RNA–Protein interactions for RNA: ENST00000534435.1

SHARPIN-210, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 2

Gene SHARPIN, Length 656 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-210ENST00000534435 C6orf229H3BNL8 230 aa11.05□□□□□ -0.64
SHARPIN-210ENST00000534435 MYCP01106 439 aaPredicted RBP11.05□□□□□ -0.64
SHARPIN-210ENST00000534435 TM4SF4P48230 202 aa11.05□□□□□ -0.64
SHARPIN-210ENST00000534435 DDX46Q7L014 1031 aaKnown RBP11.05□□□□□ -0.64
SHARPIN-210ENST00000534435 SLC17A8Q8NDX2 589 aa11.05□□□□□ -0.64
SHARPIN-210ENST00000534435 PER1O15534 1290 aaPredicted RBP11.04□□□□□ -0.64
SHARPIN-210ENST00000534435 RPS12P25398 132 aaKnown RBP11.04□□□□□ -0.64
SHARPIN-210ENST00000534435 EIF4A1P60842 406 aaKnown RBP11.04□□□□□ -0.64
SHARPIN-210ENST00000534435 TTLL12Q14166 644 aaPredicted RBP11.04□□□□□ -0.64
SHARPIN-210ENST00000534435 TAF7Q15545 349 aaPredicted RBP11.04□□□□□ -0.64
SHARPIN-210ENST00000534435 CHRDL2Q6WN34 429 aa11.04□□□□□ -0.64
SHARPIN-210ENST00000534435 LRP10Q7Z4F1 713 aa11.04□□□□□ -0.64
SHARPIN-210ENST00000534435 REM2Q8IYK8 340 aaPredicted RBP11.04□□□□□ -0.64
SHARPIN-210ENST00000534435 OTUD5Q96G74 571 aa11.04□□□□□ -0.64
SHARPIN-210ENST00000534435 BRCA2P51587 3418 aa11.03□□□□□ -0.64
SHARPIN-210ENST00000534435 NEFLP07196 543 aa11.03□□□□□ -0.64
SHARPIN-210ENST00000534435 VIL1P09327 827 aaKnown RBP11.03□□□□□ -0.64
SHARPIN-210ENST00000534435 PTPN12Q05209 780 aaKnown RBP11.03□□□□□ -0.64
SHARPIN-210ENST00000534435 PDIA6Q15084 440 aa11.03□□□□□ -0.64
SHARPIN-210ENST00000534435 PARP10Q53GL7 1025 aa11.03□□□□□ -0.64
SHARPIN-210ENST00000534435 NLRP10Q86W26 655 aa11.03□□□□□ -0.64
SHARPIN-210ENST00000534435 CD99L2Q8TCZ2 262 aa11.03□□□□□ -0.64
SHARPIN-210ENST00000534435 MXD3Q9BW11 206 aa11.03□□□□□ -0.64
SHARPIN-210ENST00000534435 ZNF280AP59817 542 aaPredicted RBP11.02□□□□□ -0.65
SHARPIN-210ENST00000534435 FKBP1BP68106 108 aa11.02□□□□□ -0.65
SHARPIN-210ENST00000534435 NBPF9Q3BBW0 867 aa11.02□□□□□ -0.65
SHARPIN-210ENST00000534435 NOM1Q5C9Z4 860 aaKnown RBP11.02□□□□□ -0.65
SHARPIN-210ENST00000534435 TBC1D16Q8TBP0 767 aa11.02□□□□□ -0.65
SHARPIN-210ENST00000534435 NECTIN2Q92692 538 aa11.02□□□□□ -0.65
SHARPIN-210ENST00000534435 RBM27Q9P2N5 1060 aaKnown RBP11.02□□□□□ -0.65
SHARPIN-210ENST00000534435 TRMT112Q9UI30 125 aaKnown RBP11.02□□□□□ -0.65
SHARPIN-210ENST00000534435 PAPPA2Q9BXP8 1791 aa11.02□□□□□ -0.65
SHARPIN-210ENST00000534435 WTIPA6NIX2 430 aaPredicted RBP11.01□□□□□ -0.65
SHARPIN-210ENST00000534435 IGF2BP3O00425 579 aaKnown RBP eCLIP11.01□□□□□ -0.65
SHARPIN-210ENST00000534435 U2AF1L5P0DN76 240 aaPredicted RBP11.01□□□□□ -0.65
SHARPIN-210ENST00000534435 U2AF1Q01081 240 aaKnown RBP eCLIP11.01□□□□□ -0.65
SHARPIN-210ENST00000534435 AIMP1Q12904 312 aaKnown RBP11.01□□□□□ -0.65
SHARPIN-210ENST00000534435 RTL5Q5HYW3 569 aaPredicted RBP11.01□□□□□ -0.65
SHARPIN-210ENST00000534435 ERICH6BQ5W0A0 696 aa11.01□□□□□ -0.65
SHARPIN-210ENST00000534435 MYOZ2Q9NPC6 264 aa11.01□□□□□ -0.65
SHARPIN-210ENST00000534435 PTPN22Q9Y2R2 807 aa11.01□□□□□ -0.65
SHARPIN-210ENST00000534435 NUP98P52948 1817 aa11□□□□□ -0.65
SHARPIN-210ENST00000534435 AKAP11Q9UKA4 1901 aa11□□□□□ -0.65
SHARPIN-210ENST00000534435 EIF2S2P20042 333 aaKnown RBP11□□□□□ -0.65
SHARPIN-210ENST00000534435 RSBN1LQ6PCB5 846 aaPredicted RBP11□□□□□ -0.65
SHARPIN-210ENST00000534435 GMLQ99445 158 aa11□□□□□ -0.65
SHARPIN-210ENST00000534435 CFHR5Q9BXR6 569 aa11□□□□□ -0.65
SHARPIN-210ENST00000534435 TRIOBPQ9H2D6 2365 aa11□□□□□ -0.65
SHARPIN-210ENST00000534435 LAMB4A4D0S4 1761 aa10.99□□□□□ -0.65
SHARPIN-210ENST00000534435 SASH1O94885 1247 aa10.99□□□□□ -0.65
SHARPIN-210ENST00000534435 SREBF2Q12772 1141 aa10.99□□□□□ -0.65
SHARPIN-210ENST00000534435 SPRYD7Q5W111 196 aa10.99□□□□□ -0.65
SHARPIN-210ENST00000534435 INTS3Q68E01 1043 aaKnown RBP10.99□□□□□ -0.65
SHARPIN-210ENST00000534435 IFNL1Q8IU54 200 aa10.99□□□□□ -0.65
SHARPIN-210ENST00000534435 ARMC5Q96C12 935 aa10.99□□□□□ -0.65
SHARPIN-210ENST00000534435 CLMNQ96JQ2 1002 aa10.99□□□□□ -0.65
SHARPIN-210ENST00000534435 SH3TC1Q8TE82 1336 aa10.99□□□□□ -0.65
SHARPIN-210ENST00000534435 TAF1P21675 1872 aa10.99□□□□□ -0.65
SHARPIN-210ENST00000534435 CENPFP49454 3210 aa10.98□□□□□ -0.65
SHARPIN-210ENST00000534435 UFL1O94874 794 aa10.98□□□□□ -0.65
SHARPIN-210ENST00000534435 USP17L8P0C7I0 530 aa10.98□□□□□ -0.65
SHARPIN-210ENST00000534435 COPS6Q7L5N1 327 aa10.98□□□□□ -0.65
SHARPIN-210ENST00000534435 XAGE3Q8WTP9 111 aa10.98□□□□□ -0.65
SHARPIN-210ENST00000534435 FAM89AQ96GI7 184 aa10.98□□□□□ -0.65
SHARPIN-210ENST00000534435 SEC31BQ9NQW1 1179 aa10.98□□□□□ -0.65
SHARPIN-210ENST00000534435 ZNF609O15014 1411 aa10.98□□□□□ -0.65
SHARPIN-210ENST00000534435 LRRC37AA6NMS7 1700 aa10.98□□□□□ -0.65
SHARPIN-210ENST00000534435 LAMB2P55268 1798 aa10.98□□□□□ -0.65
SHARPIN-210ENST00000534435 RANBP2P49792 3224 aaKnown RBP10.97□□□□□ -0.65
SHARPIN-210ENST00000534435 SOX1O00570 391 aaPredicted RBP10.97□□□□□ -0.65
SHARPIN-210ENST00000534435 CRHR2Q13324 411 aa10.97□□□□□ -0.65
SHARPIN-210ENST00000534435 ZNF333Q96JL9 665 aa10.97□□□□□ -0.65
SHARPIN-210ENST00000534435 EYA3Q99504 573 aa10.97□□□□□ -0.65
SHARPIN-210ENST00000534435 ZC3H12CQ9C0D7 883 aaKnown RBP10.97□□□□□ -0.65
SHARPIN-210ENST00000534435 ANGEL1Q9UNK9 670 aaKnown RBP10.97□□□□□ -0.65
SHARPIN-210ENST00000534435 PTCH2Q9Y6C5 1203 aa10.97□□□□□ -0.65
SHARPIN-210ENST00000534435 SCN9AQ15858 1988 aa10.96□□□□□ -0.65
SHARPIN-210ENST00000534435 PITPNM2Q9BZ72 1349 aa10.96□□□□□ -0.65
SHARPIN-210ENST00000534435 ATP5J2-PTCD1G3V325 749 aa10.96□□□□□ -0.65
SHARPIN-210ENST00000534435 G3V3G9 751 aa10.96□□□□□ -0.65
SHARPIN-210ENST00000534435 GJA5P36382 358 aa10.96□□□□□ -0.65
SHARPIN-210ENST00000534435 TCIRG1Q13488 830 aa10.96□□□□□ -0.65
SHARPIN-210ENST00000534435 DCAF8Q5TAQ9 597 aa10.96□□□□□ -0.65
SHARPIN-210ENST00000534435 TMC4Q7Z404 712 aa10.96□□□□□ -0.65
SHARPIN-210ENST00000534435 AGBL3Q8NEM8 1001 aa10.96□□□□□ -0.65
SHARPIN-210ENST00000534435 EFCC1Q9HA90 598 aa10.96□□□□□ -0.65
SHARPIN-210ENST00000534435 POLR2AP24928 1970 aaKnown RBP10.96□□□□□ -0.66
SHARPIN-210ENST00000534435 WNT10BO00744 389 aa10.95□□□□□ -0.66
SHARPIN-210ENST00000534435 HTATSF1O43719 755 aaKnown RBP10.95□□□□□ -0.66
SHARPIN-210ENST00000534435 ECM2O94769 699 aaPredicted RBP10.95□□□□□ -0.66
SHARPIN-210ENST00000534435 KRT24Q2M2I5 525 aa10.95□□□□□ -0.66
SHARPIN-210ENST00000534435 SLC4A8Q2Y0W8 1093 aa10.95□□□□□ -0.66
SHARPIN-210ENST00000534435 LDLRAD1Q5T700 205 aa10.95□□□□□ -0.66
SHARPIN-210ENST00000534435 SH3TC2Q8TF17 1288 aa10.95□□□□□ -0.66
SHARPIN-210ENST00000534435 LRCH3Q96II8 777 aa10.95□□□□□ -0.66
SHARPIN-210ENST00000534435 CCDC85AQ96PX6 553 aaPredicted RBP10.95□□□□□ -0.66
SHARPIN-210ENST00000534435 PTPN18Q99952 460 aa10.95□□□□□ -0.66
SHARPIN-210ENST00000534435 TMEM106CQ9BVX2 250 aa10.95□□□□□ -0.66
SHARPIN-210ENST00000534435 PRKRIP1Q9H875 184 aaPredicted RBP10.95□□□□□ -0.66
SHARPIN-210ENST00000534435 SF3B3Q15393 1217 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms