RNA–Protein interactions for RNA: ENST00000534754.5

SORL1-213, Transcript of sortilin related receptor 1, humanhuman

TSL 3

Gene SORL1, Length 2,222 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-213ENST00000534754 RAD50Q92878 1312 aa10.58□□□□□ -0.72
SORL1-213ENST00000534754 CNTNAP4Q9C0A0 1308 aa10.58□□□□□ -0.72
SORL1-213ENST00000534754 PNMA6EA0A0J9YXQ4 647 aa10.58□□□□□ -0.72
SORL1-213ENST00000534754 SPDYE4A6NLX3 237 aa10.58□□□□□ -0.72
SORL1-213ENST00000534754 ANXA1P04083 346 aa10.58□□□□□ -0.72
SORL1-213ENST00000534754 CCDC192P0DO97 292 aa10.58□□□□□ -0.72
SORL1-213ENST00000534754 PDIA6Q15084 440 aa10.58□□□□□ -0.72
SORL1-213ENST00000534754 SOCS7O14512 581 aa10.57□□□□□ -0.72
SORL1-213ENST00000534754 AP5Z1O43299 807 aa10.57□□□□□ -0.72
SORL1-213ENST00000534754 HOXB7P09629 217 aa10.57□□□□□ -0.72
SORL1-213ENST00000534754 AK2P54819 239 aa10.57□□□□□ -0.72
SORL1-213ENST00000534754 HDGFL1Q5TGJ6 251 aa10.57□□□□□ -0.72
SORL1-213ENST00000534754 LRP10Q7Z4F1 713 aa10.57□□□□□ -0.72
SORL1-213ENST00000534754 SPC24Q8NBT2 197 aa10.57□□□□□ -0.72
SORL1-213ENST00000534754 AKT1S1Q96B36 256 aa10.57□□□□□ -0.72
SORL1-213ENST00000534754 SNX14Q9Y5W7 946 aa10.57□□□□□ -0.72
SORL1-213ENST00000534754 COL24A1Q17RW2 1714 aa10.57□□□□□ -0.72
SORL1-213ENST00000534754 STK31Q9BXU1 1019 aa10.57□□□□□ -0.72
SORL1-213ENST00000534754 CCDC87Q9NVE4 849 aa10.57□□□□□ -0.72
SORL1-213ENST00000534754 CHPF2Q9P2E5 772 aa10.57□□□□□ -0.72
SORL1-213ENST00000534754 SGSM2O43147 1006 aa10.56□□□□□ -0.72
SORL1-213ENST00000534754 U2AF2P26368 475 aaKnown RBP eCLIP10.56□□□□□ -0.721e-10■■□□□ 14.4
SORL1-213ENST00000534754 SYCP1Q15431 976 aa10.56□□□□□ -0.72
SORL1-213ENST00000534754 RUFY3Q7L099 469 aa10.56□□□□□ -0.72
SORL1-213ENST00000534754 TEX13AQ9BXU3 409 aaPredicted RBP10.56□□□□□ -0.72
SORL1-213ENST00000534754 IL25Q9H293 177 aa10.56□□□□□ -0.72
SORL1-213ENST00000534754 GNPATO15228 680 aa10.56□□□□□ -0.72
SORL1-213ENST00000534754 STARD3NLO95772 234 aa10.56□□□□□ -0.72
SORL1-213ENST00000534754 FAM200AQ8TCP9 573 aa10.56□□□□□ -0.72
SORL1-213ENST00000534754 SOS1Q07889 1333 aaPredicted RBP10.55□□□□□ -0.72
SORL1-213ENST00000534754 DNM1Q05193 864 aaKnown RBP10.55□□□□□ -0.72
SORL1-213ENST00000534754 RC3H1Q5TC82 1133 aaKnown RBP10.55□□□□□ -0.72
SORL1-213ENST00000534754 PDGFDQ9GZP0 370 aaPredicted RBP10.55□□□□□ -0.72
SORL1-213ENST00000534754 OGFRQ9NZT2 677 aa10.55□□□□□ -0.72
SORL1-213ENST00000534754 COL15A1P39059 1388 aa10.55□□□□□ -0.72
SORL1-213ENST00000534754 MYL6BP14649 208 aa10.54□□□□□ -0.72
SORL1-213ENST00000534754 PTGS1P23219 599 aa10.54□□□□□ -0.72
SORL1-213ENST00000534754 FLIIQ13045 1269 aa10.54□□□□□ -0.72
SORL1-213ENST00000534754 LSG1Q9H089 658 aaKnown RBP10.54□□□□□ -0.72
SORL1-213ENST00000534754 MTMR6Q9Y217 621 aa10.54□□□□□ -0.72
SORL1-213ENST00000534754 LRRFIP2Q9Y608 721 aaKnown RBP10.54□□□□□ -0.72
SORL1-213ENST00000534754 SMTNL1A8MU46 457 aa10.54□□□□□ -0.72
SORL1-213ENST00000534754 RAB11FIP3O75154 756 aa10.54□□□□□ -0.72
SORL1-213ENST00000534754 GJB2P29033 226 aa10.54□□□□□ -0.72
SORL1-213ENST00000534754 EIF5P55010 431 aaKnown RBP10.54□□□□□ -0.72
SORL1-213ENST00000534754 NCBP1Q09161 790 aaKnown RBP10.54□□□□□ -0.72
SORL1-213ENST00000534754 SLC15A2Q16348 729 aa10.54□□□□□ -0.72
SORL1-213ENST00000534754 MAP3K11Q16584 847 aa10.54□□□□□ -0.72
SORL1-213ENST00000534754 TAF3Q5VWG9 929 aa10.54□□□□□ -0.72
SORL1-213ENST00000534754 RASEFQ8IZ41 740 aa10.54□□□□□ -0.72
SORL1-213ENST00000534754 AK7Q96M32 723 aa10.54□□□□□ -0.72
SORL1-213ENST00000534754 IL1RAPL2Q9NP60 686 aa10.54□□□□□ -0.72
SORL1-213ENST00000534754 PNPLA7Q6ZV29 1317 aa10.54□□□□□ -0.72
SORL1-213ENST00000534754 CCDC30Q5VVM6 783 aa10.53□□□□□ -0.72
SORL1-213ENST00000534754 NUTM1Q86Y26 1132 aa10.53□□□□□ -0.72
SORL1-213ENST00000534754 CNTROBQ8N137 903 aa10.53□□□□□ -0.72
SORL1-213ENST00000534754 ZSCAN31Q96LW9 406 aaPredicted RBP10.53□□□□□ -0.72
SORL1-213ENST00000534754 NUP62CLQ9H1M0 184 aa10.53□□□□□ -0.72
SORL1-213ENST00000534754 PHAXQ9H814 394 aaKnown RBP10.53□□□□□ -0.72
SORL1-213ENST00000534754 DDX21Q9NR30 783 aaKnown RBP eCLIP10.53□□□□□ -0.72
SORL1-213ENST00000534754 SH2B1Q9NRF2 756 aaPredicted RBP10.53□□□□□ -0.72
SORL1-213ENST00000534754 ZNF330Q9Y3S2 320 aaPredicted RBP10.53□□□□□ -0.72
SORL1-213ENST00000534754 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.53□□□□□ -0.72
SORL1-213ENST00000534754 A0A0U1RQG5 324 aaPredicted RBP10.53□□□□□ -0.72
SORL1-213ENST00000534754 RPS6KA4O75676 772 aa10.53□□□□□ -0.72
SORL1-213ENST00000534754 CASTP20810 708 aaKnown RBP10.53□□□□□ -0.72
SORL1-213ENST00000534754 CCDC83Q8IWF9 413 aa10.53□□□□□ -0.72
SORL1-213ENST00000534754 PI4K2BQ8TCG2 481 aa10.53□□□□□ -0.72
SORL1-213ENST00000534754 LARP6Q9BRS8 491 aaKnown RBP10.53□□□□□ -0.72
SORL1-213ENST00000534754 HYPKQ9NX55 129 aa10.53□□□□□ -0.72
SORL1-213ENST00000534754 MAP4K4O95819 1239 aaPredicted RBP10.52□□□□□ -0.73
SORL1-213ENST00000534754 UBTFL1P0CB47 393 aaPredicted RBP10.52□□□□□ -0.73
SORL1-213ENST00000534754 PDIA4P13667 645 aaKnown RBP10.52□□□□□ -0.73
SORL1-213ENST00000534754 IL6STP40189 918 aaPredicted RBP10.52□□□□□ -0.73
SORL1-213ENST00000534754 TYRO3Q06418 890 aa10.52□□□□□ -0.73
SORL1-213ENST00000534754 GABPB1Q06547 395 aaPredicted RBP10.52□□□□□ -0.73
SORL1-213ENST00000534754 VPS53Q5VIR6 699 aa10.52□□□□□ -0.73
SORL1-213ENST00000534754 TTLL7Q6ZT98 887 aa10.52□□□□□ -0.73
SORL1-213ENST00000534754 COL23A1Q86Y22 540 aaPredicted RBP10.52□□□□□ -0.73
SORL1-213ENST00000534754 SSH3Q8TE77 659 aa10.52□□□□□ -0.73
SORL1-213ENST00000534754 TFCP2L1Q9NZI6 479 aa10.52□□□□□ -0.73
SORL1-213ENST00000534754 CGNQ9P2M7 1197 aaKnown RBP10.52□□□□□ -0.73
SORL1-213ENST00000534754 DBF4Q9UBU7 674 aaPredicted RBP10.52□□□□□ -0.73
SORL1-213ENST00000534754 PAXBP1Q9Y5B6 917 aa10.52□□□□□ -0.73
SORL1-213ENST00000534754 MRVI1Q9Y6F6 885 aa10.52□□□□□ -0.73
SORL1-213ENST00000534754 PXDNLA1KZ92 1463 aa10.52□□□□□ -0.73
SORL1-213ENST00000534754 VPS37CA5D8V6 355 aaPredicted RBP10.52□□□□□ -0.73
SORL1-213ENST00000534754 LARGE1O95461 756 aa10.52□□□□□ -0.73
SORL1-213ENST00000534754 KRT85P78386 507 aa10.52□□□□□ -0.73
SORL1-213ENST00000534754 CCDC186Q7Z3E2 898 aa10.52□□□□□ -0.73
SORL1-213ENST00000534754 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.52□□□□□ -0.73
SORL1-213ENST00000534754 DRC7Q8IY82 874 aa10.52□□□□□ -0.73
SORL1-213ENST00000534754 PDRG1Q9NUG6 133 aa10.52□□□□□ -0.73
SORL1-213ENST00000534754 STK32BQ9NY57 414 aa10.52□□□□□ -0.73
SORL1-213ENST00000534754 RTCBQ9Y3I0 505 aaKnown RBP10.52□□□□□ -0.73
SORL1-213ENST00000534754 ELP1O95163 1332 aa10.51□□□□□ -0.73
SORL1-213ENST00000534754 TNNT1P13805 278 aa10.51□□□□□ -0.73
SORL1-213ENST00000534754 ZNF771Q7L3S4 317 aaPredicted RBP10.51□□□□□ -0.73
SORL1-213ENST00000534754 XAGE3Q8WTP9 111 aa10.51□□□□□ -0.73
SORL1-213ENST00000534754 ARHGEF1Q92888 912 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms