RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 FBXW10Q5XX13 1052 aa16.41■□□□□ 0.22
PCF11-204ENST00000530660 NUTM1Q86Y26 1132 aa16.41■□□□□ 0.22
PCF11-204ENST00000530660 WDR24Q96S15 920 aa16.41■□□□□ 0.22
PCF11-204ENST00000530660 LMTK2Q8IWU2 1503 aa16.41■□□□□ 0.22
PCF11-204ENST00000530660 GOLGA8FQ08AF8 430 aa16.4■□□□□ 0.22
PCF11-204ENST00000530660 GOLGA8DPQ0D2H9 430 aa16.4■□□□□ 0.22
PCF11-204ENST00000530660 RSRC2Q7L4I2 434 aaKnown RBP16.4■□□□□ 0.22
PCF11-204ENST00000530660 CCDC150Q8NCX0 1101 aa16.4■□□□□ 0.22
PCF11-204ENST00000530660 SGSM3Q96HU1 749 aa16.4■□□□□ 0.22
PCF11-204ENST00000530660 FMNL2Q96PY5 1086 aa16.4■□□□□ 0.22
PCF11-204ENST00000530660 CNNM3Q8NE01 707 aa16.4■□□□□ 0.22
PCF11-204ENST00000530660 DDX11Q96FC9 970 aa16.4■□□□□ 0.22
PCF11-204ENST00000530660 TCEANC2Q96MN5 208 aa16.4■□□□□ 0.22
PCF11-204ENST00000530660 PNMA6EA0A0J9YXQ4 647 aa16.4■□□□□ 0.22
PCF11-204ENST00000530660 HNRNPH1P31943 449 aaKnown RBP16.4■□□□□ 0.22
PCF11-204ENST00000530660 VPS53Q5VIR6 699 aa16.4■□□□□ 0.22
PCF11-204ENST00000530660 UTP14AQ9BVJ6 771 aaKnown RBP16.4■□□□□ 0.22
PCF11-204ENST00000530660 IMPACTQ9P2X3 320 aa16.4■□□□□ 0.22
PCF11-204ENST00000530660 ZRANB1Q9UGI0 708 aa16.4■□□□□ 0.22
PCF11-204ENST00000530660 CHD1O14646 1710 aa16.39■□□□□ 0.21
PCF11-204ENST00000530660 GOLIM4O00461 696 aa16.39■□□□□ 0.21
PCF11-204ENST00000530660 SLC4A2P04920 1241 aa16.39■□□□□ 0.21
PCF11-204ENST00000530660 PTPN21Q16825 1174 aa16.39■□□□□ 0.21
PCF11-204ENST00000530660 KCNV1Q6PIU1 500 aa16.39■□□□□ 0.21
PCF11-204ENST00000530660 DLG5Q8TDM6 1919 aa16.39■□□□□ 0.21
PCF11-204ENST00000530660 A0A087WUV0 522 aaPredicted RBP16.39■□□□□ 0.21
PCF11-204ENST00000530660 RPAINQ86UA6 219 aa16.39■□□□□ 0.21
PCF11-204ENST00000530660 ARAP3Q8WWN8 1544 aa16.39■□□□□ 0.21
PCF11-204ENST00000530660 PRPF40BQ6NWY9 871 aaKnown RBP16.39■□□□□ 0.21
PCF11-204ENST00000530660 SH2B1Q9NRF2 756 aaPredicted RBP16.39■□□□□ 0.21
PCF11-204ENST00000530660 ADCY9O60503 1353 aa16.38■□□□□ 0.21
PCF11-204ENST00000530660 CCDC196A0A1B0GTZ2 297 aa16.38■□□□□ 0.21
PCF11-204ENST00000530660 CCDC151A5D8V7 595 aa16.38■□□□□ 0.21
PCF11-204ENST00000530660 ERLIN2O94905 339 aa16.38■□□□□ 0.21
PCF11-204ENST00000530660 TUBB4AP04350 444 aa16.38■□□□□ 0.21
PCF11-204ENST00000530660 RABGGTAQ92696 567 aa16.38■□□□□ 0.21
PCF11-204ENST00000530660 CCDC102AQ96A19 550 aa16.38■□□□□ 0.21
PCF11-204ENST00000530660 GNG11P61952 73 aa16.37■□□□□ 0.21
PCF11-204ENST00000530660 MAP3K9P80192 1104 aa16.37■□□□□ 0.21
PCF11-204ENST00000530660 RRS1Q15050 365 aaKnown RBP16.37■□□□□ 0.21
PCF11-204ENST00000530660 MCM10Q7L590 875 aa16.37■□□□□ 0.21
PCF11-204ENST00000530660 G2E3Q7L622 706 aa16.37■□□□□ 0.21
PCF11-204ENST00000530660 CEP57L1Q8IYX8 460 aa16.37■□□□□ 0.21
PCF11-204ENST00000530660 ZSCAN31Q96LW9 406 aaPredicted RBP16.37■□□□□ 0.21
PCF11-204ENST00000530660 MAP2P11137 1827 aaKnown RBP16.37■□□□□ 0.21
PCF11-204ENST00000530660 BEND6Q5SZJ8 279 aaPredicted RBP16.37■□□□□ 0.21
PCF11-204ENST00000530660 LRCH2Q5VUJ6 765 aa16.37■□□□□ 0.21
PCF11-204ENST00000530660 CLIC6Q96NY7 704 aa16.37■□□□□ 0.21
PCF11-204ENST00000530660 FTOQ9C0B1 505 aaKnown RBP eCLIP16.37■□□□□ 0.21
PCF11-204ENST00000530660 GOLPH3LQ9H4A5 285 aa16.37■□□□□ 0.21
PCF11-204ENST00000530660 CYP46A1Q9Y6A2 500 aa16.37■□□□□ 0.21
PCF11-204ENST00000530660 IRF6O14896 467 aa16.37■□□□□ 0.21
PCF11-204ENST00000530660 NRDCO43847 1150 aa16.37■□□□□ 0.21
PCF11-204ENST00000530660 TXLNAP40222 546 aa16.37■□□□□ 0.21
PCF11-204ENST00000530660 PTH1RQ03431 593 aa16.37■□□□□ 0.21
PCF11-204ENST00000530660 ANO10Q9NW15 660 aa16.37■□□□□ 0.21
PCF11-204ENST00000530660 STAP2Q9UGK3 403 aa16.37■□□□□ 0.21
PCF11-204ENST00000530660 NEXMIFQ5QGS0 1516 aa16.36■□□□□ 0.21
PCF11-204ENST00000530660 KIF20BQ96Q89 1820 aa16.36■□□□□ 0.21
PCF11-204ENST00000530660 PPFIA4O75335 1185 aa16.36■□□□□ 0.21
PCF11-204ENST00000530660 STK3Q13188 491 aa16.36■□□□□ 0.21
PCF11-204ENST00000530660 JPH2Q9BR39 696 aaPredicted RBP16.36■□□□□ 0.21
PCF11-204ENST00000530660 RAI14Q9P0K7 980 aa16.36■□□□□ 0.21
PCF11-204ENST00000530660 MRFAP1Q9Y605 127 aa16.36■□□□□ 0.21
PCF11-204ENST00000530660 PTPRMP28827 1452 aa16.36■□□□□ 0.21
PCF11-204ENST00000530660 VWA3AA6NCI4 1184 aa16.36■□□□□ 0.21
PCF11-204ENST00000530660 CCAR1Q8IX12 1150 aaKnown RBP16.36■□□□□ 0.21
PCF11-204ENST00000530660 MIS18AQ9NYP9 233 aa16.36■□□□□ 0.21
PCF11-204ENST00000530660 PPP6R1Q9UPN7 881 aa16.36■□□□□ 0.21
PCF11-204ENST00000530660 KCNJ6P48051 423 aa16.35■□□□□ 0.21
PCF11-204ENST00000530660 HSP90AB3PQ58FF7 597 aa16.35■□□□□ 0.21
PCF11-204ENST00000530660 FAM43BQ6ZT52 329 aaPredicted RBP16.35■□□□□ 0.21
PCF11-204ENST00000530660 NME9Q86XW9 330 aa16.35■□□□□ 0.21
PCF11-204ENST00000530660 GOLGA1Q92805 767 aa16.35■□□□□ 0.21
PCF11-204ENST00000530660 DHX58Q96C10 678 aa16.35■□□□□ 0.21
PCF11-204ENST00000530660 FAM204AQ9H8W3 233 aa16.35■□□□□ 0.21
PCF11-204ENST00000530660 KIDINS220Q9ULH0 1771 aa16.35■□□□□ 0.21
PCF11-204ENST00000530660 EXOC5O00471 708 aa16.35■□□□□ 0.21
PCF11-204ENST00000530660 HDXQ7Z353 690 aa16.35■□□□□ 0.21
PCF11-204ENST00000530660 PDCP20941 246 aa16.35■□□□□ 0.21
PCF11-204ENST00000530660 ABCA9Q8IUA7 1624 aa16.35■□□□□ 0.21
PCF11-204ENST00000530660 CPSF1Q10570 1443 aaKnown RBP16.35■□□□□ 0.21
PCF11-204ENST00000530660 PNKPQ96T60 521 aa16.34■□□□□ 0.21
PCF11-204ENST00000530660 CPLX2Q6PUV4 134 aaKnown RBP16.34■□□□□ 0.21
PCF11-204ENST00000530660 ZSWIM6Q9HCJ5 1215 aa16.34■□□□□ 0.21
PCF11-204ENST00000530660 ABCB6Q9NP58 842 aa16.34■□□□□ 0.21
PCF11-204ENST00000530660 DHX8Q14562 1220 aaKnown RBP16.34■□□□□ 0.21
PCF11-204ENST00000530660 BRD3Q15059 726 aa16.34■□□□□ 0.21
PCF11-204ENST00000530660 DPCR1Q3MIW9 517 aa16.34■□□□□ 0.21
PCF11-204ENST00000530660 PUF60Q9UHX1 559 aaKnown RBP16.34■□□□□ 0.21
PCF11-204ENST00000530660 CHL1O00533 1208 aa16.33■□□□□ 0.2
PCF11-204ENST00000530660 EPB41L2O43491 1005 aaKnown RBP16.33■□□□□ 0.2
PCF11-204ENST00000530660 ECM2O94769 699 aaPredicted RBP16.33■□□□□ 0.2
PCF11-204ENST00000530660 GNAI2P04899 355 aa16.33■□□□□ 0.2
PCF11-204ENST00000530660 ANKZF1Q9H8Y5 726 aa16.33■□□□□ 0.2
PCF11-204ENST00000530660 EIF5P55010 431 aaKnown RBP16.33■□□□□ 0.2
PCF11-204ENST00000530660 IDI1Q13907 227 aa16.33■□□□□ 0.2
PCF11-204ENST00000530660 CEP120Q8N960 986 aa16.33■□□□□ 0.2
PCF11-204ENST00000530660 MPHOSPH8Q99549 860 aa16.33■□□□□ 0.2
PCF11-204ENST00000530660 PSME1Q06323 249 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms