RNA–Protein interactions for RNA: ENST00000535544.1

LINC00943-203, long intergenic non-protein coding RNA 943, humanhuman

TSL 2 BASIC

Gene LINC00943, Length 2,815 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00943-203ENST00000535544 IFIT1P09914 478 aaKnown RBP11.04□□□□□ -0.64
LINC00943-203ENST00000535544 CTSWP56202 376 aa11.04□□□□□ -0.64
LINC00943-203ENST00000535544 CUL4AQ13619 759 aa11.04□□□□□ -0.64
LINC00943-203ENST00000535544 RUFY2Q8WXA3 655 aa11.04□□□□□ -0.64
LINC00943-203ENST00000535544 MED23Q9ULK4 1368 aa11.04□□□□□ -0.64
LINC00943-203ENST00000535544 CAMTA2O94983 1202 aa11.04□□□□□ -0.64
LINC00943-203ENST00000535544 ZAP70P43403 619 aa11.04□□□□□ -0.64
LINC00943-203ENST00000535544 TTLL5Q6EMB2 1281 aa11.04□□□□□ -0.64
LINC00943-203ENST00000535544 IL27Q8NEV9 243 aa11.04□□□□□ -0.64
LINC00943-203ENST00000535544 IL17RAQ96F46 866 aa11.04□□□□□ -0.64
LINC00943-203ENST00000535544 THRAP3Q9Y2W1 955 aaKnown RBP11.04□□□□□ -0.64
LINC00943-203ENST00000535544 ME3Q16798 604 aa11.03□□□□□ -0.64
LINC00943-203ENST00000535544 GAS2L3Q86XJ1 694 aa11.03□□□□□ -0.64
LINC00943-203ENST00000535544 CCDC83Q8IWF9 413 aa11.03□□□□□ -0.64
LINC00943-203ENST00000535544 METTL24Q5JXM2 366 aa11.03□□□□□ -0.64
LINC00943-203ENST00000535544 KBTBD3Q8NAB2 608 aa11.03□□□□□ -0.64
LINC00943-203ENST00000535544 OSBP2Q969R2 916 aa11.03□□□□□ -0.64
LINC00943-203ENST00000535544 TPCN1Q9ULQ1 816 aa11.03□□□□□ -0.64
LINC00943-203ENST00000535544 M0R2C6 588 aa11.02□□□□□ -0.65
LINC00943-203ENST00000535544 CYP21A2P08686 494 aa11.02□□□□□ -0.65
LINC00943-203ENST00000535544 STK3Q13188 491 aa11.02□□□□□ -0.65
LINC00943-203ENST00000535544 BARGINQ6ZT62 677 aa11.02□□□□□ -0.65
LINC00943-203ENST00000535544 STOX1Q6ZVD7 989 aa11.02□□□□□ -0.65
LINC00943-203ENST00000535544 CHST3Q7LGC8 479 aa11.02□□□□□ -0.65
LINC00943-203ENST00000535544 ZSWIM6Q9HCJ5 1215 aa11.02□□□□□ -0.65
LINC00943-203ENST00000535544 CNNM1Q9NRU3 951 aa11.02□□□□□ -0.65
LINC00943-203ENST00000535544 PDRG1Q9NUG6 133 aa11.02□□□□□ -0.65
LINC00943-203ENST00000535544 NIP7Q9Y221 180 aaKnown RBP eCLIP11.02□□□□□ -0.65
LINC00943-203ENST00000535544 PRPF40AO75400 957 aaKnown RBP11.02□□□□□ -0.65
LINC00943-203ENST00000535544 MCAMP43121 646 aa11.02□□□□□ -0.65
LINC00943-203ENST00000535544 NKX2-3Q8TAU0 364 aa11.02□□□□□ -0.65
LINC00943-203ENST00000535544 PLA2G12BQ9BX93 195 aa11.02□□□□□ -0.65
LINC00943-203ENST00000535544 PANK2Q9BZ23 570 aa11.02□□□□□ -0.65
LINC00943-203ENST00000535544 SRP68Q9UHB9 627 aaKnown RBP11.02□□□□□ -0.65
LINC00943-203ENST00000535544 USP21Q9UK80 565 aa11.02□□□□□ -0.65
LINC00943-203ENST00000535544 EIF5BO60841 1220 aaKnown RBP11.01□□□□□ -0.65
LINC00943-203ENST00000535544 GORABQ5T7V8 394 aa11.01□□□□□ -0.65
LINC00943-203ENST00000535544 RIC1Q4ADV7 1423 aa11.01□□□□□ -0.65
LINC00943-203ENST00000535544 FOXP2O15409 715 aa11.01□□□□□ -0.65
LINC00943-203ENST00000535544 CIAO1O76071 339 aa11.01□□□□□ -0.65
LINC00943-203ENST00000535544 PHKA1P46020 1223 aa11.01□□□□□ -0.65
LINC00943-203ENST00000535544 MCMDC2Q4G0Z9 681 aa11.01□□□□□ -0.65
LINC00943-203ENST00000535544 VGLL2Q8N8G2 317 aa11.01□□□□□ -0.65
LINC00943-203ENST00000535544 KCNB2Q92953 911 aa11.01□□□□□ -0.65
LINC00943-203ENST00000535544 LMBRD1Q9NUN5 540 aa11.01□□□□□ -0.65
LINC00943-203ENST00000535544 RBM27Q9P2N5 1060 aaKnown RBP11.01□□□□□ -0.65
LINC00943-203ENST00000535544 DENND2AQ9ULE3 1009 aa11.01□□□□□ -0.65
LINC00943-203ENST00000535544 CDCA7Q9BWT1 371 aaPredicted RBP11□□□□□ -0.65
LINC00943-203ENST00000535544 PUS7LQ9H0K6 701 aaKnown RBP11□□□□□ -0.65
LINC00943-203ENST00000535544 LIMCH1Q9UPQ0 1083 aa11□□□□□ -0.65
LINC00943-203ENST00000535544 MYH3P11055 1940 aa11□□□□□ -0.65
LINC00943-203ENST00000535544 ANKRD18BA2A2Z9 1011 aa11□□□□□ -0.65
LINC00943-203ENST00000535544 ERVV-1B6SEH8 477 aa11□□□□□ -0.65
LINC00943-203ENST00000535544 PDE8AO60658 829 aa11□□□□□ -0.65
LINC00943-203ENST00000535544 NCLP19338 710 aaKnown RBP11□□□□□ -0.65
LINC00943-203ENST00000535544 HSPA1LP34931 641 aa11□□□□□ -0.65
LINC00943-203ENST00000535544 TOB2Q14106 344 aaPredicted RBP11□□□□□ -0.65
LINC00943-203ENST00000535544 TTC39AQ5SRH9 613 aa11□□□□□ -0.65
LINC00943-203ENST00000535544 GBP4Q96PP9 640 aa11□□□□□ -0.65
LINC00943-203ENST00000535544 IQSEC3Q9UPP2 1182 aaPredicted RBP11□□□□□ -0.65
LINC00943-203ENST00000535544 CYP46A1Q9Y6A2 500 aa11□□□□□ -0.65
LINC00943-203ENST00000535544 BRD1O95696 1058 aa10.99□□□□□ -0.65
LINC00943-203ENST00000535544 VPS72Q15906 364 aa10.99□□□□□ -0.65
LINC00943-203ENST00000535544 ATP2B3Q16720 1220 aa10.99□□□□□ -0.65
LINC00943-203ENST00000535544 GPT2Q8TD30 523 aa10.99□□□□□ -0.65
LINC00943-203ENST00000535544 CWC22Q9HCG8 908 aaKnown RBP10.99□□□□□ -0.65
LINC00943-203ENST00000535544 RTN4Q9NQC3 1192 aaKnown RBP10.99□□□□□ -0.65
LINC00943-203ENST00000535544 GPHNQ9NQX3 736 aaPredicted RBP10.99□□□□□ -0.65
LINC00943-203ENST00000535544 RPAP1Q9BWH6 1393 aaPredicted RBP10.99□□□□□ -0.65
LINC00943-203ENST00000535544 MAST3O60307 1309 aa10.99□□□□□ -0.65
LINC00943-203ENST00000535544 CDHR2Q9BYE9 1310 aa10.99□□□□□ -0.65
LINC00943-203ENST00000535544 AKAP11Q9UKA4 1901 aa10.99□□□□□ -0.65
LINC00943-203ENST00000535544 HAND2P61296 217 aa10.99□□□□□ -0.65
LINC00943-203ENST00000535544 NUCB2P80303 420 aa10.99□□□□□ -0.65
LINC00943-203ENST00000535544 BCL2L12Q9HB09 334 aa10.99□□□□□ -0.65
LINC00943-203ENST00000535544 GPR108Q9NPR9 543 aa10.99□□□□□ -0.65
LINC00943-203ENST00000535544 HSPD1P10809 573 aaKnown RBP10.99□□□□□ -0.65
LINC00943-203ENST00000535544 ZKSCAN1P17029 563 aaPredicted RBP10.99□□□□□ -0.65
LINC00943-203ENST00000535544 ERFEQ4G0M1 354 aa10.99□□□□□ -0.65
LINC00943-203ENST00000535544 FNBP4Q8N3X1 1017 aaPredicted RBP10.99□□□□□ -0.65
LINC00943-203ENST00000535544 DDX49Q9Y6V7 483 aaKnown RBP10.99□□□□□ -0.65
LINC00943-203ENST00000535544 DDX11L8A8MPP1 907 aa10.98□□□□□ -0.65
LINC00943-203ENST00000535544 HIP1O00291 1037 aa10.98□□□□□ -0.65
LINC00943-203ENST00000535544 GADD45BO75293 160 aaPredicted RBP10.98□□□□□ -0.65
LINC00943-203ENST00000535544 NTSR2O95665 410 aa10.98□□□□□ -0.65
LINC00943-203ENST00000535544 XRCC6P12956 609 aaKnown RBP eCLIP10.98□□□□□ -0.65
LINC00943-203ENST00000535544 SYT1P21579 422 aa10.98□□□□□ -0.65
LINC00943-203ENST00000535544 CCDC158Q5M9N0 1113 aa10.98□□□□□ -0.65
LINC00943-203ENST00000535544 ZMYM1Q5SVZ6 1142 aa10.98□□□□□ -0.65
LINC00943-203ENST00000535544 FAM173BQ6P4H8 233 aa10.98□□□□□ -0.65
LINC00943-203ENST00000535544 ANKRD36CQ5JPF3 1778 aa10.98□□□□□ -0.65
LINC00943-203ENST00000535544 PDE8BO95263 885 aa10.98□□□□□ -0.65
LINC00943-203ENST00000535544 MCM2P49736 904 aa10.98□□□□□ -0.65
LINC00943-203ENST00000535544 WASHC4Q2M389 1173 aa10.98□□□□□ -0.65
LINC00943-203ENST00000535544 USPL1Q5W0Q7 1092 aa10.98□□□□□ -0.65
LINC00943-203ENST00000535544 TBC1D9BQ66K14 1250 aa10.98□□□□□ -0.65
LINC00943-203ENST00000535544 UTP14AQ9BVJ6 771 aaKnown RBP10.98□□□□□ -0.65
LINC00943-203ENST00000535544 PIH1D3Q9NQM4 214 aaKnown RBP10.98□□□□□ -0.65
LINC00943-203ENST00000535544 INCENPQ9NQS7 918 aa10.98□□□□□ -0.65
LINC00943-203ENST00000535544 SH3TC1Q8TE82 1336 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms