RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 KRT77Q7Z794 578 aa6.46□□□□□ -1.38
ECHDC1-222ENST00000531967 CSRNP1Q96S65 589 aa6.46□□□□□ -1.38
ECHDC1-222ENST00000531967 RBM42Q9BTD8 480 aaKnown RBP6.46□□□□□ -1.38
ECHDC1-222ENST00000531967 SRRTQ9BXP5 876 aaKnown RBP6.46□□□□□ -1.38
ECHDC1-222ENST00000531967 CDH19Q9H159 772 aa6.46□□□□□ -1.38
ECHDC1-222ENST00000531967 ALDH8A1Q9H2A2 487 aaPredicted RBP6.46□□□□□ -1.38
ECHDC1-222ENST00000531967 G3V3G9 751 aa6.45□□□□□ -1.38
ECHDC1-222ENST00000531967 CT47B1P0C2W7 299 aaPredicted RBP6.45□□□□□ -1.38
ECHDC1-222ENST00000531967 SCP2P22307 547 aa6.45□□□□□ -1.38
ECHDC1-222ENST00000531967 RASGRF1Q13972 1273 aa6.45□□□□□ -1.38
ECHDC1-222ENST00000531967 MLC1Q15049 377 aa6.45□□□□□ -1.38
ECHDC1-222ENST00000531967 C21orf62-AS1Q17RA5 79 aa6.45□□□□□ -1.38
ECHDC1-222ENST00000531967 TBC1D10BQ4KMP7 808 aaPredicted RBP6.45□□□□□ -1.38
ECHDC1-222ENST00000531967 TM4SF20Q53R12 229 aa6.45□□□□□ -1.38
ECHDC1-222ENST00000531967 CT47A1Q5JQC4 288 aaPredicted RBP6.45□□□□□ -1.38
ECHDC1-222ENST00000531967 C16orf46Q6P387 395 aa6.45□□□□□ -1.38
ECHDC1-222ENST00000531967 LYPD8Q6UX82 237 aa6.45□□□□□ -1.38
ECHDC1-222ENST00000531967 ZSCAN30Q86W11 494 aa6.45□□□□□ -1.38
ECHDC1-222ENST00000531967 DGKHQ86XP1 1220 aa6.45□□□□□ -1.38
ECHDC1-222ENST00000531967 SYNPOQ8N3V7 929 aa6.45□□□□□ -1.38
ECHDC1-222ENST00000531967 SELENOOQ9BVL4 669 aa6.45□□□□□ -1.38
ECHDC1-222ENST00000531967 NBPF3Q9H094 633 aa6.45□□□□□ -1.38
ECHDC1-222ENST00000531967 CAAP1Q9H8G2 361 aa6.45□□□□□ -1.38
ECHDC1-222ENST00000531967 KBTBD4Q9NVX7 518 aa6.45□□□□□ -1.38
ECHDC1-222ENST00000531967 EVLQ9UI08 416 aaPredicted RBP6.45□□□□□ -1.38
ECHDC1-222ENST00000531967 TTLL13PA6NNM8 815 aa6.45□□□□□ -1.38
ECHDC1-222ENST00000531967 M0R2N6 131 aa6.45□□□□□ -1.38
ECHDC1-222ENST00000531967 KATNA1O75449 491 aa6.45□□□□□ -1.38
ECHDC1-222ENST00000531967 MYCLP1P12525 358 aaPredicted RBP6.45□□□□□ -1.38
ECHDC1-222ENST00000531967 IGFBP4P22692 258 aa6.45□□□□□ -1.38
ECHDC1-222ENST00000531967 SOX9P48436 509 aa6.45□□□□□ -1.38
ECHDC1-222ENST00000531967 IL31Q6EBC2 164 aa6.45□□□□□ -1.38
ECHDC1-222ENST00000531967 PDXDC1Q6P996 788 aa6.45□□□□□ -1.38
ECHDC1-222ENST00000531967 TCEAL8Q8IYN2 117 aa6.45□□□□□ -1.38
ECHDC1-222ENST00000531967 GJD3Q8N144 294 aa6.45□□□□□ -1.38
ECHDC1-222ENST00000531967 PPHLN1Q8NEY8 458 aaKnown RBP6.45□□□□□ -1.38
ECHDC1-222ENST00000531967 THAP3Q8WTV1 239 aaPredicted RBP6.45□□□□□ -1.38
ECHDC1-222ENST00000531967 PHF12Q96QT6 1004 aa6.45□□□□□ -1.38
ECHDC1-222ENST00000531967 CWC25Q9NXE8 425 aaPredicted RBP6.45□□□□□ -1.38
ECHDC1-222ENST00000531967 SLC45A1Q9Y2W3 748 aa6.45□□□□□ -1.38
ECHDC1-222ENST00000531967 FAM200BP0CF97 657 aa6.44□□□□□ -1.38
ECHDC1-222ENST00000531967 PURAQ00577 322 aaKnown RBP6.44□□□□□ -1.38
ECHDC1-222ENST00000531967 FAM160A1Q05DH4 1040 aa6.44□□□□□ -1.38
ECHDC1-222ENST00000531967 TOMM20Q15388 145 aa6.44□□□□□ -1.38
ECHDC1-222ENST00000531967 CDC37Q16543 378 aaPredicted RBP6.44□□□□□ -1.38
ECHDC1-222ENST00000531967 NXNQ6DKJ4 435 aa6.44□□□□□ -1.38
ECHDC1-222ENST00000531967 MSL3Q8N5Y2 521 aaKnown RBP6.44□□□□□ -1.38
ECHDC1-222ENST00000531967 ENAHQ8N8S7 591 aaPredicted RBP6.44□□□□□ -1.38
ECHDC1-222ENST00000531967 NUDT16Q96DE0 195 aaKnown RBP6.44□□□□□ -1.38
ECHDC1-222ENST00000531967 GPR101Q96P66 508 aaPredicted RBP6.44□□□□□ -1.38
ECHDC1-222ENST00000531967 RETREG1Q9H6L5 497 aa6.44□□□□□ -1.38
ECHDC1-222ENST00000531967 NOB1Q9ULX3 412 aaKnown RBP6.44□□□□□ -1.38
ECHDC1-222ENST00000531967 OPLAHO14841 1288 aa6.44□□□□□ -1.38
ECHDC1-222ENST00000531967 NEK3P51956 506 aa6.44□□□□□ -1.38
ECHDC1-222ENST00000531967 GPSM2P81274 684 aa6.44□□□□□ -1.38
ECHDC1-222ENST00000531967 PIN1Q13526 163 aaPredicted RBP6.44□□□□□ -1.38
ECHDC1-222ENST00000531967 FAM102BQ5T8I3 360 aa6.44□□□□□ -1.38
ECHDC1-222ENST00000531967 MFSD3Q96ES6 412 aa6.44□□□□□ -1.38
ECHDC1-222ENST00000531967 STIM2Q9P246 746 aa6.44□□□□□ -1.38
ECHDC1-222ENST00000531967 ZRANB1Q9UGI0 708 aa6.44□□□□□ -1.38
ECHDC1-222ENST00000531967 ADAMTS1Q9UHI8 967 aa6.44□□□□□ -1.38
ECHDC1-222ENST00000531967 PRPF3O43395 683 aaKnown RBP6.43□□□□□ -1.38
ECHDC1-222ENST00000531967 EPB42P16452 691 aa6.43□□□□□ -1.38
ECHDC1-222ENST00000531967 DEKP35659 375 aaKnown RBP6.43□□□□□ -1.38
ECHDC1-222ENST00000531967 HTR3AP46098 478 aa6.43□□□□□ -1.38
ECHDC1-222ENST00000531967 SARSP49591 514 aaKnown RBP6.43□□□□□ -1.38
ECHDC1-222ENST00000531967 GFOD2Q3B7J2 385 aa6.43□□□□□ -1.38
ECHDC1-222ENST00000531967 HYIQ5T013 277 aa6.43□□□□□ -1.38
ECHDC1-222ENST00000531967 MORC1Q86VD1 984 aa6.43□□□□□ -1.38
ECHDC1-222ENST00000531967 UBR7Q8N806 425 aa6.43□□□□□ -1.38
ECHDC1-222ENST00000531967 JMYQ8N9B5 988 aa6.43□□□□□ -1.38
ECHDC1-222ENST00000531967 CPLX3Q8WVH0 158 aa6.43□□□□□ -1.38
ECHDC1-222ENST00000531967 SKA1Q96BD8 255 aa6.43□□□□□ -1.38
ECHDC1-222ENST00000531967 TTC14Q96N46 770 aa6.43□□□□□ -1.38
ECHDC1-222ENST00000531967 OCSTAMPQ9BR26 566 aa6.43□□□□□ -1.38
ECHDC1-222ENST00000531967 RTFDC1Q9BY42 306 aaPredicted RBP6.43□□□□□ -1.38
ECHDC1-222ENST00000531967 LGR6Q9HBX8 967 aa6.43□□□□□ -1.38
ECHDC1-222ENST00000531967 DIS3Q9Y2L1 958 aaKnown RBP6.43□□□□□ -1.38
ECHDC1-222ENST00000531967 PTCH2Q9Y6C5 1203 aa6.43□□□□□ -1.38
ECHDC1-222ENST00000531967 SLC34A2O95436 690 aa6.43□□□□□ -1.38
ECHDC1-222ENST00000531967 TGFB3P10600 412 aa6.43□□□□□ -1.38
ECHDC1-222ENST00000531967 DDR2Q16832 855 aa6.43□□□□□ -1.38
ECHDC1-222ENST00000531967 RETREG3Q86VR2 466 aa6.43□□□□□ -1.38
ECHDC1-222ENST00000531967 RSPH1Q8WYR4 309 aa6.43□□□□□ -1.38
ECHDC1-222ENST00000531967 ZDHHC16Q969W1 377 aa6.43□□□□□ -1.38
ECHDC1-222ENST00000531967 KCNH8Q96L42 1107 aa6.43□□□□□ -1.38
ECHDC1-222ENST00000531967 ST7Q9NRC1 585 aa6.43□□□□□ -1.38
ECHDC1-222ENST00000531967 GPSM3Q9Y4H4 160 aa6.43□□□□□ -1.38
ECHDC1-222ENST00000531967 SMAD7O15105 426 aaKnown RBP6.42□□□□□ -1.38
ECHDC1-222ENST00000531967 PIP5K1CO60331 668 aa6.42□□□□□ -1.38
ECHDC1-222ENST00000531967 SLC10A3P09131 477 aa6.42□□□□□ -1.38
ECHDC1-222ENST00000531967 TRIM27P14373 513 aa6.42□□□□□ -1.38
ECHDC1-222ENST00000531967 SOX5P35711 763 aa6.42□□□□□ -1.38
ECHDC1-222ENST00000531967 HALP42357 657 aa6.42□□□□□ -1.38
ECHDC1-222ENST00000531967 APOBRQ0VD83 1088 aa6.42□□□□□ -1.38
ECHDC1-222ENST00000531967 ORC1Q13415 861 aa6.42□□□□□ -1.38
ECHDC1-222ENST00000531967 SETDB1Q15047 1291 aa6.42□□□□□ -1.38
ECHDC1-222ENST00000531967 CCDC92Q53HC0 331 aaPredicted RBP6.42□□□□□ -1.38
ECHDC1-222ENST00000531967 STK11IPQ8N1F8 1099 aa6.42□□□□□ -1.38
ECHDC1-222ENST00000531967 MAGEB6Q8N7X4 407 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms