RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 PRMT3O60678 531 aa10.27□□□□□ -0.77
PTPRK-220ENST00000531466 HOXD8P13378 290 aaPredicted RBP10.27□□□□□ -0.77
PTPRK-220ENST00000531466 SSTR4P31391 388 aa10.27□□□□□ -0.77
PTPRK-220ENST00000531466 SOX18P35713 384 aa10.27□□□□□ -0.77
PTPRK-220ENST00000531466 SAP130Q9H0E3 1048 aa10.27□□□□□ -0.77
PTPRK-220ENST00000531466 GLB1P16278 677 aa10.26□□□□□ -0.77
PTPRK-220ENST00000531466 NLRP13Q86W25 1043 aa10.26□□□□□ -0.77
PTPRK-220ENST00000531466 SRA1Q9HD15 236 aaKnown RBP10.26□□□□□ -0.77
PTPRK-220ENST00000531466 FAM26DQ5JW98 314 aa10.25□□□□□ -0.77
PTPRK-220ENST00000531466 LCE3BQ5TA77 95 aa10.25□□□□□ -0.77
PTPRK-220ENST00000531466 MAP4K3Q8IVH8 894 aa10.25□□□□□ -0.77
PTPRK-220ENST00000531466 Q6ZS46 218 aa10.24□□□□□ -0.77
PTPRK-220ENST00000531466 ZNF777Q9ULD5 760 aaPredicted RBP10.24□□□□□ -0.77
PTPRK-220ENST00000531466 COL13A1Q5TAT6 717 aaPredicted RBP10.23□□□□□ -0.77
PTPRK-220ENST00000531466 GALNT11Q8NCW6 608 aa10.23□□□□□ -0.77
PTPRK-220ENST00000531466 PPME1Q9Y570 386 aa10.23□□□□□ -0.77
PTPRK-220ENST00000531466 UBAP1LF5GYI3 381 aa10.22□□□□□ -0.77
PTPRK-220ENST00000531466 LINC01387J3KSC0 135 aa10.22□□□□□ -0.77
PTPRK-220ENST00000531466 BRD2P25440 801 aaKnown RBP10.22□□□□□ -0.77
PTPRK-220ENST00000531466 ATP11AP98196 1134 aa10.22□□□□□ -0.77
PTPRK-220ENST00000531466 OCLNQ16625 522 aa10.22□□□□□ -0.77
PTPRK-220ENST00000531466 SWI5Q1ZZU3 235 aa10.22□□□□□ -0.77
PTPRK-220ENST00000531466 C16orf46Q6P387 395 aa10.22□□□□□ -0.77
PTPRK-220ENST00000531466 TXNDC11Q6PKC3 985 aa10.22□□□□□ -0.77
PTPRK-220ENST00000531466 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.22□□□□□ -0.77
PTPRK-220ENST00000531466 DCAF11Q8TEB1 546 aa10.22□□□□□ -0.77
PTPRK-220ENST00000531466 MKNK1Q9BUB5 465 aa10.22□□□□□ -0.77
PTPRK-220ENST00000531466 LACRTQ9GZZ8 138 aa10.22□□□□□ -0.77
PTPRK-220ENST00000531466 ACIN1Q9UKV3 1341 aaKnown RBP10.22□□□□□ -0.77
PTPRK-220ENST00000531466 WISP1O95388 367 aa10.21□□□□□ -0.77
PTPRK-220ENST00000531466 TMEM132AQ24JP5 1023 aa10.21□□□□□ -0.77
PTPRK-220ENST00000531466 OR13H1Q8NG92 308 aa10.21□□□□□ -0.77
PTPRK-220ENST00000531466 MUC3BQ9H195 1237 aa10.21□□□□□ -0.77
PTPRK-220ENST00000531466 ZMIZ1Q9ULJ6 1067 aa10.21□□□□□ -0.77
PTPRK-220ENST00000531466 PTCD1O75127 700 aaKnown RBP10.2□□□□□ -0.78
PTPRK-220ENST00000531466 CDC25BP30305 580 aa10.2□□□□□ -0.78
PTPRK-220ENST00000531466 MCTP1Q6DN14 999 aa10.2□□□□□ -0.78
PTPRK-220ENST00000531466 CAPN12Q6ZSI9 719 aa10.2□□□□□ -0.78
PTPRK-220ENST00000531466 SLC51AQ86UW1 340 aa10.2□□□□□ -0.78
PTPRK-220ENST00000531466 UBL7Q96S82 380 aaPredicted RBP10.2□□□□□ -0.78
PTPRK-220ENST00000531466 RAXQ9Y2V3 346 aa10.2□□□□□ -0.78
PTPRK-220ENST00000531466 TNFRSF10BO14763 440 aa10.19□□□□□ -0.78
PTPRK-220ENST00000531466 CACTIN-AS1Q8N1I8 211 aa10.19□□□□□ -0.78
PTPRK-220ENST00000531466 PIK3R5Q8WYR1 880 aa10.19□□□□□ -0.78
PTPRK-220ENST00000531466 CD97P48960 835 aa10.18□□□□□ -0.78
PTPRK-220ENST00000531466 FAM69CQ0P6D2 419 aa10.18□□□□□ -0.78
PTPRK-220ENST00000531466 HYAL2Q12891 473 aa10.18□□□□□ -0.78
PTPRK-220ENST00000531466 NAA30Q147X3 362 aaPredicted RBP10.18□□□□□ -0.78
PTPRK-220ENST00000531466 CEP135Q66GS9 1140 aa10.18□□□□□ -0.78
PTPRK-220ENST00000531466 ACAD11Q709F0 780 aa10.18□□□□□ -0.78
PTPRK-220ENST00000531466 STK32AQ8WU08 396 aa10.18□□□□□ -0.78
PTPRK-220ENST00000531466 CARD10Q9BWT7 1032 aa10.18□□□□□ -0.78
PTPRK-220ENST00000531466 KCNK4Q9NYG8 393 aa10.18□□□□□ -0.78
PTPRK-220ENST00000531466 STOML1Q9UBI4 398 aa10.18□□□□□ -0.78
PTPRK-220ENST00000531466 SPACA7Q96KW9 195 aa10.17□□□□□ -0.78
PTPRK-220ENST00000531466 SMNDC1O75940 238 aaKnown RBP eCLIP10.16□□□□□ -0.78
PTPRK-220ENST00000531466 IGLV1-40P01703 118 aa10.16□□□□□ -0.78
PTPRK-220ENST00000531466 CDC27P30260 824 aa10.16□□□□□ -0.78
PTPRK-220ENST00000531466 CD68P34810 354 aaPredicted RBP10.16□□□□□ -0.78
PTPRK-220ENST00000531466 SCNN1AP37088 669 aa10.16□□□□□ -0.78
PTPRK-220ENST00000531466 ZAP70P43403 619 aa10.16□□□□□ -0.78
PTPRK-220ENST00000531466 TTC39BQ5VTQ0 682 aaPredicted RBP10.16□□□□□ -0.78
PTPRK-220ENST00000531466 ADAMTSL4Q6UY14 1074 aa10.16□□□□□ -0.78
PTPRK-220ENST00000531466 RASSF4Q9H2L5 321 aa10.16□□□□□ -0.78
PTPRK-220ENST00000531466 FAM13BQ9NYF5 915 aa10.16□□□□□ -0.78
PTPRK-220ENST00000531466 MED26O95402 600 aa10.15□□□□□ -0.78
PTPRK-220ENST00000531466 TGFB1P01137 390 aa10.15□□□□□ -0.78
PTPRK-220ENST00000531466 KRTAP19-1Q8IUB9 90 aa10.15□□□□□ -0.78
PTPRK-220ENST00000531466 ARMC10Q8N2F6 343 aa10.15□□□□□ -0.78
PTPRK-220ENST00000531466 GPR152Q8TDT2 470 aa10.15□□□□□ -0.78
PTPRK-220ENST00000531466 COL26A1Q96A83 441 aa10.15□□□□□ -0.78
PTPRK-220ENST00000531466 GSC2O15499 205 aa10.14□□□□□ -0.79
PTPRK-220ENST00000531466 DHX15O43143 795 aaKnown RBP10.14□□□□□ -0.79
PTPRK-220ENST00000531466 CYP2E1P05181 493 aaPredicted RBP10.14□□□□□ -0.79
PTPRK-220ENST00000531466 CEP41Q9BYV8 373 aa10.14□□□□□ -0.79
PTPRK-220ENST00000531466 CXXC1Q9P0U4 656 aaPredicted RBP10.14□□□□□ -0.79
PTPRK-220ENST00000531466 ELOAQ14241 798 aaKnown RBP10.13□□□□□ -0.79
PTPRK-220ENST00000531466 UTP4Q969X6 686 aaKnown RBP10.13□□□□□ -0.79
PTPRK-220ENST00000531466 SH2B1Q9NRF2 756 aaPredicted RBP10.13□□□□□ -0.79
PTPRK-220ENST00000531466 FNDC3AQ9Y2H6 1198 aaKnown RBP10.13□□□□□ -0.79
PTPRK-220ENST00000531466 TM4SF5O14894 197 aa10.12□□□□□ -0.79
PTPRK-220ENST00000531466 FSCN2O14926 492 aa10.12□□□□□ -0.79
PTPRK-220ENST00000531466 ZBTB39O15060 712 aa10.12□□□□□ -0.79
PTPRK-220ENST00000531466 COBLO75128 1261 aa10.12□□□□□ -0.79
PTPRK-220ENST00000531466 KIAA1211Q6ZU35 1233 aa10.12□□□□□ -0.79
PTPRK-220ENST00000531466 DDX3YO15523 660 aaKnown RBP10.11□□□□□ -0.79
PTPRK-220ENST00000531466 EPHA1P21709 976 aa10.11□□□□□ -0.79
PTPRK-220ENST00000531466 PBX4Q9BYU1 374 aa10.11□□□□□ -0.79
PTPRK-220ENST00000531466 GOLGA2P5Q9HBQ8 144 aa10.11□□□□□ -0.79
PTPRK-220ENST00000531466 COL17A1Q9UMD9 1497 aaPredicted RBP10.1□□□□□ -0.79
PTPRK-220ENST00000531466 KIF4AO95239 1232 aa10.1□□□□□ -0.79
PTPRK-220ENST00000531466 DUOXA2Q1HG44 320 aa10.1□□□□□ -0.79
PTPRK-220ENST00000531466 FAM117BQ6P1L5 589 aa10.1□□□□□ -0.79
PTPRK-220ENST00000531466 NCAPG2Q86XI2 1143 aa10.1□□□□□ -0.79
PTPRK-220ENST00000531466 TRIM42Q8IWZ5 723 aa10.1□□□□□ -0.79
PTPRK-220ENST00000531466 UBASH3BQ8TF42 649 aa10.1□□□□□ -0.79
PTPRK-220ENST00000531466 FOXD4L4Q8WXT5 416 aaPredicted RBP10.1□□□□□ -0.79
PTPRK-220ENST00000531466 C7orf69Q9H7B7 122 aa10.1□□□□□ -0.79
PTPRK-220ENST00000531466 ABI2Q9NYB9 513 aaPredicted RBP10.1□□□□□ -0.79
PTPRK-220ENST00000531466 STIM2Q9P246 746 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms