCLIP5.3□□□□□ -1.563e-14■■■■■ 31.4
SNHG1-202ENST00000535689 CD33P20138 364 aa5.3□□□□□ -1.56
SNHG1-202ENST00000535689 VAMP1P23763 118 aa5.3□□□□□ -1.56
SNHG1-202ENST00000535689 GNA15P30679 374 aa5.3□□□□□ -1.56
SNHG1-202ENST00000535689 GPLD1P80108 840 aa5.3□□□□□ -1.56
SNHG1-202ENST00000535689 UBAP2LQ14157 1087 aaKnown RBP5.3□□□□□ -1.56
SNHG1-202ENST00000535689 GALNT12Q8IXK2 581 aa5.3□□□□□ -1.56
SNHG1-202ENST00000535689 TRPM4Q8TD43 1214 aa5.3□□□□□ -1.56
SNHG1-202ENST00000535689 TNFRSF25Q93038 417 aa5.3□□□□□ -1.56
SNHG1-202ENST00000535689 CNTNAP3BQ96NU0 1288 aa5.3□□□□□ -1.56
SNHG1-202ENST00000535689 CNTNAP3Q9BZ76 1288 aa5.3□□□□□ -1.56
SNHG1-202ENST00000535689 MUC3BQ9H195 1237 aa5.3□□□□□ -1.56
SNHG1-202ENST00000535689 MROH2BQ7Z745 1585 aa5.29□□□□□ -1.56
SNHG1-202ENST00000535689 PRDM2Q13029 1718 aa5.29□□□□□ -1.56
SNHG1-202ENST00000535689 FAM181BA6NEQ2 426 aa5.29□□□□□ -1.56
SNHG1-202ENST00000535689 ADARB2-AS1A8MUL3 147 aa5.29□□□□□ -1.56
SNHG1-202ENST00000535689 GPR25O00155 361 aa5.29□□□□□ -1.56
SNHG1-202ENST00000535689 GPR182O15218 404 aa5.29□□□□□ -1.56
SNHG1-202ENST00000535689 EIF4BP23588 611 aaKnown RBP5.29□□□□□ -1.56
SNHG1-202ENST00000535689 TARSP26639 723 aaKnown RBP5.29□□□□□ -1.56
SNHG1-202ENST00000535689 RBM25P49756 843 aaKnown RBP5.29□□□□□ -1.56
SNHG1-202ENST00000535689 MAP3K10Q02779 954 aa5.29□□□□□ -1.56
SNHG1-202ENST00000535689 KRT25Q7Z3Z0 450 aa5.29□□□□□ -1.56
SNHG1-202ENST00000535689 SYT9Q86SS6 491 aa5.29□□□□□ -1.56
SNHG1-202ENST00000535689 CCDC74AQ96AQ1 378 aa5.29□□□□□ -1.56
SNHG1-202ENST00000535689 COL25A1Q9BXS0 654 aaPredicted RBP5.29□□□□□ -1.56
SNHG1-202ENST00000535689 FRRS1LQ9P0K9 344 aa5.29□□□□□ -1.56
SNHG1-202ENST00000535689 ELOA3CA0A087WX78 387 aaPredicted RBP5.28□□□□□ -1.56
SNHG1-202ENST00000535689 LOC102724428A0A0B4J2F2 783 aa5.28□□□□□ -1.56
SNHG1-202ENST00000535689 SPDYE3A6NKU9 549 aa5.28□□□□□ -1.56
SNHG1-202ENST00000535689 ELOA3DA6NLF2 546 aaPredicted RBP5.28□□□□□ -1.56
SNHG1-202ENST00000535689 MMP20O60882 483 aa5.28□□□□□ -1.56
SNHG1-202ENST00000535689 KIF4AO95239 1232 aa5.28□□□□□ -1.56
SNHG1-202ENST00000535689 P4HBP07237 508 aaKnown RBP5.28□□□□□ -1.56
SNHG1-202ENST00000535689 RLBP1P12271 317 aa5.28□□□□□ -1.56
SNHG1-202ENST00000535689 ZNF16P17020 682 aaPredicted RBP5.28□□□□□ -1.56
SNHG1-202ENST00000535689 SIK1P57059 783 aa5.28□□□□□ -1.56
SNHG1-202ENST00000535689 CABP4P57796 275 aa5.28□□□□□ -1.56
SNHG1-202ENST00000535689 ELOA3BQ3SY89 546 aa5.28□□□□□ -1.56
SNHG1-202ENST00000535689 KIAA0319Q5VV43 1072 aa5.28□□□□□ -1.56
SNHG1-202ENST00000535689 TMC4Q7Z404 712 aa5.28□□□□□ -1.56
SNHG1-202ENST00000535689 ELOA3Q8NG57 546 aa5.28□□□□□ -1.56
SNHG1-202ENST00000535689 OXCT2Q9BYC2 517 aaPredicted RBP5.28□□□□□ -1.56
SNHG1-202ENST00000535689 TMEM63CQ9P1W3 806 aa5.28□□□□□ -1.56
SNHG1-202ENST00000535689 FAM8A1Q9UBU6 413 aa5.28□□□□□ -1.56
SNHG1-202ENST00000535689 URB2Q14146 1524 aaKnown RBP5.28□□□□□ -1.56
SNHG1-202ENST00000535689 ARAP1Q96P48 1450 aa5.27□□□□□ -1.57
SNHG1-202ENST00000535689 CHD1O14646 1710 aa5.27□□□□□ -1.57
SNHG1-202ENST00000535689 THBS1P07996 1170 aa5.27□□□□□ -1.57
SNHG1-202ENST00000535689 GSTT1P30711 240 aa5.27□□□□□ -1.57
SNHG1-202ENST00000535689 CTBSQ01459 385 aa5.27□□□□□ -1.57
SNHG1-202ENST00000535689 TRIP4Q15650 581 aaPredicted RBP5.27□□□□□ -1.57
SNHG1-202ENST00000535689 FAM26DQ5JW98 314 aa5.27□□□□□ -1.57
SNHG1-202ENST00000535689 FAM117BQ6P1L5 589 aa5.27□□□□□ -1.57
SNHG1-202ENST00000535689 ELMSAN1Q6PJG2 1045 aa5.27□□□□□ -1.57
SNHG1-202ENST00000535689 SLCO4C1Q6ZQN7 724 aa5.27□□□□□ -1.57
SNHG1-202ENST00000535689 FBXO33Q7Z6M2 555 aa5.27□□□□□ -1.57
SNHG1-202ENST00000535689 TTC9Q92623 222 aa5.27□□□□□ -1.57
SNHG1-202ENST00000535689 KLRG1Q96E93 195 aa5.27□□□□□ -1.57
SNHG1-202ENST00000535689 EHD4Q9H223 541 aa5.27□□□□□ -1.57
SNHG1-202ENST00000535689 SUV39H2Q9H5I1 410 aa5.27□□□□□ -1.57
SNHG1-202ENST00000535689 IGFLR1Q9H665 355 aa5.27□□□□□ -1.57
SNHG1-202ENST00000535689 PARP2Q9UGN5 583 aa5.27□□□□□ -1.57
SNHG1-202ENST00000535689 SALL4Q9UJQ4 1053 aa5.27□□□□□ -1.57
SNHG1-202ENST00000535689 USP20Q9Y2K6 914 aa5.27□□□□□ -1.57
SNHG1-202ENST00000535689 SAMM50Q9Y512 469 aa5.27□□□□□ -1.57
SNHG1-202ENST00000535689 AK5Q9Y6K8 562 aa5.27□□□□□ -1.57
SNHG1-202ENST00000535689 IGF1RP08069 1367 aa5.27□□□□□ -1.57
SNHG1-202ENST00000535689 RGS9O75916 674 aaPredicted RBP5.26□□□□□ -1.57
SNHG1-202ENST00000535689 IGHA2P01877 340 aa5.26□□□□□ -1.57
SNHG1-202ENST00000535689 EIF2AK2P19525 551 aaKnown RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms