RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 SMG9Q9H0W8 520 aaKnown RBP8.36□□□□□ -1.07
C11orf88-204ENST00000529661 GGNBP2Q9H3C7 697 aa8.36□□□□□ -1.07
C11orf88-204ENST00000529661 TMEM63CQ9P1W3 806 aa8.36□□□□□ -1.07
C11orf88-204ENST00000529661 EGFL7Q9UHF1 273 aa8.36□□□□□ -1.07
C11orf88-204ENST00000529661 SPDYE3A6NKU9 549 aa8.35□□□□□ -1.07
C11orf88-204ENST00000529661 FAM229AH3BQW9 127 aa8.35□□□□□ -1.07
C11orf88-204ENST00000529661 GHRHP01286 108 aa8.35□□□□□ -1.07
C11orf88-204ENST00000529661 NID1P14543 1247 aa8.35□□□□□ -1.07
C11orf88-204ENST00000529661 AFF1P51825 1210 aaKnown RBP8.35□□□□□ -1.07
C11orf88-204ENST00000529661 COL9A3Q14050 684 aaPredicted RBP8.35□□□□□ -1.07
C11orf88-204ENST00000529661 TRAPPC3LQ5T215 181 aa8.35□□□□□ -1.07
C11orf88-204ENST00000529661 ALYREFQ86V81 257 aaKnown RBP8.35□□□□□ -1.07
C11orf88-204ENST00000529661 OR13H1Q8NG92 308 aa8.35□□□□□ -1.07
C11orf88-204ENST00000529661 SPOCK3Q9BQ16 436 aa8.35□□□□□ -1.07
C11orf88-204ENST00000529661 FZD6O60353 706 aa8.34□□□□□ -1.07
C11orf88-204ENST00000529661 PROCP04070 461 aa8.34□□□□□ -1.07
C11orf88-204ENST00000529661 PRRT3Q5FWE3 981 aa8.34□□□□□ -1.07
C11orf88-204ENST00000529661 TXNDC2Q86VQ3 553 aa8.34□□□□□ -1.07
C11orf88-204ENST00000529661 CCER1Q8TC90 406 aaPredicted RBP8.34□□□□□ -1.07
C11orf88-204ENST00000529661 PLD4Q96BZ4 506 aa8.34□□□□□ -1.07
C11orf88-204ENST00000529661 RBSNQ9H1K0 784 aa8.34□□□□□ -1.07
C11orf88-204ENST00000529661 CCDC87Q9NVE4 849 aa8.34□□□□□ -1.07
C11orf88-204ENST00000529661 FRRS1LQ9P0K9 344 aa8.34□□□□□ -1.07
C11orf88-204ENST00000529661 CYP2E1P05181 493 aaPredicted RBP8.33□□□□□ -1.08
C11orf88-204ENST00000529661 HOXD8P13378 290 aaPredicted RBP8.33□□□□□ -1.08
C11orf88-204ENST00000529661 HYAL2Q12891 473 aa8.33□□□□□ -1.08
C11orf88-204ENST00000529661 COL13A1Q5TAT6 717 aaPredicted RBP8.33□□□□□ -1.08
C11orf88-204ENST00000529661 MSTNO14793 375 aa8.32□□□□□ -1.08
C11orf88-204ENST00000529661 BRD1O95696 1058 aa8.32□□□□□ -1.08
C11orf88-204ENST00000529661 USP5P45974 858 aa8.32□□□□□ -1.08
C11orf88-204ENST00000529661 SPACA7Q96KW9 195 aa8.32□□□□□ -1.08
C11orf88-204ENST00000529661 PODXL2Q9NZ53 605 aa8.32□□□□□ -1.08
C11orf88-204ENST00000529661 CNTN3Q9P232 1028 aa8.32□□□□□ -1.08
C11orf88-204ENST00000529661 KANSL3Q9P2N6 904 aa8.32□□□□□ -1.08
C11orf88-204ENST00000529661 SPATA31C1P0DKV0 1188 aa8.31□□□□□ -1.08
C11orf88-204ENST00000529661 TRIM28Q13263 835 aaKnown RBP8.31□□□□□ -1.08
C11orf88-204ENST00000529661 GDF6Q6KF10 455 aaPredicted RBP8.31□□□□□ -1.08
C11orf88-204ENST00000529661 NCAPG2Q86XI2 1143 aa8.31□□□□□ -1.08
C11orf88-204ENST00000529661 DMRTC2Q8IXT2 367 aaPredicted RBP8.31□□□□□ -1.08
C11orf88-204ENST00000529661 BRPF3Q9ULD4 1205 aa8.31□□□□□ -1.08
C11orf88-204ENST00000529661 CES1P23141 567 aa8.3□□□□□ -1.08
C11orf88-204ENST00000529661 RAC1P63000 192 aa8.3□□□□□ -1.08
C11orf88-204ENST00000529661 GRIK5Q16478 980 aa8.3□□□□□ -1.08
C11orf88-204ENST00000529661 XKR5Q6UX68 686 aa8.3□□□□□ -1.08
C11orf88-204ENST00000529661 WFDC8Q8IUA0 241 aa8.3□□□□□ -1.08
C11orf88-204ENST00000529661 C1orf127Q8N9H9 656 aa8.3□□□□□ -1.08
C11orf88-204ENST00000529661 ARHGAP4P98171 946 aa8.29□□□□□ -1.08
C11orf88-204ENST00000529661 EHHADHQ08426 723 aa8.29□□□□□ -1.08
C11orf88-204ENST00000529661 SUZ12Q15022 739 aaKnown RBP8.29□□□□□ -1.08
C11orf88-204ENST00000529661 MSL1Q68DK7 614 aa8.29□□□□□ -1.08
C11orf88-204ENST00000529661 TRIM33Q9UPN9 1127 aa8.29□□□□□ -1.08
C11orf88-204ENST00000529661 A0A0A0MRY4 1105 aa8.28□□□□□ -1.08
C11orf88-204ENST00000529661 NDUFB5O43674 189 aa8.28□□□□□ -1.08
C11orf88-204ENST00000529661 PHACTR2O75167 634 aa8.28□□□□□ -1.08
C11orf88-204ENST00000529661 CHRNA4P43681 627 aa8.28□□□□□ -1.08
C11orf88-204ENST00000529661 ATP11AP98196 1134 aa8.28□□□□□ -1.08
C11orf88-204ENST00000529661 ECM1Q16610 540 aa8.28□□□□□ -1.08
C11orf88-204ENST00000529661 GJD3Q8N144 294 aa8.28□□□□□ -1.08
C11orf88-204ENST00000529661 TTC9Q92623 222 aa8.28□□□□□ -1.08
C11orf88-204ENST00000529661 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.28□□□□□ -1.08
C11orf88-204ENST00000529661 C1QTNF9BB2RNN3 333 aa8.27□□□□□ -1.09
C11orf88-204ENST00000529661 TNFRSF21O75509 655 aa8.27□□□□□ -1.09
C11orf88-204ENST00000529661 APBA3O96018 575 aa8.27□□□□□ -1.09
C11orf88-204ENST00000529661 CEP135Q66GS9 1140 aa8.27□□□□□ -1.09
C11orf88-204ENST00000529661 CD163Q86VB7 1156 aa8.27□□□□□ -1.09
C11orf88-204ENST00000529661 SNX29Q8TEQ0 813 aa8.27□□□□□ -1.09
C11orf88-204ENST00000529661 RASSF4Q9H2L5 321 aa8.27□□□□□ -1.09
C11orf88-204ENST00000529661 BIN2Q9UBW5 565 aaPredicted RBP8.27□□□□□ -1.09
C11orf88-204ENST00000529661 FOXD3Q9UJU5 478 aaPredicted RBP8.27□□□□□ -1.09
C11orf88-204ENST00000529661 ZBTB7CA1YPR0 619 aa8.26□□□□□ -1.09
C11orf88-204ENST00000529661 SOWAHDA6NJG2 315 aa8.26□□□□□ -1.09
C11orf88-204ENST00000529661 SMNDC1O75940 238 aaKnown RBP eCLIP8.26□□□□□ -1.09
C11orf88-204ENST00000529661 KIF4AO95239 1232 aa8.26□□□□□ -1.09
C11orf88-204ENST00000529661 GRIK4Q16099 956 aa8.26□□□□□ -1.09
C11orf88-204ENST00000529661 IL22RA1Q8N6P7 574 aa8.26□□□□□ -1.09
C11orf88-204ENST00000529661 LACRTQ9GZZ8 138 aa8.26□□□□□ -1.09
C11orf88-204ENST00000529661 CHRDQ9H2X0 955 aa8.26□□□□□ -1.09
C11orf88-204ENST00000529661 GNEQ9Y223 722 aaKnown RBP8.26□□□□□ -1.09
C11orf88-204ENST00000529661 EREGO14944 169 aa8.25□□□□□ -1.09
C11orf88-204ENST00000529661 CEP120Q8N960 986 aa8.25□□□□□ -1.09
C11orf88-204ENST00000529661 TMC1Q8TDI8 760 aa8.25□□□□□ -1.09
C11orf88-204ENST00000529661 PMEPA1Q969W9 287 aa8.25□□□□□ -1.09
C11orf88-204ENST00000529661 ACPPP15309 386 aa8.24□□□□□ -1.09
C11orf88-204ENST00000529661 ELNP15502 786 aa8.24□□□□□ -1.09
C11orf88-204ENST00000529661 FMR1NBQ8N0W7 255 aaPredicted RBP8.24□□□□□ -1.09
C11orf88-204ENST00000529661 PBX4Q9BYU1 374 aa8.24□□□□□ -1.09
C11orf88-204ENST00000529661 SALL4Q9UJQ4 1053 aa8.24□□□□□ -1.09
C11orf88-204ENST00000529661 IVNS1ABPQ9Y6Y0 642 aa8.24□□□□□ -1.09
C11orf88-204ENST00000529661 BAG6P46379 1132 aa8.23□□□□□ -1.09
C11orf88-204ENST00000529661 NACC1Q96RE7 527 aa8.23□□□□□ -1.09
C11orf88-204ENST00000529661 TRPA1O75762 1119 aa8.22□□□□□ -1.09
C11orf88-204ENST00000529661 CDC25BP30305 580 aa8.22□□□□□ -1.09
C11orf88-204ENST00000529661 PDE3BQ13370 1112 aa8.22□□□□□ -1.09
C11orf88-204ENST00000529661 SHISA2Q6UWI4 295 aa8.22□□□□□ -1.09
C11orf88-204ENST00000529661 DTWD1Q8N5C7 304 aa8.22□□□□□ -1.09
C11orf88-204ENST00000529661 AMOTL2Q9Y2J4 779 aa8.22□□□□□ -1.09
C11orf88-204ENST00000529661 FAM177BA6PVY3 158 aa8.21□□□□□ -1.1
C11orf88-204ENST00000529661 POLR3DP05423 398 aaPredicted RBP8.21□□□□□ -1.1
C11orf88-204ENST00000529661 EDN3P14138 238 aa8.21□□□□□ -1.1
C11orf88-204ENST00000529661 SELPP16109 830 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms