RNA–Protein interactions for RNA: ENST00000531582.1

ECHDC1-221, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 4

Gene ECHDC1, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-221ENST00000531582 FEZ2Q9UHY8 353 aaPredicted RBP6□□□□□ -1.45
ECHDC1-221ENST00000531582 RTCBQ9Y3I0 505 aaKnown RBP6□□□□□ -1.45
ECHDC1-221ENST00000531582 WFS1O76024 890 aa5.99□□□□□ -1.45
ECHDC1-221ENST00000531582 VEGFBP49765 207 aa5.99□□□□□ -1.45
ECHDC1-221ENST00000531582 MTMR3Q13615 1198 aa5.99□□□□□ -1.45
ECHDC1-221ENST00000531582 CCINQ13939 588 aa5.99□□□□□ -1.45
ECHDC1-221ENST00000531582 CMTR1Q8N1G2 835 aaKnown RBP5.99□□□□□ -1.45
ECHDC1-221ENST00000531582 PNMA5Q96PV4 448 aa5.99□□□□□ -1.45
ECHDC1-221ENST00000531582 DCTN4Q9UJW0 460 aa5.99□□□□□ -1.45
ECHDC1-221ENST00000531582 VGLL3A8MV65 326 aa5.98□□□□□ -1.45
ECHDC1-221ENST00000531582 ZBTB39O15060 712 aa5.98□□□□□ -1.45
ECHDC1-221ENST00000531582 BMP4P12644 408 aa5.98□□□□□ -1.45
ECHDC1-221ENST00000531582 ERCC3P19447 782 aa5.98□□□□□ -1.45
ECHDC1-221ENST00000531582 ARHGAP4P98171 946 aa5.98□□□□□ -1.45
ECHDC1-221ENST00000531582 DNM1Q05193 864 aaKnown RBP5.98□□□□□ -1.45
ECHDC1-221ENST00000531582 LMOD3Q0VAK6 560 aa5.98□□□□□ -1.45
ECHDC1-221ENST00000531582 PCSK7Q16549 785 aa5.98□□□□□ -1.45
ECHDC1-221ENST00000531582 CCDC96Q2M329 555 aa5.98□□□□□ -1.45
ECHDC1-221ENST00000531582 PDE12Q6L8Q7 609 aaKnown RBP5.98□□□□□ -1.45
ECHDC1-221ENST00000531582 CTR9Q6PD62 1173 aa5.98□□□□□ -1.45
ECHDC1-221ENST00000531582 XKR5Q6UX68 686 aa5.98□□□□□ -1.45
ECHDC1-221ENST00000531582 TREML4Q6UXN2 200 aa5.98□□□□□ -1.45
ECHDC1-221ENST00000531582 ZSCAN29Q8IWY8 852 aaPredicted RBP5.98□□□□□ -1.45
ECHDC1-221ENST00000531582 RGL4Q8IZJ4 473 aa5.98□□□□□ -1.45
ECHDC1-221ENST00000531582 PRR12Q9ULL5 1215 aa5.98□□□□□ -1.45
ECHDC1-221ENST00000531582 GPR25O00155 361 aa5.97□□□□□ -1.45
ECHDC1-221ENST00000531582 PDGFAP04085 211 aa5.97□□□□□ -1.45
ECHDC1-221ENST00000531582 ZSCAN20P17040 1043 aaPredicted RBP5.97□□□□□ -1.45
ECHDC1-221ENST00000531582 SRSF11Q05519 484 aaKnown RBP5.97□□□□□ -1.45
ECHDC1-221ENST00000531582 SPEM2Q0P670 501 aa5.97□□□□□ -1.45
ECHDC1-221ENST00000531582 SFSWAPQ12872 951 aaKnown RBP5.97□□□□□ -1.45
ECHDC1-221ENST00000531582 ECM1Q16610 540 aa5.97□□□□□ -1.45
ECHDC1-221ENST00000531582 TMCO4Q5TGY1 634 aa5.97□□□□□ -1.45
ECHDC1-221ENST00000531582 SPTY2D1Q68D10 685 aaPredicted RBP5.97□□□□□ -1.45
ECHDC1-221ENST00000531582 GPR152Q8TDT2 470 aa5.97□□□□□ -1.45
ECHDC1-221ENST00000531582 EDEM1Q92611 657 aa5.97□□□□□ -1.45
ECHDC1-221ENST00000531582 FRAT1Q92837 279 aaPredicted RBP5.97□□□□□ -1.45
ECHDC1-221ENST00000531582 ZNF775Q96BV0 537 aaPredicted RBP5.97□□□□□ -1.45
ECHDC1-221ENST00000531582 NUDT16Q96DE0 195 aaKnown RBP5.97□□□□□ -1.45
ECHDC1-221ENST00000531582 KLRG1Q96E93 195 aa5.97□□□□□ -1.45
ECHDC1-221ENST00000531582 DMRTB1Q96MA1 342 aa5.97□□□□□ -1.45
ECHDC1-221ENST00000531582 FAM210AQ96ND0 272 aa5.97□□□□□ -1.45
ECHDC1-221ENST00000531582 COL25A1Q9BXS0 654 aaPredicted RBP5.97□□□□□ -1.45
ECHDC1-221ENST00000531582 RBCK1Q9BYM8 510 aa5.97□□□□□ -1.45
ECHDC1-221ENST00000531582 NUB1Q9Y5A7 615 aa5.97□□□□□ -1.45
ECHDC1-221ENST00000531582 HMGB1P1B2RPK0 211 aaPredicted RBP5.96□□□□□ -1.46
ECHDC1-221ENST00000531582 UBAP1LF5GYI3 381 aa5.96□□□□□ -1.46
ECHDC1-221ENST00000531582 ZNF500O60304 480 aaPredicted RBP5.96□□□□□ -1.46
ECHDC1-221ENST00000531582 FZD6O60353 706 aa5.96□□□□□ -1.46
ECHDC1-221ENST00000531582 XYLBO75191 536 aa5.96□□□□□ -1.46
ECHDC1-221ENST00000531582 ARAFP10398 606 aa5.96□□□□□ -1.46
ECHDC1-221ENST00000531582 MARSP56192 900 aaKnown RBP5.96□□□□□ -1.46
ECHDC1-221ENST00000531582 MTA1Q13330 715 aa5.96□□□□□ -1.46
ECHDC1-221ENST00000531582 FAM50AQ14320 339 aaKnown RBP5.96□□□□□ -1.46
ECHDC1-221ENST00000531582 MYBPC2Q14324 1141 aa5.96□□□□□ -1.46
ECHDC1-221ENST00000531582 FAM26DQ5JW98 314 aa5.96□□□□□ -1.46
ECHDC1-221ENST00000531582 ANKRD23Q86SG2 305 aa5.96□□□□□ -1.46
ECHDC1-221ENST00000531582 GPR161Q8N6U8 529 aaKnown RBP5.96□□□□□ -1.46
ECHDC1-221ENST00000531582 PMEPA1Q969W9 287 aa5.96□□□□□ -1.46
ECHDC1-221ENST00000531582 TSPAN18Q96SJ8 248 aa5.96□□□□□ -1.46
ECHDC1-221ENST00000531582 GSX2Q9BZM3 304 aa5.96□□□□□ -1.46
ECHDC1-221ENST00000531582 LRRC4BQ9NT99 713 aa5.96□□□□□ -1.46
ECHDC1-221ENST00000531582 GDF2Q9UK05 429 aaPredicted RBP5.96□□□□□ -1.46
ECHDC1-221ENST00000531582 ZHX1Q9UKY1 873 aaPredicted RBP5.96□□□□□ -1.46
ECHDC1-221ENST00000531582 ISY1Q9ULR0 285 aaKnown RBP5.96□□□□□ -1.46
ECHDC1-221ENST00000531582 POLIQ9UNA4 740 aa5.96□□□□□ -1.46
ECHDC1-221ENST00000531582 CEP83Q9Y592 693 aa5.96□□□□□ -1.46
ECHDC1-221ENST00000531582 KCNMB2Q9Y691 235 aa5.96□□□□□ -1.46
ECHDC1-221ENST00000531582 CCDC66A2RUB6 948 aa5.95□□□□□ -1.46
ECHDC1-221ENST00000531582 ANP32CO43423 234 aa5.95□□□□□ -1.46
ECHDC1-221ENST00000531582 KIF1CO43896 1103 aaKnown RBP5.95□□□□□ -1.46
ECHDC1-221ENST00000531582 SIN3BO75182 1162 aa5.95□□□□□ -1.46
ECHDC1-221ENST00000531582 MAP3K6O95382 1288 aa5.95□□□□□ -1.46
ECHDC1-221ENST00000531582 NEFHP12036 1026 aa5.95□□□□□ -1.46
ECHDC1-221ENST00000531582 CD33P20138 364 aa5.95□□□□□ -1.46
ECHDC1-221ENST00000531582 ADH6P28332 368 aa5.95□□□□□ -1.46
ECHDC1-221ENST00000531582 MAPK1P28482 360 aa5.95□□□□□ -1.46
ECHDC1-221ENST00000531582 GAS6Q14393 721 aa5.95□□□□□ -1.46
ECHDC1-221ENST00000531582 ZNF468Q5VIY5 522 aaPredicted RBP5.95□□□□□ -1.46
ECHDC1-221ENST00000531582 NLRP13Q86W25 1043 aa5.95□□□□□ -1.46
ECHDC1-221ENST00000531582 ATCAYQ86WG3 371 aa5.95□□□□□ -1.46
ECHDC1-221ENST00000531582 GJD3Q8N144 294 aa5.95□□□□□ -1.46
ECHDC1-221ENST00000531582 SDR16C5Q8N3Y7 309 aa5.95□□□□□ -1.46
ECHDC1-221ENST00000531582 GOLGA6L1Q8N7Z2 621 aa5.95□□□□□ -1.46
ECHDC1-221ENST00000531582 PAIP2Q9BPZ3 127 aaKnown RBP5.95□□□□□ -1.46
ECHDC1-221ENST00000531582 CCDC94Q9BW85 323 aaPredicted RBP5.95□□□□□ -1.46
ECHDC1-221ENST00000531582 MRVI1Q9Y6F6 885 aa5.95□□□□□ -1.46
ECHDC1-221ENST00000531582 LOC102724159A0A0B4J2E5 919 aa5.94□□□□□ -1.46
ECHDC1-221ENST00000531582 CTBSQ01459 385 aa5.94□□□□□ -1.46
ECHDC1-221ENST00000531582 PWP2Q15269 919 aaKnown RBP5.94□□□□□ -1.46
ECHDC1-221ENST00000531582 C8orf34Q49A92 452 aa5.94□□□□□ -1.46
ECHDC1-221ENST00000531582 TTC39BQ5VTQ0 682 aaPredicted RBP5.94□□□□□ -1.46
ECHDC1-221ENST00000531582 ZNF438Q7Z4V0 828 aa5.94□□□□□ -1.46
ECHDC1-221ENST00000531582 MSL3Q8N5Y2 521 aaKnown RBP5.94□□□□□ -1.46
ECHDC1-221ENST00000531582 TMC1Q8TDI8 760 aa5.94□□□□□ -1.46
ECHDC1-221ENST00000531582 MYCBPQ99417 103 aaPredicted RBP5.94□□□□□ -1.46
ECHDC1-221ENST00000531582 STRN4Q9NRL3 753 aa5.94□□□□□ -1.46
ECHDC1-221ENST00000531582 CCDC87Q9NVE4 849 aa5.94□□□□□ -1.46
ECHDC1-221ENST00000531582 SCRIBQ14160 1630 aa5.94□□□□□ -1.46
ECHDC1-221ENST00000531582 ERBB4Q15303 1308 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms