RNA–Protein interactions for RNA: ENST00000535180.5

VAMP1-204, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3 BASIC

Gene VAMP1, Length 747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-204ENST00000535180 PRO3102Q9H379 93 aa14.37□□□□□ -0.11
VAMP1-204ENST00000535180 RIMBP2O15034 1052 aa14.36□□□□□ -0.11
VAMP1-204ENST00000535180 INHBEP58166 350 aa14.36□□□□□ -0.11
VAMP1-204ENST00000535180 IFNL1Q8IU54 200 aa14.36□□□□□ -0.11
VAMP1-204ENST00000535180 CD99L2Q8TCZ2 262 aa14.36□□□□□ -0.11
VAMP1-204ENST00000535180 NECTIN2Q92692 538 aa14.36□□□□□ -0.11
VAMP1-204ENST00000535180 UTP14AQ9BVJ6 771 aaKnown RBP14.36□□□□□ -0.11
VAMP1-204ENST00000535180 EFCC1Q9HA90 598 aa14.36□□□□□ -0.11
VAMP1-204ENST00000535180 KNSTRNQ9Y448 316 aa14.36□□□□□ -0.11
VAMP1-204ENST00000535180 UNC80Q8N2C7 3258 aa14.36□□□□□ -0.11
VAMP1-204ENST00000535180 DOK7Q18PE1 504 aa14.35□□□□□ -0.11
VAMP1-204ENST00000535180 SPRYD7Q5W111 196 aa14.35□□□□□ -0.11
VAMP1-204ENST00000535180 NBPF11Q86T75 865 aa14.35□□□□□ -0.11
VAMP1-204ENST00000535180 NSFL1CQ9UNZ2 370 aaKnown RBP14.35□□□□□ -0.11
VAMP1-204ENST00000535180 MANSC4A6NHS7 340 aaPredicted RBP14.34□□□□□ -0.11
VAMP1-204ENST00000535180 PTPN12Q05209 780 aaKnown RBP14.34□□□□□ -0.11
VAMP1-204ENST00000535180 SLC4A8Q2Y0W8 1093 aa14.34□□□□□ -0.11
VAMP1-204ENST00000535180 PRAMEF18Q5VWM3 479 aa14.34□□□□□ -0.11
VAMP1-204ENST00000535180 AGBL3Q8NEM8 1001 aa14.34□□□□□ -0.11
VAMP1-204ENST00000535180 POLLQ9UGP5 575 aa14.34□□□□□ -0.11
VAMP1-204ENST00000535180 SCAF8Q9UPN6 1271 aaKnown RBP14.34□□□□□ -0.11
VAMP1-204ENST00000535180 RRP7AQ9Y3A4 280 aaKnown RBP14.34□□□□□ -0.11
VAMP1-204ENST00000535180 C6orf229H3BNL8 230 aa14.33□□□□□ -0.12
VAMP1-204ENST00000535180 NF2P35240 595 aa14.33□□□□□ -0.12
VAMP1-204ENST00000535180 DPF3Q92784 378 aa14.33□□□□□ -0.12
VAMP1-204ENST00000535180 PHACTR3Q96KR7 559 aa14.33□□□□□ -0.12
VAMP1-204ENST00000535180 EYA3Q99504 573 aa14.33□□□□□ -0.12
VAMP1-204ENST00000535180 COL25A1Q9BXS0 654 aaPredicted RBP14.33□□□□□ -0.12
VAMP1-204ENST00000535180 MYOZ2Q9NPC6 264 aa14.33□□□□□ -0.12
VAMP1-204ENST00000535180 LAMA3Q16787 3333 aa14.33□□□□□ -0.12
VAMP1-204ENST00000535180 ZNF646O15015 1829 aaPredicted RBP14.33□□□□□ -0.12
VAMP1-204ENST00000535180 A0A1W2PPC1 479 aa14.32□□□□□ -0.12
VAMP1-204ENST00000535180 U2SURPO15042 1029 aaKnown RBP14.32□□□□□ -0.12
VAMP1-204ENST00000535180 MYL6BP14649 208 aa14.32□□□□□ -0.12
VAMP1-204ENST00000535180 SLC9C1Q4G0N8 1177 aa14.32□□□□□ -0.12
VAMP1-204ENST00000535180 COL3A1P02461 1466 aaPredicted RBP14.31□□□□□ -0.12
VAMP1-204ENST00000535180 IGF2BP3O00425 579 aaKnown RBP eCLIP14.31□□□□□ -0.12
VAMP1-204ENST00000535180 SOX1O00570 391 aaPredicted RBP14.31□□□□□ -0.12
VAMP1-204ENST00000535180 HCLS1P14317 486 aaPredicted RBP14.31□□□□□ -0.12
VAMP1-204ENST00000535180 CAP1Q01518 475 aa14.31□□□□□ -0.12
VAMP1-204ENST00000535180 SP3Q02447 781 aa14.31□□□□□ -0.12
VAMP1-204ENST00000535180 AMER1Q5JTC6 1135 aaPredicted RBP14.31□□□□□ -0.12
VAMP1-204ENST00000535180 LDLRAD1Q5T700 205 aa14.31□□□□□ -0.12
VAMP1-204ENST00000535180 MCM10Q7L590 875 aa14.31□□□□□ -0.12
VAMP1-204ENST00000535180 ARMC9Q7Z3E5 817 aa14.31□□□□□ -0.12
VAMP1-204ENST00000535180 WTIPA6NIX2 430 aaPredicted RBP14.3□□□□□ -0.12
VAMP1-204ENST00000535180 USP17L8P0C7I0 530 aa14.3□□□□□ -0.12
VAMP1-204ENST00000535180 GPSM2P81274 684 aa14.3□□□□□ -0.12
VAMP1-204ENST00000535180 RSBN1LQ6PCB5 846 aaPredicted RBP14.3□□□□□ -0.12
VAMP1-204ENST00000535180 RTF1Q92541 710 aaKnown RBP14.3□□□□□ -0.12
VAMP1-204ENST00000535180 GMLQ99445 158 aa14.3□□□□□ -0.12
VAMP1-204ENST00000535180 ZBTB48P10074 688 aaPredicted RBP14.29□□□□□ -0.12
VAMP1-204ENST00000535180 CRHR2Q13324 411 aa14.29□□□□□ -0.12
VAMP1-204ENST00000535180 TBC1D16Q8TBP0 767 aa14.29□□□□□ -0.12
VAMP1-204ENST00000535180 LRCH3Q96II8 777 aa14.29□□□□□ -0.12
VAMP1-204ENST00000535180 ZC3H12CQ9C0D7 883 aaKnown RBP14.29□□□□□ -0.12
VAMP1-204ENST00000535180 PTCH2Q9Y6C5 1203 aa14.29□□□□□ -0.12
VAMP1-204ENST00000535180 TAF7Q15545 349 aaPredicted RBP14.28□□□□□ -0.12
VAMP1-204ENST00000535180 NBPF9Q3BBW0 867 aa14.28□□□□□ -0.12
VAMP1-204ENST00000535180 OTUD7BQ6GQQ9 843 aa14.28□□□□□ -0.12
VAMP1-204ENST00000535180 G3V3G9 751 aa14.27□□□□□ -0.13
VAMP1-204ENST00000535180 PRKAR2BP31323 418 aa14.27□□□□□ -0.13
VAMP1-204ENST00000535180 PRKG1Q13976 671 aa14.27□□□□□ -0.13
VAMP1-204ENST00000535180 ARHGEF6Q15052 776 aa14.27□□□□□ -0.13
VAMP1-204ENST00000535180 DCAF8Q5TAQ9 597 aa14.27□□□□□ -0.13
VAMP1-204ENST00000535180 GPR153Q6NV75 609 aa14.27□□□□□ -0.13
VAMP1-204ENST00000535180 ANKRD13DQ6ZTN6 518 aa14.27□□□□□ -0.13
VAMP1-204ENST00000535180 CELF1Q92879 486 aaKnown RBP14.27□□□□□ -0.13
VAMP1-204ENST00000535180 SLC10A4Q96EP9 437 aa14.27□□□□□ -0.13
VAMP1-204ENST00000535180 MIS18AQ9NYP9 233 aa14.27□□□□□ -0.13
VAMP1-204ENST00000535180 ANGEL1Q9UNK9 670 aaKnown RBP14.27□□□□□ -0.13
VAMP1-204ENST00000535180 SH3TC1Q8TE82 1336 aa14.26□□□□□ -0.13
VAMP1-204ENST00000535180 DLG5Q8TDM6 1919 aa14.26□□□□□ -0.13
VAMP1-204ENST00000535180 MYCP01106 439 aaPredicted RBP14.26□□□□□ -0.13
VAMP1-204ENST00000535180 DCTN1Q14203 1278 aa14.26□□□□□ -0.13
VAMP1-204ENST00000535180 STXBP5LQ9Y2K9 1186 aa14.26□□□□□ -0.13
VAMP1-204ENST00000535180 NR2E3Q9Y5X4 410 aa14.26□□□□□ -0.13
VAMP1-204ENST00000535180 COL4A1P02462 1669 aa14.26□□□□□ -0.13
VAMP1-204ENST00000535180 ERBB4Q15303 1308 aa14.25□□□□□ -0.13
VAMP1-204ENST00000535180 NLRP10Q86W26 655 aa14.25□□□□□ -0.13
VAMP1-204ENST00000535180 WNK4Q96J92 1243 aa14.25□□□□□ -0.13
VAMP1-204ENST00000535180 HTATIP2Q9BUP3 242 aa14.25□□□□□ -0.13
VAMP1-204ENST00000535180 RSPH6AQ9H0K4 717 aa14.25□□□□□ -0.13
VAMP1-204ENST00000535180 TRMT112Q9UI30 125 aaKnown RBP14.25□□□□□ -0.13
VAMP1-204ENST00000535180 WNT10BO00744 389 aa14.24□□□□□ -0.13
VAMP1-204ENST00000535180 ZBTB7BO15156 539 aaPredicted RBP14.24□□□□□ -0.13
VAMP1-204ENST00000535180 HTATSF1O43719 755 aaKnown RBP14.24□□□□□ -0.13
VAMP1-204ENST00000535180 SHISA4Q96DD7 197 aa14.24□□□□□ -0.13
VAMP1-204ENST00000535180 PODXL2Q9NZ53 605 aa14.24□□□□□ -0.13
VAMP1-204ENST00000535180 ZSWIM8A7E2V4 1837 aa14.24□□□□□ -0.13
VAMP1-204ENST00000535180 MAP3K11Q16584 847 aa14.23□□□□□ -0.13
VAMP1-204ENST00000535180 HSP90AB3PQ58FF7 597 aa14.23□□□□□ -0.13
VAMP1-204ENST00000535180 DEFB123Q8N688 67 aa14.23□□□□□ -0.13
VAMP1-204ENST00000535180 SH3TC2Q8TF17 1288 aa14.23□□□□□ -0.13
VAMP1-204ENST00000535180 ECM29Q5VYK3 1845 aa14.22□□□□□ -0.13
VAMP1-204ENST00000535180 UNCXA6NJT0 531 aa14.22□□□□□ -0.13
VAMP1-204ENST00000535180 EIF4A1P60842 406 aaKnown RBP14.22□□□□□ -0.13
VAMP1-204ENST00000535180 SF3B3Q15393 1217 aaKnown RBP14.22□□□□□ -0.13
VAMP1-204ENST00000535180 LRP10Q7Z4F1 713 aa14.22□□□□□ -0.13
VAMP1-204ENST00000535180 UBE2Q1Q7Z7E8 422 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms