RNA–Protein interactions for RNA: ENST00000533682.1

CLP1-205, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLP1, Length 2,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-205ENST00000533682 ERVV-1B6SEH8 477 aa14.34□□□□□ -0.11
CLP1-205ENST00000533682 IFIT1P09914 478 aaKnown RBP14.34□□□□□ -0.11
CLP1-205ENST00000533682 HSP90AB3PQ58FF7 597 aa14.34□□□□□ -0.11
CLP1-205ENST00000533682 KBTBD3Q8NAB2 608 aa14.34□□□□□ -0.11
CLP1-205ENST00000533682 KCNB2Q92953 911 aa14.34□□□□□ -0.11
CLP1-205ENST00000533682 ZSWIM6Q9HCJ5 1215 aa14.34□□□□□ -0.11
CLP1-205ENST00000533682 RIPOR2Q9Y4F9 1068 aa14.34□□□□□ -0.11
CLP1-205ENST00000533682 FOXD4L6Q3SYB3 417 aaPredicted RBP14.33□□□□□ -0.12
CLP1-205ENST00000533682 VPS53Q5VIR6 699 aa14.33□□□□□ -0.12
CLP1-205ENST00000533682 FOXD4L3Q6VB84 417 aaPredicted RBP14.33□□□□□ -0.12
CLP1-205ENST00000533682 ANKRD36CQ5JPF3 1778 aa14.33□□□□□ -0.12
CLP1-205ENST00000533682 CDHR2Q9BYE9 1310 aa14.33□□□□□ -0.12
CLP1-205ENST00000533682 SNAP23O00161 211 aa14.33□□□□□ -0.12
CLP1-205ENST00000533682 ZKSCAN1P17029 563 aaPredicted RBP14.33□□□□□ -0.12
CLP1-205ENST00000533682 HELBQ8NG08 1087 aaPredicted RBP14.33□□□□□ -0.12
CLP1-205ENST00000533682 PDRG1Q9NUG6 133 aa14.33□□□□□ -0.12
CLP1-205ENST00000533682 MYH3P11055 1940 aa14.33□□□□□ -0.12
CLP1-205ENST00000533682 NWD2Q9ULI1 1742 aa14.32□□□□□ -0.12
CLP1-205ENST00000533682 METTL24Q5JXM2 366 aa14.32□□□□□ -0.12
CLP1-205ENST00000533682 GORABQ5T7V8 394 aa14.32□□□□□ -0.12
CLP1-205ENST00000533682 CLEC17AQ6ZS10 378 aa14.32□□□□□ -0.12
CLP1-205ENST00000533682 LIMCH1Q9UPQ0 1083 aa14.32□□□□□ -0.12
CLP1-205ENST00000533682 CYP46A1Q9Y6A2 500 aa14.32□□□□□ -0.12
CLP1-205ENST00000533682 A0A0G2JLW4 131 aa14.32□□□□□ -0.12
CLP1-205ENST00000533682 CAMTA2O94983 1202 aa14.32□□□□□ -0.12
CLP1-205ENST00000533682 MCMDC2Q4G0Z9 681 aa14.32□□□□□ -0.12
CLP1-205ENST00000533682 INTS4Q96HW7 963 aaKnown RBP14.32□□□□□ -0.12
CLP1-205ENST00000533682 CNNM1Q9NRU3 951 aa14.32□□□□□ -0.12
CLP1-205ENST00000533682 PDE8AO60658 829 aa14.31□□□□□ -0.12
CLP1-205ENST00000533682 ANKRD18BA2A2Z9 1011 aa14.31□□□□□ -0.12
CLP1-205ENST00000533682 NECAB1Q8N987 351 aa14.31□□□□□ -0.12
CLP1-205ENST00000533682 SEC31BQ9NQW1 1179 aa14.31□□□□□ -0.12
CLP1-205ENST00000533682 RIC1Q4ADV7 1423 aa14.31□□□□□ -0.12
CLP1-205ENST00000533682 TCHHQ07283 1943 aa14.3□□□□□ -0.12
CLP1-205ENST00000533682 VPS72Q15906 364 aa14.3□□□□□ -0.12
CLP1-205ENST00000533682 TTC39AQ5SRH9 613 aa14.3□□□□□ -0.12
CLP1-205ENST00000533682 CCDC83Q8IWF9 413 aa14.3□□□□□ -0.12
CLP1-205ENST00000533682 LINC00116Q8NCU8 138 aa14.3□□□□□ -0.12
CLP1-205ENST00000533682 TM6SF1Q9BZW5 370 aa14.3□□□□□ -0.12
CLP1-205ENST00000533682 NIP7Q9Y221 180 aaKnown RBP eCLIP14.3□□□□□ -0.12
CLP1-205ENST00000533682 ZAP70P43403 619 aa14.3□□□□□ -0.12
CLP1-205ENST00000533682 ST3GAL1Q11201 340 aa14.3□□□□□ -0.12
CLP1-205ENST00000533682 ATP2B3Q16720 1220 aa14.3□□□□□ -0.12
CLP1-205ENST00000533682 ME3Q16798 604 aa14.3□□□□□ -0.12
CLP1-205ENST00000533682 CCDC158Q5M9N0 1113 aa14.3□□□□□ -0.12
CLP1-205ENST00000533682 TPCN1Q9ULQ1 816 aa14.3□□□□□ -0.12
CLP1-205ENST00000533682 RPAP1Q9BWH6 1393 aaPredicted RBP14.29□□□□□ -0.12
CLP1-205ENST00000533682 BRD1O95696 1058 aa14.29□□□□□ -0.12
CLP1-205ENST00000533682 CYP21A2P08686 494 aa14.29□□□□□ -0.12
CLP1-205ENST00000533682 USPL1Q5W0Q7 1092 aa14.29□□□□□ -0.12
CLP1-205ENST00000533682 USP21Q9UK80 565 aa14.29□□□□□ -0.12
CLP1-205ENST00000533682 AKAP2Q9Y2D5 859 aa14.29□□□□□ -0.12
CLP1-205ENST00000533682 JCADQ9P266 1359 aa14.29□□□□□ -0.12
CLP1-205ENST00000533682 PRPF40AO75400 957 aaKnown RBP14.29□□□□□ -0.12
CLP1-205ENST00000533682 VGLL2Q8N8G2 317 aa14.29□□□□□ -0.12
CLP1-205ENST00000533682 LMBRD1Q9NUN5 540 aa14.29□□□□□ -0.12
CLP1-205ENST00000533682 ZMYM1Q5SVZ6 1142 aa14.28□□□□□ -0.12
CLP1-205ENST00000533682 FNBP4Q8N3X1 1017 aaPredicted RBP14.28□□□□□ -0.12
CLP1-205ENST00000533682 OSBP2Q969R2 916 aa14.28□□□□□ -0.12
CLP1-205ENST00000533682 SH3TC1Q8TE82 1336 aa14.28□□□□□ -0.12
CLP1-205ENST00000533682 M0R2C6 588 aa14.27□□□□□ -0.12
CLP1-205ENST00000533682 MCAMP43121 646 aa14.27□□□□□ -0.12
CLP1-205ENST00000533682 RNF20Q5VTR2 975 aa14.27□□□□□ -0.12
CLP1-205ENST00000533682 UTP14AQ9BVJ6 771 aaKnown RBP14.27□□□□□ -0.12
CLP1-205ENST00000533682 FBXO3Q9UK99 471 aa14.27□□□□□ -0.12
CLP1-205ENST00000533682 MYO5AQ9Y4I1 1855 aaKnown RBP14.27□□□□□ -0.12
CLP1-205ENST00000533682 MAST3O60307 1309 aa14.27□□□□□ -0.12
CLP1-205ENST00000533682 GOLGA6L22H0YM25 854 aa14.27□□□□□ -0.13
CLP1-205ENST00000533682 RNF113AO15541 343 aaKnown RBP14.27□□□□□ -0.13
CLP1-205ENST00000533682 BLOC1S2Q6QNY1 142 aa14.27□□□□□ -0.13
CLP1-205ENST00000533682 LRRC2Q9BYS8 371 aa14.27□□□□□ -0.13
CLP1-205ENST00000533682 DDX49Q9Y6V7 483 aaKnown RBP14.27□□□□□ -0.13
CLP1-205ENST00000533682 PDE8BO95263 885 aa14.26□□□□□ -0.13
CLP1-205ENST00000533682 RPS6KB1P23443 525 aa14.26□□□□□ -0.13
CLP1-205ENST00000533682 TOB2Q14106 344 aaPredicted RBP14.26□□□□□ -0.13
CLP1-205ENST00000533682 BICDL1Q6ZP65 573 aa14.26□□□□□ -0.13
CLP1-205ENST00000533682 STOX1Q6ZVD7 989 aa14.26□□□□□ -0.13
CLP1-205ENST00000533682 AKAP11Q9UKA4 1901 aa14.26□□□□□ -0.13
CLP1-205ENST00000533682 HSPD1P10809 573 aaKnown RBP14.26□□□□□ -0.13
CLP1-205ENST00000533682 PHKA1P46020 1223 aa14.26□□□□□ -0.13
CLP1-205ENST00000533682 TTLL5Q6EMB2 1281 aa14.26□□□□□ -0.13
CLP1-205ENST00000533682 SMARCC1Q92922 1105 aaPredicted RBP14.26□□□□□ -0.13
CLP1-205ENST00000533682 GDPD2Q9HCC8 539 aa14.26□□□□□ -0.13
CLP1-205ENST00000533682 NSFL1CQ9UNZ2 370 aaKnown RBP14.26□□□□□ -0.13
CLP1-205ENST00000533682 TAF1P21675 1872 aa14.26□□□□□ -0.13
CLP1-205ENST00000533682 NTSR2O95665 410 aa14.25□□□□□ -0.13
CLP1-205ENST00000533682 NCLP19338 710 aaKnown RBP14.25□□□□□ -0.13
CLP1-205ENST00000533682 PSMA5P28066 241 aa14.25□□□□□ -0.13
CLP1-205ENST00000533682 STK3Q13188 491 aa14.25□□□□□ -0.13
CLP1-205ENST00000533682 C3orf67Q6ZVT6 689 aa14.25□□□□□ -0.13
CLP1-205ENST00000533682 AMIGO3Q86WK7 504 aa14.25□□□□□ -0.13
CLP1-205ENST00000533682 GAS2L3Q86XJ1 694 aa14.25□□□□□ -0.13
CLP1-205ENST00000533682 HELLSQ9NRZ9 838 aa14.25□□□□□ -0.13
CLP1-205ENST00000533682 RFX7Q2KHR2 1363 aa14.25□□□□□ -0.13
CLP1-205ENST00000533682 WTIPA6NIX2 430 aaPredicted RBP14.25□□□□□ -0.13
CLP1-205ENST00000533682 SYT1P21579 422 aa14.25□□□□□ -0.13
CLP1-205ENST00000533682 WASHC4Q2M389 1173 aa14.25□□□□□ -0.13
CLP1-205ENST00000533682 TSGA10IPQ3SY00 556 aa14.25□□□□□ -0.13
CLP1-205ENST00000533682 PUS7LQ9H0K6 701 aaKnown RBP14.25□□□□□ -0.13
CLP1-205ENST00000533682 COL4A1P02462 1669 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms