RNA–Protein interactions for RNA: ENST00000535479.5

LPCAT3-203, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 2,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-203ENST00000535479 GOLGA6L19H0YKK7 550 aa16.37■□□□□ 0.21
LPCAT3-203ENST00000535479 HMGN5P82970 282 aaKnown RBP16.37■□□□□ 0.21
LPCAT3-203ENST00000535479 FAM177A1Q8N128 213 aaPredicted RBP16.37■□□□□ 0.21
LPCAT3-203ENST00000535479 MAP7D2Q96T17 732 aa16.37■□□□□ 0.21
LPCAT3-203ENST00000535479 PLEKHG1Q9ULL1 1385 aa16.37■□□□□ 0.21
LPCAT3-203ENST00000535479 DIP2AQ14689 1571 aa16.37■□□□□ 0.21
LPCAT3-203ENST00000535479 PTPDC1A2A3K4 754 aa16.37■□□□□ 0.21
LPCAT3-203ENST00000535479 BECN2A8MW95 431 aa16.37■□□□□ 0.21
LPCAT3-203ENST00000535479 UBE2Q2LH0YL09 131 aa16.37■□□□□ 0.21
LPCAT3-203ENST00000535479 CTDNEP1O95476 244 aa16.37■□□□□ 0.21
LPCAT3-203ENST00000535479 GCKRQ14397 625 aa16.37■□□□□ 0.21
LPCAT3-203ENST00000535479 LRRC24Q50LG9 513 aa16.37■□□□□ 0.21
LPCAT3-203ENST00000535479 TNNI3KQ59H18 835 aa16.37■□□□□ 0.21
LPCAT3-203ENST00000535479 RNF20Q5VTR2 975 aa16.37■□□□□ 0.21
LPCAT3-203ENST00000535479 PUS3Q9BZE2 481 aaKnown RBP16.37■□□□□ 0.21
LPCAT3-203ENST00000535479 CLSTN2Q9H4D0 955 aa16.37■□□□□ 0.21
LPCAT3-203ENST00000535479 FPGT-TNNI3KV9GXZ4 949 aa16.37■□□□□ 0.21
LPCAT3-203ENST00000535479 ZNF609O15014 1411 aa16.37■□□□□ 0.21
LPCAT3-203ENST00000535479 RESTQ13127 1097 aa16.36■□□□□ 0.21
LPCAT3-203ENST00000535479 NKX2-3Q8TAU0 364 aa16.36■□□□□ 0.21
LPCAT3-203ENST00000535479 GTF3C6Q969F1 213 aa16.36■□□□□ 0.21
LPCAT3-203ENST00000535479 AIFM3Q96NN9 605 aa16.36■□□□□ 0.21
LPCAT3-203ENST00000535479 GOLGA6L6A8MZA4 724 aa16.36■□□□□ 0.21
LPCAT3-203ENST00000535479 ZBTB22O15209 634 aa16.35■□□□□ 0.21
LPCAT3-203ENST00000535479 PTPN12Q05209 780 aaKnown RBP16.35■□□□□ 0.21
LPCAT3-203ENST00000535479 NEXNQ0ZGT2 675 aa16.35■□□□□ 0.21
LPCAT3-203ENST00000535479 FSIP1Q8NA03 581 aa16.35■□□□□ 0.21
LPCAT3-203ENST00000535479 MARCKSP29966 332 aaPredicted RBP16.35■□□□□ 0.21
LPCAT3-203ENST00000535479 ZNF790Q6PG37 636 aa16.35■□□□□ 0.21
LPCAT3-203ENST00000535479 INCENPQ9NQS7 918 aa16.35■□□□□ 0.21
LPCAT3-203ENST00000535479 ERC1Q8IUD2 1116 aa16.34■□□□□ 0.21
LPCAT3-203ENST00000535479 TM6SF1Q9BZW5 370 aa16.34■□□□□ 0.21
LPCAT3-203ENST00000535479 ZNF215Q9UL58 517 aaPredicted RBP16.34■□□□□ 0.21
LPCAT3-203ENST00000535479 SKILP12757 684 aa16.34■□□□□ 0.21
LPCAT3-203ENST00000535479 ANKRD13DQ6ZTN6 518 aa16.34■□□□□ 0.21
LPCAT3-203ENST00000535479 SYNE4Q8N205 404 aa16.34■□□□□ 0.21
LPCAT3-203ENST00000535479 SCAND2PQ9GZW5 306 aaPredicted RBP16.34■□□□□ 0.21
LPCAT3-203ENST00000535479 TBX22Q9Y458 520 aa16.34■□□□□ 0.21
LPCAT3-203ENST00000535479 SMC2O95347 1197 aa16.33■□□□□ 0.21
LPCAT3-203ENST00000535479 TTLL7Q6ZT98 887 aa16.33■□□□□ 0.21
LPCAT3-203ENST00000535479 TRERF1Q96PN7 1200 aa16.33■□□□□ 0.21
LPCAT3-203ENST00000535479 SDF4Q9BRK5 362 aa16.33■□□□□ 0.21
LPCAT3-203ENST00000535479 EPC1Q9H2F5 836 aa16.33■□□□□ 0.21
LPCAT3-203ENST00000535479 NPHP3Q7Z494 1330 aa16.33■□□□□ 0.2
LPCAT3-203ENST00000535479 SPECC1Q5M775 1068 aa16.33■□□□□ 0.2
LPCAT3-203ENST00000535479 DDX21Q9NR30 783 aaKnown RBP eCLIP16.33■□□□□ 0.2
LPCAT3-203ENST00000535479 CLIC4Q9Y696 253 aa16.33■□□□□ 0.2
LPCAT3-203ENST00000535479 ERICH4A6NGS2 130 aa16.32■□□□□ 0.2
LPCAT3-203ENST00000535479 CCDC69A6NI79 296 aa16.32■□□□□ 0.2
LPCAT3-203ENST00000535479 MTX1Q13505 466 aa16.32■□□□□ 0.2
LPCAT3-203ENST00000535479 WASHC4Q2M389 1173 aa16.32■□□□□ 0.2
LPCAT3-203ENST00000535479 IL17RAQ96F46 866 aa16.32■□□□□ 0.2
LPCAT3-203ENST00000535479 ALDH1L1O75891 902 aa16.32■□□□□ 0.2
LPCAT3-203ENST00000535479 DDX58O95786 925 aaKnown RBP16.32■□□□□ 0.2
LPCAT3-203ENST00000535479 PDCP20941 246 aa16.32■□□□□ 0.2
LPCAT3-203ENST00000535479 ELF2Q15723 593 aa16.32■□□□□ 0.2
LPCAT3-203ENST00000535479 PLA2G4DQ86XP0 818 aa16.32■□□□□ 0.2
LPCAT3-203ENST00000535479 CCDC82Q8N4S0 544 aa16.32■□□□□ 0.2
LPCAT3-203ENST00000535479 NSUN7Q8NE18 718 aaKnown RBP16.32■□□□□ 0.2
LPCAT3-203ENST00000535479 CCDC112Q8NEF3 446 aa16.32■□□□□ 0.2
LPCAT3-203ENST00000535479 USP42Q9H9J4 1324 aaKnown RBP16.32■□□□□ 0.2
LPCAT3-203ENST00000535479 DPCR1Q3MIW9 517 aa16.32■□□□□ 0.2
LPCAT3-203ENST00000535479 CEP135Q66GS9 1140 aa16.32■□□□□ 0.2
LPCAT3-203ENST00000535479 ILDR1Q86SU0 546 aaPredicted RBP16.32■□□□□ 0.2
LPCAT3-203ENST00000535479 CHMP4CQ96CF2 233 aa16.32■□□□□ 0.2
LPCAT3-203ENST00000535479 UBR1Q8IWV7 1749 aa16.32■□□□□ 0.2
LPCAT3-203ENST00000535479 NALCNQ8IZF0 1738 aa16.31■□□□□ 0.2
LPCAT3-203ENST00000535479 A1BGP04217 495 aa16.31■□□□□ 0.2
LPCAT3-203ENST00000535479 ZNF771Q7L3S4 317 aaPredicted RBP16.31■□□□□ 0.2
LPCAT3-203ENST00000535479 LMOD1P29536 600 aaPredicted RBP16.31■□□□□ 0.2
LPCAT3-203ENST00000535479 ADORA1P30542 326 aa16.31■□□□□ 0.2
LPCAT3-203ENST00000535479 NDUFA8P51970 172 aa16.31■□□□□ 0.2
LPCAT3-203ENST00000535479 SMAP1Q8IYB5 467 aaPredicted RBP16.31■□□□□ 0.2
LPCAT3-203ENST00000535479 MED23Q9ULK4 1368 aa16.31■□□□□ 0.2
LPCAT3-203ENST00000535479 M0R2C6 588 aa16.3■□□□□ 0.2
LPCAT3-203ENST00000535479 ADD1P35611 737 aaKnown RBP16.3■□□□□ 0.2
LPCAT3-203ENST00000535479 THEMISQ8N1K5 641 aaPredicted RBP16.3■□□□□ 0.2
LPCAT3-203ENST00000535479 MYL10Q9BUA6 226 aa16.3■□□□□ 0.2
LPCAT3-203ENST00000535479 IQCB1Q15051 598 aa16.3■□□□□ 0.2
LPCAT3-203ENST00000535479 SF3A1Q15459 793 aaKnown RBP16.3■□□□□ 0.2
LPCAT3-203ENST00000535479 LRRC8AQ8IWT6 810 aa16.3■□□□□ 0.2
LPCAT3-203ENST00000535479 KINO60870 393 aaKnown RBP16.29■□□□□ 0.2
LPCAT3-203ENST00000535479 DMTNQ08495 405 aa16.29■□□□□ 0.2
LPCAT3-203ENST00000535479 MCMDC2Q4G0Z9 681 aa16.29■□□□□ 0.2
LPCAT3-203ENST00000535479 CCDC73Q6ZRK6 1079 aa16.29■□□□□ 0.2
LPCAT3-203ENST00000535479 TMC6Q7Z403 805 aa16.29■□□□□ 0.2
LPCAT3-203ENST00000535479 RAPGEF4Q8WZA2 1011 aa16.29■□□□□ 0.2
LPCAT3-203ENST00000535479 DDX19AQ9NUU7 478 aaKnown RBP16.29■□□□□ 0.2
LPCAT3-203ENST00000535479 SNW1Q13573 536 aaKnown RBP16.29■□□□□ 0.2
LPCAT3-203ENST00000535479 TOPAZ1Q8N9V7 1692 aa16.29■□□□□ 0.2
LPCAT3-203ENST00000535479 ATP1A3P13637 1013 aa16.29■□□□□ 0.2
LPCAT3-203ENST00000535479 ATP2B1P20020 1258 aa16.29■□□□□ 0.2
LPCAT3-203ENST00000535479 GTF2F1P35269 517 aaKnown RBP eCLIP16.29■□□□□ 0.2
LPCAT3-203ENST00000535479 SCARF1Q14162 830 aa16.29■□□□□ 0.2
LPCAT3-203ENST00000535479 DHX40Q8IX18 779 aaKnown RBP16.29■□□□□ 0.2
LPCAT3-203ENST00000535479 TTC5Q8N0Z6 440 aa16.29■□□□□ 0.2
LPCAT3-203ENST00000535479 KCNB2Q92953 911 aa16.29■□□□□ 0.2
LPCAT3-203ENST00000535479 PCDHA7Q9UN72 937 aa16.29■□□□□ 0.2
LPCAT3-203ENST00000535479 E7EWF7 191 aa16.28■□□□□ 0.2
LPCAT3-203ENST00000535479 SNAP23O00161 211 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms