RNA–Protein interactions for RNA: ENST00000535237.2

GOPC-203, Transcript of golgi associated PDZ and coiled-coil motif containing, humanhuman

TSL 1 (best) BASIC

Gene GOPC, Length 4,460 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GOPC-203ENST00000535237 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.15■□□□□ 0.34
GOPC-203ENST00000535237 TNRQ92752 1358 aa17.15■□□□□ 0.34
GOPC-203ENST00000535237 PTCD1O75127 700 aaKnown RBP17.15■□□□□ 0.34
GOPC-203ENST00000535237 CTCFLQ8NI51 663 aaPredicted RBP17.15■□□□□ 0.34
GOPC-203ENST00000535237 PPP1R1BQ9UD71 204 aaPredicted RBP17.15■□□□□ 0.34
GOPC-203ENST00000535237 TMCO5BA8MYB1 307 aa17.15■□□□□ 0.34
GOPC-203ENST00000535237 MYO1BO43795 1136 aa17.15■□□□□ 0.34
GOPC-203ENST00000535237 CEP57Q86XR8 500 aa17.15■□□□□ 0.34
GOPC-203ENST00000535237 OTUD6BQ8N6M0 293 aa17.15■□□□□ 0.34
GOPC-203ENST00000535237 GPATCH8Q9UKJ3 1502 aaKnown RBP17.15■□□□□ 0.34
GOPC-203ENST00000535237 THOC2Q8NI27 1593 aaKnown RBP17.14■□□□□ 0.34
GOPC-203ENST00000535237 RANBP6O60518 1105 aaKnown RBP17.14■□□□□ 0.33
GOPC-203ENST00000535237 CHST3Q7LGC8 479 aa17.14■□□□□ 0.33
GOPC-203ENST00000535237 CADPS2Q86UW7 1296 aa17.14■□□□□ 0.33
GOPC-203ENST00000535237 UGGT2Q9NYU1 1516 aa17.14■□□□□ 0.33
GOPC-203ENST00000535237 ATP5J2-PTCD1G3V325 749 aa17.14■□□□□ 0.33
GOPC-203ENST00000535237 HSPA4P34932 840 aa17.14■□□□□ 0.33
GOPC-203ENST00000535237 ZC3H6P61129 1189 aaKnown RBP17.14■□□□□ 0.33
GOPC-203ENST00000535237 PTPDC1A2A3K4 754 aa17.14■□□□□ 0.33
GOPC-203ENST00000535237 ZEB2O60315 1214 aa17.14■□□□□ 0.33
GOPC-203ENST00000535237 HDXQ7Z353 690 aa17.13■□□□□ 0.33
GOPC-203ENST00000535237 ZNF215Q9UL58 517 aaPredicted RBP17.13■□□□□ 0.33
GOPC-203ENST00000535237 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.13■□□□□ 0.33
GOPC-203ENST00000535237 STX17P56962 302 aa17.13■□□□□ 0.33
GOPC-203ENST00000535237 FAM160A1Q05DH4 1040 aa17.13■□□□□ 0.33
GOPC-203ENST00000535237 BLMP54132 1417 aaPredicted RBP17.13■□□□□ 0.33
GOPC-203ENST00000535237 FAM135AQ9P2D6 1515 aa17.13■□□□□ 0.33
GOPC-203ENST00000535237 APOBRQ0VD83 1088 aa17.13■□□□□ 0.33
GOPC-203ENST00000535237 CAPZA3Q96KX2 299 aa17.13■□□□□ 0.33
GOPC-203ENST00000535237 CTAGE1Q96RT6 745 aa17.13■□□□□ 0.33
GOPC-203ENST00000535237 BAG1Q99933 345 aaPredicted RBP17.13■□□□□ 0.33
GOPC-203ENST00000535237 CLSTN2Q9H4D0 955 aa17.13■□□□□ 0.33
GOPC-203ENST00000535237 GUCA1BQ9UMX6 200 aa17.13■□□□□ 0.33
GOPC-203ENST00000535237 SOS1Q07889 1333 aaPredicted RBP17.13■□□□□ 0.33
GOPC-203ENST00000535237 UBA7P41226 1012 aa17.13■□□□□ 0.33
GOPC-203ENST00000535237 NLRP5P59047 1200 aa17.13■□□□□ 0.33
GOPC-203ENST00000535237 MCMDC2Q4G0Z9 681 aa17.13■□□□□ 0.33
GOPC-203ENST00000535237 RRAGBQ5VZM2 374 aa17.13■□□□□ 0.33
GOPC-203ENST00000535237 TRIM47Q96LD4 638 aa17.13■□□□□ 0.33
GOPC-203ENST00000535237 A0A1B0GUL7 405 aa17.12■□□□□ 0.33
GOPC-203ENST00000535237 IDEP14735 1019 aa17.12■□□□□ 0.33
GOPC-203ENST00000535237 CYLC1P35663 651 aaPredicted RBP17.12■□□□□ 0.33
GOPC-203ENST00000535237 NOP2P46087 812 aaKnown RBP17.12■□□□□ 0.33
GOPC-203ENST00000535237 SMC1AQ14683 1233 aaKnown RBP17.12■□□□□ 0.33
GOPC-203ENST00000535237 CHPF2Q9P2E5 772 aa17.12■□□□□ 0.33
GOPC-203ENST00000535237 NUP160Q12769 1436 aa17.12■□□□□ 0.33
GOPC-203ENST00000535237 DMTNQ08495 405 aa17.12■□□□□ 0.33
GOPC-203ENST00000535237 CCDC96Q2M329 555 aa17.12■□□□□ 0.33
GOPC-203ENST00000535237 SNX14Q9Y5W7 946 aa17.12■□□□□ 0.33
GOPC-203ENST00000535237 CD2BP2O95400 341 aaKnown RBP17.12■□□□□ 0.33
GOPC-203ENST00000535237 MYL5Q02045 173 aa17.12■□□□□ 0.33
GOPC-203ENST00000535237 VPS36Q86VN1 386 aa17.12■□□□□ 0.33
GOPC-203ENST00000535237 IQCA1Q86XH1 822 aa17.12■□□□□ 0.33
GOPC-203ENST00000535237 KIF14Q15058 1648 aa17.12■□□□□ 0.33
GOPC-203ENST00000535237 CCDC194A0A1B0GVG4 234 aa17.11■□□□□ 0.33
GOPC-203ENST00000535237 OPA1O60313 960 aa17.11■□□□□ 0.33
GOPC-203ENST00000535237 SPAG1Q07617 926 aa17.11■□□□□ 0.33
GOPC-203ENST00000535237 TTC41PQ6P2S7 1318 aa17.11■□□□□ 0.33
GOPC-203ENST00000535237 USP5P45974 858 aa17.11■□□□□ 0.33
GOPC-203ENST00000535237 MAP3K12Q12852 859 aa17.11■□□□□ 0.33
GOPC-203ENST00000535237 ERCC6LQ2NKX8 1250 aa17.11■□□□□ 0.33
GOPC-203ENST00000535237 LEO1Q8WVC0 666 aaPredicted RBP17.11■□□□□ 0.33
GOPC-203ENST00000535237 TRIM35Q9UPQ4 493 aa17.11■□□□□ 0.33
GOPC-203ENST00000535237 GSPT1P15170 499 aaKnown RBP17.11■□□□□ 0.33
GOPC-203ENST00000535237 IFIT5Q13325 482 aaKnown RBP17.11■□□□□ 0.33
GOPC-203ENST00000535237 PRPF4BQ13523 1007 aaKnown RBP17.11■□□□□ 0.33
GOPC-203ENST00000535237 PLCH2O75038 1416 aa17.11■□□□□ 0.33
GOPC-203ENST00000535237 ERBB4Q15303 1308 aa17.11■□□□□ 0.33
GOPC-203ENST00000535237 COL17A1Q9UMD9 1497 aaPredicted RBP17.1■□□□□ 0.33
GOPC-203ENST00000535237 GSTTP1A0A1W2PQM5 241 aa17.1■□□□□ 0.33
GOPC-203ENST00000535237 ABCC2Q92887 1545 aa17.1■□□□□ 0.33
GOPC-203ENST00000535237 TTC21BQ7Z4L5 1316 aa17.1■□□□□ 0.33
GOPC-203ENST00000535237 WDHD1O75717 1129 aaPredicted RBP17.1■□□□□ 0.33
GOPC-203ENST00000535237 FGFR1OPO95684 399 aaKnown RBP17.1■□□□□ 0.33
GOPC-203ENST00000535237 TUBBP07437 444 aa17.1■□□□□ 0.33
GOPC-203ENST00000535237 TUBB4BP68371 445 aa17.1■□□□□ 0.33
GOPC-203ENST00000535237 TSG101Q99816 390 aa17.1■□□□□ 0.33
GOPC-203ENST00000535237 ZBTB43O43298 467 aa17.1■□□□□ 0.33
GOPC-203ENST00000535237 SPECC1LQ69YQ0 1117 aa17.1■□□□□ 0.33
GOPC-203ENST00000535237 G2E3Q7L622 706 aa17.09■□□□□ 0.33
GOPC-203ENST00000535237 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.09■□□□□ 0.337e-8■■■■■ 186.3
GOPC-203ENST00000535237 PYCARDQ9ULZ3 195 aa17.09■□□□□ 0.33
GOPC-203ENST00000535237 INSRP06213 1382 aa17.09■□□□□ 0.33
GOPC-203ENST00000535237 SGSM2O43147 1006 aa17.09■□□□□ 0.33
GOPC-203ENST00000535237 OAS2P29728 719 aaKnown RBP17.09■□□□□ 0.33
GOPC-203ENST00000535237 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.09■□□□□ 0.33
GOPC-203ENST00000535237 AMOTQ4VCS5 1084 aa17.08■□□□□ 0.33
GOPC-203ENST00000535237 DHX58Q96C10 678 aa17.08■□□□□ 0.33
GOPC-203ENST00000535237 RNF41Q9H4P4 317 aaPredicted RBP17.08■□□□□ 0.33
GOPC-203ENST00000535237 ZRANB1Q9UGI0 708 aa17.08■□□□□ 0.33
GOPC-203ENST00000535237 GCOM1H8Y6P7 765 aaPredicted RBP17.08■□□□□ 0.32
GOPC-203ENST00000535237 KRT86O43790 486 aa17.08■□□□□ 0.32
GOPC-203ENST00000535237 MYZAPP0CAP1 466 aa17.08■□□□□ 0.32
GOPC-203ENST00000535237 DHX32Q7L7V1 743 aaKnown RBP17.08■□□□□ 0.32
GOPC-203ENST00000535237 MSH6P52701 1360 aa17.08■□□□□ 0.32
GOPC-203ENST00000535237 SSR1P43307 286 aaKnown RBP17.08■□□□□ 0.32
GOPC-203ENST00000535237 ZSCAN26Q16670 478 aa17.08■□□□□ 0.32
GOPC-203ENST00000535237 FAM76AQ8TAV0 307 aa17.08■□□□□ 0.32
GOPC-203ENST00000535237 EZRP15311 586 aaKnown RBP17.08■□□□□ 0.32
GOPC-203ENST00000535237 CHMP4BP1P59074 171 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms